FFCP PHASE1:Hg19::chr2:216241256..216241335,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:216241256..216241335,-
|short_description=p10@FN1
|description=CAGE_peak_10_at_FN1_5end
|association_with_transcript=0bp_to_AK297733_5end
|EntrezGene=2335...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=B4DN21 | |UniProt=B4DN21 | ||
|association_with_transcript=0bp_to_AK297733_5end | |||
|cluster_id=chr2:216241256..216241335,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_10_at_FN1_5end | |||
|id=chr2:216241256..216241335,- | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-35!180;CL:0000057!3.84e-24!75;CL:0000680!7.87e-16!57;CL:0000056!7.87e-16!57;CL:0000355!7.87e-16!57;CL:0002371!3.22e-15!591;CL:0000183!4.93e-15!59;CL:0000187!1.71e-14!54;CL:0000144!1.80e-13!625;CL:0000220!7.18e-13!246;CL:0000222!1.16e-12!119;CL:0002321!1.75e-12!248;CL:0000393!7.91e-12!60;CL:0000211!7.91e-12!60;CL:0000192!4.92e-10!42;CL:0000514!4.92e-10!42;CL:0002620!5.07e-10!23;CL:0000359!1.18e-08!32;CL:0000548!3.41e-08!679;CL:0000004!3.41e-08!679;CL:0000255!3.41e-08!679;CL:0002334!4.85e-08!12;CL:0000012!1.22e-07!682;CL:0002494!1.53e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.13e-12;55!CL:0000057;5.44e-11;73!CL:0002620;6.80e-11;23!CL:0000723;7.40e-11;61!CL:0000048;4.87e-10;58!CL:0000349;1.19e-09;19!CL:0000187;1.63e-09;55!CL:0002320;4.74e-09;188!CL:0000359;5.81e-09;32!CL:0002334;9.73e-09;12!CL:0000192;2.39e-08;43!CL:0000034;2.40e-08;69!CL:0002494;3.54e-08;16!CL:0000499;2.25e-07;28!CL:0000393;3.39e-07;61!CL:0000211;3.39e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.67e-27,76;CL:0000680,7.29e-18,58;CL:0000056,7.29e-18,58;CL:0000355,7.29e-18,58;CL:0000187,2.25e-16,55;CL:0000048,9.30e-15,427;CL:0000723,1.85e-14,433;CL:0000034,1.13e-13,441;CL:0000393,9.50e-13,61;CL:0000211,9.50e-13,61;CL:0000222,2.48e-12,121;CL:0000192,2.05e-11,43;CL:0000514,2.05e-11,43;CL:0002620,6.39e-11,23;CL:0002321,1.07e-10,250;CL:0000349,1.17e-09,19;CL:0000359,2.07e-09,32;CL:0002334,9.90e-09,12;CL:0002494,3.53e-08,16;CL:0000499,1.95e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;1.07e-09;58!CL:0000514;2.39e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!7.29e-20!143;UBERON:0000914!2.49e-18!83;UBERON:0002329!2.49e-18!83;UBERON:0003077!2.49e-18!83;UBERON:0003059!2.49e-18!83;UBERON:0007282!2.49e-18!83;UBERON:0009618!2.49e-18!83;UBERON:0007285!2.49e-18!83;UBERON:0004290!2.29e-16!70;UBERON:0000486!6.15e-16!82;UBERON:0003914!1.18e-15!118;UBERON:0004872!1.61e-14!84;UBERON:0000490!1.71e-14!138;UBERON:0001134!4.30e-14!61;UBERON:0002036!4.30e-14!61;UBERON:0003082!4.30e-14!61;UBERON:0002385!6.85e-14!63;UBERON:0001015!6.85e-14!63;UBERON:0000383!6.85e-14!63;UBERON:0002100!1.40e-13!216;UBERON:0002049!8.17e-13!79;UBERON:0007798!8.17e-13!79;UBERON:0000468!2.19e-11!659;UBERON:0000475!6.42e-11!365;UBERON:0004535!1.36e-10!110;UBERON:0000119!1.39e-10!312;UBERON:0001009!1.77e-10!113;UBERON:0000483!3.61e-10!309;UBERON:0002199!3.78e-10!45;UBERON:0002416!3.78e-10!45;UBERON:0000055!5.85e-10!69;UBERON:0001637!6.07e-10!42;UBERON:0003509!6.07e-10!42;UBERON:0004572!6.07e-10!42;UBERON:0003102!9.31e-10!95;UBERON:0001981!1.52e-09!60;UBERON:0007500!1.52e-09!60;UBERON:0004537!1.52e-09!60;UBERON:0006965!1.52e-09!60;UBERON:0003104!2.69e-09!238;UBERON:0009142!2.69e-09!238;UBERON:0002097!1.21e-08!40;UBERON:0000481!2.98e-08!347;UBERON:0004923!3.37e-08!57;UBERON:0000948!8.48e-08!24;UBERON:0005498!8.48e-08!24;UBERON:0004140!8.48e-08!24;UBERON:0009881!8.48e-08!24;UBERON:0004141!8.48e-08!24;UBERON:0003084!8.48e-08!24;UBERON:0007005!8.48e-08!24;UBERON:0004139!8.48e-08!24;UBERON:0004291!8.48e-08!24;UBERON:0004573!9.05e-08!33;UBERON:0004571!9.05e-08!33;UBERON:0000467!9.56e-08!625;UBERON:0000480!1.43e-07!626;UBERON:0007100!2.86e-07!27;UBERON:0005631!5.74e-07!14;UBERON:0000158!5.74e-07!14;UBERON:0000478!8.51e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.18e-08;198!UBERON:0001637;3.86e-08;42!UBERON:0003509;3.86e-08;42!UBERON:0004572;3.86e-08;42!UBERON:0004573;7.53e-08;33!UBERON:0004571;7.53e-08;33!UBERON:0000478;9.19e-08;24!UBERON:0002199;1.25e-07;46!UBERON:0002416;1.25e-07;46!UBERON:0002097;1.58e-07;41!UBERON:0000948;3.92e-07;22 | |||
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| ||
|short_description=p10@FN1 | |||
}} | }} |
Latest revision as of 02:13, 20 September 2015
Short description: | p10@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 0bp_to_AK297733_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | B4DN21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.67e-27 | 76 |
muscle precursor cell | 7.29e-18 | 58 |
myoblast | 7.29e-18 | 58 |
multi-potent skeletal muscle stem cell | 7.29e-18 | 58 |
muscle cell | 2.25e-16 | 55 |
multi fate stem cell | 9.30e-15 | 427 |
somatic stem cell | 1.85e-14 | 433 |
stem cell | 1.13e-13 | 441 |
electrically responsive cell | 9.50e-13 | 61 |
electrically active cell | 9.50e-13 | 61 |
mesodermal cell | 2.48e-12 | 121 |
smooth muscle cell | 2.05e-11 | 43 |
smooth muscle myoblast | 2.05e-11 | 43 |
skin fibroblast | 6.39e-11 | 23 |
embryonic cell | 1.07e-10 | 250 |
extraembryonic cell | 1.17e-09 | 19 |
vascular associated smooth muscle cell | 2.07e-09 | 32 |
preadipocyte | 9.90e-09 | 12 |
cardiocyte | 3.53e-08 | 16 |
stromal cell | 1.95e-07 | 28 |