FFCP PHASE1:Hg19::chr2:21234450..21234465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=263bp_to_M17367_5end | |association_with_transcript=263bp_to_M17367_5end | ||
|cluster_id=chr2:21234450..21234465,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_18_at_APOB_5end | |description=CAGE_peak_18_at_APOB_5end | ||
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|ontology_enrichment_celltype=CL:0000181!7.46e-48!12;CL:0000417!7.46e-48!12;CL:0000668!7.46e-48!12;CL:0000414!7.46e-48!12;CL:0000412!7.46e-48!12;CL:0000182!7.46e-48!12;CL:0000223!5.10e-12!59 | |ontology_enrichment_celltype=CL:0000181!7.46e-48!12;CL:0000417!7.46e-48!12;CL:0000668!7.46e-48!12;CL:0000414!7.46e-48!12;CL:0000412!7.46e-48!12;CL:0000182!7.46e-48!12;CL:0000223!5.10e-12!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.01e-54;12 | |ontology_enrichment_celltype_v019=CL:0000182;5.01e-54;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.22e-54,12;CL:0000223,5.37e-14,58 | |||
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|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p18@APOB | |short_description=p18@APOB | ||
}} | }} |
Latest revision as of 23:39, 19 September 2015
Short description: | p18@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 263bp_to_M17367_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.22e-54 | 12 |
endodermal cell | 5.37e-14 | 58 |