FFCP PHASE1:Hg19::chr18:56296315..56296330,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=-126bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end | |association_with_transcript=-126bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end | ||
|cluster_id=chr18:56296315..56296330,- | |||
|coexpression_cluster_id=C1057 | |||
|description=CAGE_peak_12_at_ALPK2_5end | |description=CAGE_peak_12_at_ALPK2_5end | ||
|id=chr18:56296315..56296330,- | |id=chr18:56296315..56296330,- | ||
|ontology_enrichment_celltype=CL:0000791!5.68e-08!18;CL:0000789!5.68e-08!18;CL:0002420!5.68e-08!18;CL:0002419!5.68e-08!18;CL:0000790!5.68e-08!18 | |ontology_enrichment_celltype=CL:0000791!5.68e-08!18;CL:0000789!5.68e-08!18;CL:0002420!5.68e-08!18;CL:0002419!5.68e-08!18;CL:0000790!5.68e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000946;8.53e-08;1!CL:0000786;8.53e-08;1!CL:0002127;3.30e-07;1!CL:0000911;3.30e-07;1!CL:0000814;3.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,8.54e-08,1;CL:0000786,8.54e-08,1;CL:0000980,8.54e-08,1;CL:0002127,3.62e-07,1;CL:0000914,3.62e-07,1;CL:0000911,3.62e-07,1;CL:0000814,3.62e-07,1;CL:0002042,3.62e-07,1;CL:0002039,3.62e-07,1;CL:0002040,3.62e-07,1;CL:0002041,3.62e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.09e-14;4!UBERON:0007284;2.09e-14;4!UBERON:0004140;6.59e-08;1!UBERON:0010227;9.10e-08;1!UBERON:0010226;1.07e-07;1!UBERON:0000358;1.95e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1287;1.99e-14;4!DOID:114;1.46e-13;2!DOID:0050619;1.07e-07;1!DOID:1357;1.07e-07;1!DOID:178;1.66e-07;1!DOID:326;1.66e-07;1!DOID:3978;1.66e-07;1!DOID:3394;1.66e-07;1!DOID:5844;1.66e-07;1!DOID:2355;3.30e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1287,1.45e-14,4;DOID:114,1.42e-13,2;DOID:0050619,1.03e-07,1;DOID:1357,1.03e-07,1;DOID:178,1.61e-07,1;DOID:326,1.61e-07,1;DOID:3978,1.61e-07,1;DOID:3394,1.61e-07,1;DOID:5844,1.61e-07,1;DOID:2355,2.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002370!3.53e-09!4;UBERON:0005058!3.53e-09!4;UBERON:0009113!3.53e-09!4;UBERON:0003295!3.53e-09!4;UBERON:0005562!3.53e-09!4;UBERON:0004151!6.06e-08!3;UBERON:0004177!6.66e-08!7;UBERON:0003978!7.41e-08!3;UBERON:0009751!7.41e-08!3;UBERON:0000946!7.41e-08!3;UBERON:0002523!7.41e-08!3;UBERON:0005983!7.41e-08!3;UBERON:0002165!7.41e-08!3;UBERON:0002062!7.41e-08!3;UBERON:0007280!7.41e-08!3;UBERON:0001042!1.81e-07!10;UBERON:0009145!1.81e-07!10 | |ontology_enrichment_uberon=UBERON:0002370!3.53e-09!4;UBERON:0005058!3.53e-09!4;UBERON:0009113!3.53e-09!4;UBERON:0003295!3.53e-09!4;UBERON:0005562!3.53e-09!4;UBERON:0004151!6.06e-08!3;UBERON:0004177!6.66e-08!7;UBERON:0003978!7.41e-08!3;UBERON:0009751!7.41e-08!3;UBERON:0000946!7.41e-08!3;UBERON:0002523!7.41e-08!3;UBERON:0005983!7.41e-08!3;UBERON:0002165!7.41e-08!3;UBERON:0002062!7.41e-08!3;UBERON:0007280!7.41e-08!3;UBERON:0001042!1.81e-07!10;UBERON:0009145!1.81e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.93e-19;3!UBERON:0003978;5.10e-19;3!UBERON:0000946;5.10e-19;3!UBERON:0007100;9.15e-19;25!UBERON:0002081;2.72e-13;2!UBERON:0002133;4.19e-13;2!UBERON:0000948;9.46e-10;22!UBERON:0002079;9.10e-08;1!UBERON:0002084;1.07e-07;1!UBERON:0001764;1.07e-07;1!UBERON:0001825;1.07e-07;1!UBERON:0002082;1.07e-07;1!UBERON:0002146;1.21e-07;1!UBERON:0001389;1.21e-07;1!UBERON:0000026;1.21e-07;1!UBERON:0008784;1.21e-07;1!UBERON:0006058;1.21e-07;1!UBERON:0003663;1.21e-07;1!UBERON:0004256;1.21e-07;1!UBERON:0004708;1.21e-07;1!UBERON:0002101;1.21e-07;1!UBERON:0004709;1.21e-07;1!UBERON:0005623;1.21e-07;1!UBERON:0002529;1.21e-07;1!UBERON:0010538;1.21e-07;1!UBERON:0003661;1.21e-07;1!UBERON:0010890;1.21e-07;1!UBERON:0002471;1.21e-07;1!UBERON:0001383;1.21e-07;1!UBERON:0010758;1.21e-07;1!UBERON:0010707;1.21e-07;1!UBERON:0000978;1.21e-07;1!UBERON:0002103;1.21e-07;1!UBERON:0001665;1.21e-07;1!UBERON:0003823;1.21e-07;1!UBERON:0000154;1.21e-07;1!UBERON:0010709;1.21e-07;1!UBERON:0002135;1.42e-07;1!UBERON:0002134;3.30e-07;1!UBERON:0005208;3.30e-07;1!UBERON:0004145;3.30e-07;1!UBERON:0005946;3.30e-07;1!UBERON:0005965;3.30e-07;1!UBERON:0002078;3.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.75e-19,3;UBERON:0003978,4.80e-19,3;UBERON:0009751,4.80e-19,3;UBERON:0000946,4.80e-19,3;UBERON:0002523,4.80e-19,3;UBERON:0005983,4.80e-19,3;UBERON:0002165,4.80e-19,3;UBERON:0002062,4.80e-19,3;UBERON:0007280,4.80e-19,3;UBERON:0007100,2.84e-17,27;UBERON:0002081,2.49e-13,2;UBERON:0010227,2.49e-13,2;UBERON:0002133,3.83e-13,2;UBERON:0000948,6.83e-09,24;UBERON:0005498,6.83e-09,24;UBERON:0004140,6.83e-09,24;UBERON:0009881,6.83e-09,24;UBERON:0004141,6.83e-09,24;UBERON:0003084,6.83e-09,24;UBERON:0007005,6.83e-09,24;UBERON:0004139,6.83e-09,24;UBERON:0004291,6.83e-09,24;UBERON:0004797,1.88e-08,7;UBERON:0004177,2.68e-08,7;UBERON:0005057,2.68e-08,7;UBERON:0002079,9.10e-08,1;UBERON:0001764,1.03e-07,1;UBERON:0001825,1.03e-07,1;UBERON:0002084,1.10e-07,1;UBERON:0002082,1.10e-07,1;UBERON:0010226,1.10e-07,1;UBERON:0005418,1.18e-07,1;UBERON:0001389,1.18e-07,1;UBERON:0000026,1.18e-07,1;UBERON:0008784,1.18e-07,1;UBERON:0006058,1.18e-07,1;UBERON:0003663,1.18e-07,1;UBERON:0004256,1.18e-07,1;UBERON:0004708,1.18e-07,1;UBERON:0002101,1.18e-07,1;UBERON:0004709,1.18e-07,1;UBERON:0002529,1.18e-07,1;UBERON:0010538,1.18e-07,1;UBERON:0003661,1.18e-07,1;UBERON:0010890,1.18e-07,1;UBERON:0002471,1.18e-07,1;UBERON:0001383,1.18e-07,1;UBERON:0004357,1.18e-07,1;UBERON:0004347,1.18e-07,1;UBERON:0005420,1.18e-07,1;UBERON:0005732,1.18e-07,1;UBERON:0010758,1.18e-07,1;UBERON:0010707,1.18e-07,1;UBERON:0000978,1.18e-07,1;UBERON:0002103,1.18e-07,1;UBERON:0001665,1.18e-07,1;UBERON:0003823,1.18e-07,1;UBERON:0000154,1.18e-07,1;UBERON:0010709,1.18e-07,1;UBERON:0005733,1.18e-07,1;UBERON:0005730,1.18e-07,1;UBERON:0002146,1.25e-07,1;UBERON:0005623,1.25e-07,1;UBERON:0002135,1.42e-07,1;UBERON:0003103,2.25e-07,68;UBERON:0002134,3.01e-07,1;UBERON:0005208,3.01e-07,1;UBERON:0005946,3.01e-07,1;UBERON:0005965,3.01e-07,1;UBERON:0002078,3.01e-07,1;UBERON:0002370,7.95e-07,4;UBERON:0005058,7.95e-07,4;UBERON:0009113,7.95e-07,4;UBERON:0003295,7.95e-07,4;UBERON:0005562,7.95e-07,4 | |||
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| ||
|short_description=p12@ALPK2 | |short_description=p12@ALPK2 | ||
}} | }} |
Latest revision as of 00:19, 20 September 2015
Short description: | p12@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ALPK2_5end |
Coexpression cluster: | C1057_heart_teratocarcinoma_lymphangiectasia_plasma_adult_left_skeletal |
Association with transcript: | -126bp_to_ENST00000361673, NM_052947, uc002lhj.3_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 8.54e-08 | 1 |
plasma cell | 8.54e-08 | 1 |
plasmablast | 8.54e-08 | 1 |
innate effector T cell | 3.62e-07 | 1 |
immature NK T cell | 3.62e-07 | 1 |
effector T cell | 3.62e-07 | 1 |
mature NK T cell | 3.62e-07 | 1 |
immature NK T cell stage IV | 3.62e-07 | 1 |
immature NK T cell stage I | 3.62e-07 | 1 |
immature NK T cell stage II | 3.62e-07 | 1 |
immature NK T cell stage III | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system disease | 1.45e-14 | 4 |
heart disease | 1.42e-13 | 2 |
paranasal sinus cancer | 1.03e-07 | 1 |
maxillary sinus cancer | 1.03e-07 | 1 |
vascular disease | 1.61e-07 | 1 |
ischemia | 1.61e-07 | 1 |
extrinsic cardiomyopathy | 1.61e-07 | 1 |
myocardial ischemia | 1.61e-07 | 1 |
myocardial infarction | 1.61e-07 | 1 |
anemia | 2.21e-07 | 1 |