FFCP PHASE1:Hg19::chr6:118228389..118228435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222553 | |EntrezGene=222553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21483 | |HGNC=21483 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T1Q4 | |UniProt=Q5T1Q4 | ||
|association_with_transcript=-253bp_to_ENST00000360388,NM_001029858,uc003pxx.3_5end | |association_with_transcript=-253bp_to_ENST00000360388,NM_001029858,uc003pxx.3_5end | ||
|cluster_id=chr6:118228389..118228435,+ | |||
|coexpression_cluster_id=C1198 | |||
|description=CAGE_peak_1_at_SLC35F1_5end | |description=CAGE_peak_1_at_SLC35F1_5end | ||
|id=chr6:118228389..118228435,+ | |id=chr6:118228389..118228435,+ | ||
|ontology_enrichment_celltype=CL:0000047!3.66e-09!8;CL:0000540!7.13e-07!6;CL:0000031!7.13e-07!6;CL:0000404!7.13e-07!6 | |ontology_enrichment_celltype=CL:0000047!3.66e-09!8;CL:0000540!7.13e-07!6;CL:0000031!7.13e-07!6;CL:0000404!7.13e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.52e-09;25!CL:0000540;1.03e-08;6!CL:0000404;1.03e-08;6!CL:0002322;6.85e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.87e-12,8;CL:0002319,3.50e-09,25;CL:0000540,1.04e-08,6;CL:0000031,1.04e-08,6;CL:0000404,1.04e-08,6;CL:0002322,6.96e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.28e-16;82!CL:0000031;1.03e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.80e-62!86;UBERON:0000073!7.68e-61!94;UBERON:0001016!7.68e-61!94;UBERON:0007023!1.77e-60!115;UBERON:0001017!1.36e-59!82;UBERON:0001049!2.12e-56!57;UBERON:0005068!2.12e-56!57;UBERON:0006241!2.12e-56!57;UBERON:0007135!2.12e-56!57;UBERON:0002346!3.01e-51!90;UBERON:0003075!1.74e-50!86;UBERON:0007284!1.74e-50!86;UBERON:0002616!2.34e-48!59;UBERON:0000955!1.01e-46!69;UBERON:0006238!1.01e-46!69;UBERON:0003080!1.57e-44!42;UBERON:0002780!8.59e-44!41;UBERON:0001890!8.59e-44!41;UBERON:0006240!8.59e-44!41;UBERON:0001893!2.71e-38!34;UBERON:0003056!2.74e-38!61;UBERON:0002020!3.68e-38!34;UBERON:0003528!3.68e-38!34;UBERON:0002791!3.71e-37!33;UBERON:0001869!1.58e-36!32;UBERON:0000924!4.38e-36!173;UBERON:0006601!4.38e-36!173;UBERON:0004121!5.75e-35!169;UBERON:0000153!5.38e-31!129;UBERON:0007811!5.38e-31!129;UBERON:0000033!9.19e-31!123;UBERON:0000956!4.22e-29!25;UBERON:0000203!4.22e-29!25;UBERON:0002619!1.34e-25!22;UBERON:0001950!1.18e-23!20;UBERON:0003076!1.12e-12!15;UBERON:0003057!1.12e-12!15;UBERON:0000025!5.97e-11!194;UBERON:0004732!1.12e-10!13;UBERON:0000064!1.74e-10!219;UBERON:0002420!1.90e-10!9;UBERON:0007245!1.90e-10!9;UBERON:0010009!1.90e-10!9;UBERON:0010011!1.90e-10!9;UBERON:0000454!1.90e-10!9;UBERON:0002308!2.15e-10!9;UBERON:0000125!2.15e-10!9;UBERON:0004733!7.53e-10!12;UBERON:0002028!7.53e-10!12;UBERON:0007277!7.53e-10!12;UBERON:0004111!1.03e-09!241;UBERON:0001871!1.14e-09!7;UBERON:0000922!2.26e-09!612;UBERON:0002298!1.45e-08!8;UBERON:0009663!1.55e-08!7;UBERON:0000477!2.46e-08!286;UBERON:0000200!4.23e-08!6;UBERON:0000481!4.38e-08!347;UBERON:0000468!2.17e-07!659;UBERON:0002680!3.20e-07!9;UBERON:0001895!3.20e-07!9;UBERON:0010092!3.20e-07!9;UBERON:0000062!4.18e-07!511;UBERON:0001872!4.56e-07!5;UBERON:0002050!5.41e-07!605;UBERON:0005423!5.41e-07!605;UBERON:0000475!5.96e-07!365;UBERON:0002021!6.03e-07!5;UBERON:0001894!6.48e-07!7;UBERON:0006222!6.48e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.01e-44;32!UBERON:0001893;6.17e-44;34!UBERON:0002791;6.17e-44;32!UBERON:0003528;7.58e-44;34!UBERON:0002020;7.58e-44;34!UBERON:0002780;9.97e-42;41!UBERON:0001890;9.97e-42;41!UBERON:0000073;1.31e-39;53!UBERON:0002616;1.31e-39;53!UBERON:0000956;1.22e-38;25!UBERON:0000203;1.22e-38;25!UBERON:0002619;6.52e-34;22!UBERON:0001950;2.79e-31;20!UBERON:0000955;2.39e-28;68!UBERON:0001017;2.23e-27;75!UBERON:0001016;4.90e-25;83!UBERON:0007023;6.01e-16;114!UBERON:0000922;7.07e-16;49!UBERON:0004732;5.51e-14;13!UBERON:0002420;1.62e-13;9!UBERON:0007245;1.62e-13;9!UBERON:0010009;1.62e-13;9!UBERON:0010011;1.62e-13;9!UBERON:0000454;1.62e-13;9!UBERON:0000125;1.84e-13;9!UBERON:0002308;1.84e-13;9!UBERON:0004733;7.21e-13;12!UBERON:0002028;7.21e-13;12!UBERON:0001871;5.17e-11;6!UBERON:0009663;5.82e-11;7!UBERON:0011216;1.84e-10;132!UBERON:0000200;2.35e-10;6!UBERON:0002680;2.49e-09;9!UBERON:0001895;2.49e-09;9!UBERON:0002298;5.74e-09;6!UBERON:0001872;5.99e-09;5!UBERON:0002021;8.43e-09;5!UBERON:0001894;9.40e-09;7!UBERON:0000349;3.61e-08;5!UBERON:0000369;2.03e-07;4!UBERON:0002435;2.03e-07;4!UBERON:0000204;2.03e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.82e-77,81;UBERON:0001049,1.18e-74,56;UBERON:0005068,1.18e-74,56;UBERON:0006241,1.18e-74,56;UBERON:0007135,1.18e-74,56;UBERON:0001016,3.57e-74,89;UBERON:0000073,1.96e-70,53;UBERON:0002616,1.96e-70,53;UBERON:0000955,8.50e-62,68;UBERON:0006238,8.50e-62,68;UBERON:0002780,1.89e-58,41;UBERON:0001890,1.89e-58,41;UBERON:0003080,1.89e-58,41;UBERON:0006240,1.89e-58,41;UBERON:0003075,2.27e-58,82;UBERON:0007284,2.27e-58,82;UBERON:0007023,1.37e-57,114;UBERON:0002346,1.08e-56,86;UBERON:0001893,4.97e-51,34;UBERON:0003528,7.52e-51,34;UBERON:0002020,7.52e-51,34;UBERON:0001869,1.20e-48,32;UBERON:0002791,3.07e-48,32;UBERON:0003056,2.00e-44,61;UBERON:0010371,4.02e-43,104;UBERON:0000956,1.25e-38,25;UBERON:0000203,1.25e-38,25;UBERON:0004121,1.66e-38,171;UBERON:0000924,1.66e-38,171;UBERON:0006601,1.66e-38,171;UBERON:0011216,1.71e-37,223;UBERON:0010314,3.06e-34,132;UBERON:0002619,6.63e-34,22;UBERON:0001950,2.77e-31,20;UBERON:0003076,1.06e-16,15;UBERON:0003057,1.06e-16,15;UBERON:0000025,7.90e-16,192;UBERON:0004732,5.25e-14,13;UBERON:0002420,1.68e-13,9;UBERON:0007245,1.68e-13,9;UBERON:0010009,1.68e-13,9;UBERON:0010011,1.68e-13,9;UBERON:0000454,1.68e-13,9;UBERON:0000125,1.97e-13,9;UBERON:0002308,1.97e-13,9;UBERON:0004111,3.88e-13,240;UBERON:0004733,6.80e-13,12;UBERON:0002028,6.80e-13,12;UBERON:0007277,6.80e-13,12;UBERON:0000922,1.57e-12,592;UBERON:0001871,5.22e-11,6;UBERON:0009663,6.15e-11,7;UBERON:0000200,2.37e-10,6;UBERON:0002050,6.94e-10,564;UBERON:0000923,1.06e-09,560;UBERON:0010316,1.06e-09,560;UBERON:0005291,1.06e-09,560;UBERON:0006598,1.06e-09,560;UBERON:0010317,1.06e-09,560;UBERON:0002532,1.06e-09,560;UBERON:0005423,1.28e-09,581;UBERON:0002680,2.33e-09,9;UBERON:0001895,2.33e-09,9;UBERON:0010092,2.33e-09,9;UBERON:0001872,5.73e-09,5;UBERON:0002298,5.92e-09,6;UBERON:0002021,8.32e-09,5;UBERON:0001894,9.18e-09,7;UBERON:0006222,9.18e-09,7;UBERON:0000349,3.67e-08,5;UBERON:0000369,2.04e-07,4;UBERON:0002435,2.04e-07,4;UBERON:0000204,2.04e-07,4;UBERON:0010082,2.04e-07,4;UBERON:0000483,2.19e-07,306;UBERON:0000119,3.81e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83178433576612,0,4.38836610069323,61.8269732203083,36.5454714944601,58.6284126907729,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0.850813354476611,0.221729397462564,0.263504357079378,7.07287007687648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,5.85473789422058,5.83130980614535,5.34492137199785,9.22583389636797,3.28017106138317,6.56959246336494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,21.7949161353144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0.514137463516618,0,2.28661146104463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,83.0889421207455,45.5489488501676,24.7452420088863,28.6452813721736,14.6725912880228,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82095137628028,0.656029291399411,0.976135183992909,0.412164046590889,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,6.73735898684351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0.540911356951966,0,0,0,2.78365540616599,0.121360521749513,0,0,0,0,0,12.9239194209619,23.2104537077346,0.222617410045812,0,0,0.597743964753209,2.76283915531148,0.755798243562828,0,0,0,0,0,0,1.28236427328014,0,0,28.1106496367613,24.8618503073761,57.8880014203463,0,0,3.62499787717397,0,0,0,6.20538071834636,1.74962768029953,7.98674976693144,25.6865001886013,33.6464063764888,10.6807215421958,10.7261882133288,8.57088094965288,22.5966959068592,0,0,2.15460723810632,2.62066728448103,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0.995261931078505,3.53830258013357,2.4441205797345,10.0817183751411,1.60633120630454,1.77517314159274,11.8625994045992,4.81546588379273,14.7586600806964,0,0,0,1.18375320854817,7.25944296291983,24.1797481688087,0.821425535170343,0.300646838828985,0.518440956986236,0,0,0.941798755221676,0,0,0,0,0,0,3.66926003308263,0,0,0,0,3.10364852762942,0,18.0784592624426,0,0,30.1992496709541,0,0,1.49417096317547,0,0,0,0.343189995723929,0,0.49701014226173,0,0,0,0,0,15.0105072177447,11.7738625847114,0,0,0,0.837847203816763,2.7499250881402,1.43574604915363,0.199679000498991,0.429226048136571,1.11585728720936,3.09043973438941,0,0,0,0,0,0,0,15.1093641063768,20.7029177289595,3.3758161177654,6.05173521027829,5.81616473240859,0,0,25.6363129096864,0,0.236417121897595,3.88163952198986,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,16.9360672833631,12.0331667585848,0,0,0.640724475406168,4.71612915298998,0,0,0,0,0,0.544017803369474,0.7520696820681,0.612691153526923,0.327872630709804,0,29.2402499389105,29.4083298413731,29.4198687160275,10.3213655224213,10.0945436898536,13.2886302294561,5.53394539744923,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,32.7672493679602,0,0,0,0.327609848846413,1.72041036127604,0,0,1.60037594541211,0,0,0,0,1.86623178009892,9.46418347647022,0,18.242849255284,0.436838552768056,0.169732529954025,5.95209776284712,0,0,0,0,1.60114149657094,0,0,25.6274608134873,29.7562810283728,23.1469095632869,29.331640086428,36.8024676483708,27.4554292282945,31.1647996069473,7.13847101295772,0,0.943757786781923,0,0,0,0,0,1.95546853708069,0,0,0,0,0,30.3243754936592,30.4620458459401,30.5896458821752,28.4736987770642,42.6640351034211,0.548257766857182,2.48105589194647,0.175871244359621,0,5.35701835878287,3.02655349996942,1.82089681270989,1.36597314810779,0,0.460935950223117,0,12.2345519358297,27.6903376699595,0,0,1.64835494986079,33.7798518319404,0,14.6105395281519,0,0,7.64799022690223,3.31828584638726,0,0,0,0,0,0,1.29068207646083,0,0,1.69354820076372,0.4582137370881,0,0,0,0,0,0,0.410651227424988,1.1598144313382,4.85710993059139,3.9769708788558,0,0,0.11294608203896,0.109940516745429,0,1.85217979459067,3.71551252856727,0,3.18692818280077,0,15.5083689020807,15.4464128170085,20.7101306515866,0,1.31577485171795,1.48253142339228,0,0,0,0,4.3820183294791,1.37618785021362,6.16360207551241,0,27.4005705469386,19.635781065317,5.81929524566941,0,0,0,4.92049056856808,3.05943601498347,0,0,0.26721740526556,0.0918948995348449,1.0028301571695,1.13668047327359,0.535928260312357,9.12086383404657,15.5149493792843,0.852935927603924,4.04709533488359,0,0.31037357147929,0,0.509177266225319,1.41482032270754,0.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| ||
|short_description=p1@SLC35F1 | |short_description=p1@SLC35F1 | ||
}} | }} |
Latest revision as of 02:30, 20 September 2015
Short description: | p1@SLC35F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC35F1_5end |
Coexpression cluster: | C1198_Neural_parietal_occipital_Astrocyte_brain_duodenum_temporal |
Association with transcript: | -253bp_to_ENST00000360388, NM_001029858, uc003pxx.3_5end |
EntrezGene: | SLC35F1 |
HGNC: | 21483 |
UniProt: | Q5T1Q4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.87e-12 | 8 |
neural cell | 3.50e-09 | 25 |
neuron | 1.04e-08 | 6 |
neuroblast | 1.04e-08 | 6 |
electrically signaling cell | 1.04e-08 | 6 |
embryonic stem cell | 6.96e-07 | 5 |