FFCP PHASE1:Hg19::chr2:21236386..21236401,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=2bp_to_M15421_5end | |association_with_transcript=2bp_to_M15421_5end | ||
|cluster_id=chr2:21236386..21236401,- | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_6_at_APOB_5end | |description=CAGE_peak_6_at_APOB_5end | ||
|id=chr2:21236386..21236401,- | |id=chr2:21236386..21236401,- | ||
|ontology_enrichment_celltype=CL:0000181!3.46e-37!12;CL:0000417!3.46e-37!12;CL:0000668!3.46e-37!12;CL:0000414!3.46e-37!12;CL:0000412!3.46e-37!12;CL:0000182!3.46e-37!12;CL:0000223!4.55e-14!59;CL:0002563!6.54e-10!4 | |ontology_enrichment_celltype=CL:0000181!3.46e-37!12;CL:0000417!3.46e-37!12;CL:0000668!3.46e-37!12;CL:0000414!3.46e-37!12;CL:0000412!3.46e-37!12;CL:0000182!3.46e-37!12;CL:0000223!4.55e-14!59;CL:0002563!6.54e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.62e-43;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.09e-43,12;CL:0000223,4.45e-15,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.33e-32;11!UBERON:0009497;1.30e-27;13!UBERON:0001041;5.33e-12;30!UBERON:0003104;1.35e-11;31!CL:0000223;1.38e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.95e-38!19;UBERON:0006925!2.95e-38!19;UBERON:0008836!2.95e-38!19;UBERON:0008835!6.97e-33!22;UBERON:0003894!6.97e-33!22;UBERON:0009854!2.11e-31!23;UBERON:0007499!8.50e-29!25;UBERON:0009497!8.50e-29!25;UBERON:0000015!8.50e-29!25;UBERON:0002423!8.50e-29!25;UBERON:0006235!8.50e-29!25;UBERON:0004161!8.50e-29!25;UBERON:0005057!1.21e-27!26;UBERON:0009856!1.21e-27!26;UBERON:0002365!5.42e-23!31;UBERON:0002330!5.42e-23!31;UBERON:0003929!1.45e-22!54;UBERON:0002368!3.17e-20!35;UBERON:0004921!1.39e-17!129;UBERON:0004185!1.39e-17!129;UBERON:0000949!1.87e-15!45;UBERON:0000160!4.62e-15!27;UBERON:0005911!3.35e-14!82;UBERON:0001007!3.45e-14!155;UBERON:0001555!3.45e-14!155;UBERON:0007026!3.45e-14!155;UBERON:0002530!3.54e-14!59;UBERON:0004119!8.69e-13!169;UBERON:0000925!8.69e-13!169;UBERON:0006595!8.69e-13!169;UBERON:0005172!2.05e-12!55;UBERON:0005173!2.05e-12!55;UBERON:0005409!1.47e-11!35;UBERON:0002417!4.56e-11!61;UBERON:0000916!4.56e-11!61;UBERON:0002079!2.50e-10!1;UBERON:0002022!4.75e-10!1;UBERON:0001242!6.54e-10!4;UBERON:0001262!6.54e-10!4;UBERON:0004786!6.54e-10!4;UBERON:0004808!6.54e-10!4;UBERON:0001277!6.54e-10!4;UBERON:0001155!1.89e-09!9;UBERON:0003350!4.22e-08!5;UBERON:0000059!8.02e-08!11;UBERON:0000490!1.22e-07!138;UBERON:0000077!7.87e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.68e-47;19!UBERON:0006925;1.68e-47;19!UBERON:0002423;5.47e-36;25!UBERON:0002365;8.06e-28;31!UBERON:0002330;8.06e-28;31!UBERON:0002108;6.59e-26;4!UBERON:0002368;1.48e-24;33!UBERON:0000949;5.71e-18;43!UBERON:0000160;8.92e-13;17!UBERON:0001007;1.07e-12;81!UBERON:0002530;3.94e-12;57!UBERON:0005172;9.34e-11;52!UBERON:0005173;9.34e-11;52!UBERON:0005409;4.63e-10;22!UBERON:0002417;1.79e-09;58!UBERON:0000916;1.79e-09;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.58e-47,19;UBERON:0006925,1.58e-47,19;UBERON:0008836,1.58e-47,19;UBERON:0008835,5.52e-41,22;UBERON:0003894,5.52e-41,22;UBERON:0009854,3.50e-39,23;UBERON:0007499,5.23e-36,25;UBERON:0009497,5.23e-36,25;UBERON:0000015,5.23e-36,25;UBERON:0002423,5.23e-36,25;UBERON:0006235,5.23e-36,25;UBERON:0004161,5.23e-36,25;UBERON:0009856,1.33e-34,26;UBERON:0002365,6.16e-29,31;UBERON:0002330,6.16e-29,31;UBERON:0002108,7.18e-26,4;UBERON:0002368,1.45e-25,35;UBERON:0003929,2.21e-25,54;UBERON:0000949,9.43e-20,45;UBERON:0004921,6.48e-19,118;UBERON:0002530,8.88e-19,59;UBERON:0005911,2.17e-16,82;UBERON:0005172,2.36e-16,54;UBERON:0005173,2.36e-16,54;UBERON:0001007,3.50e-15,145;UBERON:0001555,3.50e-15,145;UBERON:0007026,3.50e-15,145;UBERON:0002417,1.19e-14,60;UBERON:0000916,1.19e-14,60;UBERON:0004119,1.21e-13,160;UBERON:0000925,1.21e-13,160;UBERON:0006595,1.21e-13,160;UBERON:0000160,8.92e-13,17;UBERON:0001041,7.01e-10,87;UBERON:0011216,2.83e-09,223;UBERON:0005409,6.27e-09,25;UBERON:0005256,1.28e-08,122;UBERON:0000490,1.32e-08,148;UBERON:0005177,2.10e-08,101;UBERON:0009569,1.68e-07,112;UBERON:0003914,3.79e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,9.82827216677626,5.90789906681404,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5811277991619,15.823844809184,11.3237953675031,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,6.59485051551371,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16740453782901,5.02686989159102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7612415646386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,9.82827216677626,5.90789906681404,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5811277991619,15.823844809184,11.3237953675031,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,6.59485051551371,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16740453782901,5.02686989159102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7612415646386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@APOB | |short_description=p6@APOB | ||
}} | }} |
Latest revision as of 23:48, 19 September 2015
Short description: | p6@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_APOB_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | 2bp_to_M15421_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.09e-43 | 12 |
endodermal cell | 4.45e-15 | 58 |