FFCP PHASE1:Hg19::chr1:99772462..99772471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9890 | |EntrezGene=9890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q3ZCT6 | |UniProt=Q3ZCT6 | ||
|association_with_transcript=246bp_to_BC041386_5end | |association_with_transcript=246bp_to_BC041386_5end | ||
|cluster_id=chr1:99772462..99772471,+ | |||
|description=CAGE_peak_8_at_LPPR4_5end | |description=CAGE_peak_8_at_LPPR4_5end | ||
|id=chr1:99772462..99772471,+ | |id=chr1:99772462..99772471,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.02e-08;3!UBERON:0003057;7.02e-08;3 | |ontology_enrichment_development_v019=UBERON:0006241;7.02e-08;3!UBERON:0003057;7.02e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;5.71e-21;1!DOID:3451;3.52e-11;2!DOID:4159;3.52e-11;2!DOID:0060122;3.52e-11;2 | |ontology_enrichment_disease_v019=DOID:2513;5.71e-21;1!DOID:3451;3.52e-11;2!DOID:4159;3.52e-11;2!DOID:0060122;3.52e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,5.16e-21,1;DOID:3451,3.35e-11,2;DOID:4159,3.35e-11,2;DOID:0060122,3.35e-11,2 | |||
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|short_description=p8@LPPR4 | |short_description=p8@LPPR4 | ||
}} | }} |
Latest revision as of 02:03, 20 September 2015
Short description: | p8@LPPR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LPPR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 246bp_to_BC041386_5end |
EntrezGene: | LPPR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 2.00e-12 | 6 |
central nervous system | 1.63e-11 | 81 |
middle temporal gyrus | 2.23e-11 | 2 |
amygdala | 2.47e-11 | 2 |
pineal body | 4.09e-11 | 2 |
regional part of epithalamus | 4.09e-11 | 2 |
secretory circumventricular organ | 4.09e-11 | 2 |
circumventricular organ | 4.09e-11 | 2 |
epithalamus | 4.09e-11 | 2 |
nervous system | 2.31e-10 | 89 |
neocortex | 3.75e-09 | 20 |
neural tube | 8.46e-09 | 56 |
neural rod | 8.46e-09 | 56 |
future spinal cord | 8.46e-09 | 56 |
neural keel | 8.46e-09 | 56 |
regional part of cerebral cortex | 2.08e-08 | 22 |
duodenum | 5.93e-08 | 2 |
spinal cord | 6.34e-08 | 3 |
dorsal region element | 6.34e-08 | 3 |
dorsum | 6.34e-08 | 3 |
regional part of forebrain | 6.84e-08 | 41 |
forebrain | 6.84e-08 | 41 |
anterior neural tube | 6.84e-08 | 41 |
future forebrain | 6.84e-08 | 41 |
cerebral cortex | 1.67e-07 | 25 |
pallium | 1.67e-07 | 25 |
brain | 3.37e-07 | 68 |
future brain | 3.37e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 5.16e-21 | 1 |
skin carcinoma | 3.35e-11 | 2 |
skin cancer | 3.35e-11 | 2 |
integumentary system cancer | 3.35e-11 | 2 |