FFCP PHASE1:Hg19::chr2:21234450..21234465,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |||
|TSSclassifier=strong | |||
|UniProt=P04114 | |||
|association_with_transcript=263bp_to_M17367_5end | |||
|cluster_id=chr2:21234450..21234465,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_18_at_APOB_5end | |||
|id=chr2:21234450..21234465,- | |||
|ontology_enrichment_celltype=CL:0000181!7.46e-48!12;CL:0000417!7.46e-48!12;CL:0000668!7.46e-48!12;CL:0000414!7.46e-48!12;CL:0000412!7.46e-48!12;CL:0000182!7.46e-48!12;CL:0000223!5.10e-12!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.01e-54;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.22e-54,12;CL:0000223,5.37e-14,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.79e-43;11!UBERON:0009497;2.06e-36;13!UBERON:0001041;1.12e-15;30!UBERON:0003104;3.24e-15;31!CL:0000223;9.76e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.27e-49!19;UBERON:0006925!2.27e-49!19;UBERON:0008836!2.27e-49!19;UBERON:0008835!1.60e-42!22;UBERON:0003894!1.60e-42!22;UBERON:0009854!1.23e-40!23;UBERON:0007499!2.58e-37!25;UBERON:0009497!2.58e-37!25;UBERON:0000015!2.58e-37!25;UBERON:0002423!2.58e-37!25;UBERON:0006235!2.58e-37!25;UBERON:0004161!2.58e-37!25;UBERON:0005057!7.61e-36!26;UBERON:0009856!7.61e-36!26;UBERON:0002365!6.47e-30!31;UBERON:0002330!6.47e-30!31;UBERON:0002368!2.18e-26!35;UBERON:0003929!1.21e-20!54;UBERON:0000949!2.63e-20!45;UBERON:0005172!1.99e-16!55;UBERON:0005173!1.99e-16!55;UBERON:0004921!6.34e-16!129;UBERON:0004185!6.34e-16!129;UBERON:0002530!3.04e-15!59;UBERON:0002417!1.04e-14!61;UBERON:0000916!1.04e-14!61;UBERON:0005911!3.58e-13!82;UBERON:0001007!5.83e-13!155;UBERON:0001555!5.83e-13!155;UBERON:0007026!5.83e-13!155;UBERON:0004119!9.75e-12!169;UBERON:0000925!9.75e-12!169;UBERON:0006595!9.75e-12!169;UBERON:0000160!2.64e-10!27;UBERON:0001041!9.62e-09!98;UBERON:0005409!5.40e-08!35;UBERON:0005177!6.51e-08!107;UBERON:0002108!1.47e-07!14;UBERON:0009569!1.97e-07!113;UBERON:0000490!2.71e-07!138;UBERON:0002405!3.28e-07!115;UBERON:0003914!4.54e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.86e-56;19!UBERON:0006925;7.86e-56;19!UBERON:0002423;2.90e-42;25!UBERON:0002365;6.59e-33;31!UBERON:0002330;6.59e-33;31!UBERON:0002368;7.60e-29;33!UBERON:0002108;3.39e-24;4!UBERON:0000949;1.12e-20;43!UBERON:0000160;3.69e-18;17!UBERON:0001007;1.57e-15;81!UBERON:0005409;3.20e-14;22!UBERON:0005172;1.27e-12;52!UBERON:0005173;1.27e-12;52!UBERON:0002417;1.04e-11;58!UBERON:0000916;1.04e-11;58!UBERON:0002530;2.52e-10;57!UBERON:0004921;1.96e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.87e-56,19;UBERON:0006925,7.87e-56,19;UBERON:0008836,7.87e-56,19;UBERON:0008835,4.00e-48,22;UBERON:0003894,4.00e-48,22;UBERON:0009854,5.31e-46,23;UBERON:0007499,2.90e-42,25;UBERON:0009497,2.90e-42,25;UBERON:0000015,2.90e-42,25;UBERON:0002423,2.90e-42,25;UBERON:0006235,2.90e-42,25;UBERON:0004161,2.90e-42,25;UBERON:0009856,1.31e-40,26;UBERON:0002365,6.14e-34,31;UBERON:0002330,6.14e-34,31;UBERON:0002368,5.70e-30,35;UBERON:0002108,3.68e-24,4;UBERON:0003929,1.45e-23,54;UBERON:0000949,3.97e-23,45;UBERON:0004921,2.44e-20,118;UBERON:0005172,3.97e-19,54;UBERON:0005173,3.97e-19,54;UBERON:0000160,4.11e-18,17;UBERON:0002530,1.97e-17,59;UBERON:0002417,3.99e-17,60;UBERON:0000916,3.99e-17,60;UBERON:0001007,2.65e-16,145;UBERON:0001555,2.65e-16,145;UBERON:0007026,2.65e-16,145;UBERON:0005911,3.72e-15,82;UBERON:0004119,1.21e-14,160;UBERON:0000925,1.21e-14,160;UBERON:0006595,1.21e-14,160;UBERON:0005409,1.50e-12,25;UBERON:0001041,1.62e-11,87;UBERON:0011216,6.39e-10,223;UBERON:0005177,8.76e-10,101;UBERON:0009569,1.01e-08,112;UBERON:0003914,2.63e-08,117;UBERON:0005256,6.35e-08,122;UBERON:0000490,7.09e-08,148 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.956309053676,12.7767538168091,5.31710916013264,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,5.75117230842733,4.94495150286999,5.19007287677224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27588041241097,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69783147837478,2.84127428655144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@APOB | |||
}} |
Latest revision as of 23:39, 19 September 2015
Short description: | p18@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 263bp_to_M17367_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.22e-54 | 12 |
endodermal cell | 5.37e-14 | 58 |