FFCP PHASE1:Hg19::chr18:55888794..55888809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23327 | |EntrezGene=23327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7728 | |HGNC=7728 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_ENST00000431212,uc002lhg.2,uc010dpl.1_5end | |association_with_transcript=27bp_to_ENST00000431212,uc002lhg.2,uc010dpl.1_5end | ||
|cluster_id=chr18:55888794..55888809,+ | |||
|description=CAGE_peak_1_at_NEDD4L_5end | |description=CAGE_peak_1_at_NEDD4L_5end | ||
|id=chr18:55888794..55888809,+ | |id=chr18:55888794..55888809,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.65e-43!254;CL:0000223!1.44e-10!59;CL:0002076!5.72e-10!43;CL:0000220!7.54e-09!246;CL:0002321!1.21e-08!248;CL:0002077!5.12e-08!33;CL:0000076!1.42e-07!62;CL:1000497!1.90e-07!18;CL:0002518!1.90e-07!18;CL:0000075!2.10e-07!27 | |ontology_enrichment_celltype=CL:0000066!7.65e-43!254;CL:0000223!1.44e-10!59;CL:0002076!5.72e-10!43;CL:0000220!7.54e-09!246;CL:0002321!1.21e-08!248;CL:0002077!5.12e-08!33;CL:0000076!1.42e-07!62;CL:1000497!1.90e-07!18;CL:0002518!1.90e-07!18;CL:0000075!2.10e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.07e-08;42!CL:1000497;7.86e-08;17!CL:0002518;7.86e-08;17!CL:0002077;2.08e-07;34!CL:0000075;5.23e-07;27!CL:1000449;8.35e-07;15 | |ontology_enrichment_celltype_v019=CL:0002076;1.07e-08;42!CL:1000497;7.86e-08;17!CL:0002518;7.86e-08;17!CL:0002077;2.08e-07;34!CL:0000075;5.23e-07;27!CL:1000449;8.35e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.74e-46,253;CL:0000223,9.91e-12,58;CL:0002076,8.60e-11,42;CL:0002321,2.15e-09,250;CL:0000076,1.23e-08,63;CL:0002077,4.42e-08,34;CL:1000497,7.38e-08,17;CL:0002518,7.38e-08,17;CL:0000075,5.17e-07,27;CL:1000449,7.88e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;9.77e-07;58 | |ontology_enrichment_development_v019=CL:0000223;9.77e-07;58 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,6.46e-15,106;DOID:0050687,2.48e-12,143;DOID:14566,3.01e-08,239;DOID:162,2.00e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.85e-20!169;UBERON:0000925!8.85e-20!169;UBERON:0006595!8.85e-20!169;UBERON:0000062!2.54e-15!511;UBERON:0001007!1.02e-14!155;UBERON:0001555!1.02e-14!155;UBERON:0007026!1.02e-14!155;UBERON:0004921!3.97e-13!129;UBERON:0004185!3.97e-13!129;UBERON:0000077!1.65e-12!130;UBERON:0000466!7.21e-11!126;UBERON:0005177!8.84e-11!107;UBERON:0000464!1.65e-10!104;UBERON:0000467!1.97e-10!625;UBERON:0000481!2.45e-10!347;UBERON:0000480!3.27e-10!626;UBERON:0000468!1.84e-09!659;UBERON:0001041!2.12e-09!98;UBERON:0003104!2.64e-09!238;UBERON:0009142!2.64e-09!238;UBERON:0001008!4.92e-09!45;UBERON:0000064!7.74e-09!219;UBERON:0006554!1.03e-08!44;UBERON:0000923!1.97e-08!604;UBERON:0005291!1.97e-08!604;UBERON:0006598!1.97e-08!604;UBERON:0002532!1.97e-08!604;UBERON:0005631!2.21e-08!14;UBERON:0000158!2.21e-08!14;UBERON:0000922!2.99e-08!612;UBERON:0001004!3.02e-08!72;UBERON:0002050!3.08e-08!605;UBERON:0005423!3.08e-08!605;UBERON:0001048!1.16e-07!168;UBERON:0000065!1.77e-07!53;UBERON:0005911!2.49e-07!82;UBERON:0003064!2.91e-07!37;UBERON:0002553!9.54e-07!70 | |ontology_enrichment_uberon=UBERON:0004119!8.85e-20!169;UBERON:0000925!8.85e-20!169;UBERON:0006595!8.85e-20!169;UBERON:0000062!2.54e-15!511;UBERON:0001007!1.02e-14!155;UBERON:0001555!1.02e-14!155;UBERON:0007026!1.02e-14!155;UBERON:0004921!3.97e-13!129;UBERON:0004185!3.97e-13!129;UBERON:0000077!1.65e-12!130;UBERON:0000466!7.21e-11!126;UBERON:0005177!8.84e-11!107;UBERON:0000464!1.65e-10!104;UBERON:0000467!1.97e-10!625;UBERON:0000481!2.45e-10!347;UBERON:0000480!3.27e-10!626;UBERON:0000468!1.84e-09!659;UBERON:0001041!2.12e-09!98;UBERON:0003104!2.64e-09!238;UBERON:0009142!2.64e-09!238;UBERON:0001008!4.92e-09!45;UBERON:0000064!7.74e-09!219;UBERON:0006554!1.03e-08!44;UBERON:0000923!1.97e-08!604;UBERON:0005291!1.97e-08!604;UBERON:0006598!1.97e-08!604;UBERON:0002532!1.97e-08!604;UBERON:0005631!2.21e-08!14;UBERON:0000158!2.21e-08!14;UBERON:0000922!2.99e-08!612;UBERON:0001004!3.02e-08!72;UBERON:0002050!3.08e-08!605;UBERON:0005423!3.08e-08!605;UBERON:0001048!1.16e-07!168;UBERON:0000065!1.77e-07!53;UBERON:0005911!2.49e-07!82;UBERON:0003064!2.91e-07!37;UBERON:0002553!9.54e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.68e-09;30!UBERON:0001008;2.68e-09;30!UBERON:0010371;2.94e-07;31!UBERON:0006555;8.35e-07;15!UBERON:0004819;8.35e-07;15!UBERON:0001285;8.35e-07;15!UBERON:0007684;8.35e-07;15!UBERON:0002113;9.58e-07;24!UBERON:0011143;9.58e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0006554;2.68e-09;30!UBERON:0001008;2.68e-09;30!UBERON:0010371;2.94e-07;31!UBERON:0006555;8.35e-07;15!UBERON:0004819;8.35e-07;15!UBERON:0001285;8.35e-07;15!UBERON:0007684;8.35e-07;15!UBERON:0002113;9.58e-07;24!UBERON:0011143;9.58e-07;24 | ||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,36.1228886657218,15.3516256953934,117.084575461772,74.3822878604239,9.53000917792359,2.65117900582333,4.70627602516243,5.42425075221579,5.11217063271161,3.41552959153355,2.09305798730539,8.56802903225863,0.626909442956176,0.572471974262113,0.410623275218653,1.12988375635323,0.152826811495903,0,0,0,0.767658796194425,1.23852898652861,6.43594857135249,18.072355126695,8.13458822366933,0,0,0,1.10799081706375,0.601633342410425,0,0,0,0,0.145398238779565,2.64513160582167,1.4555043671269,3.25400651667958,6.16751832032739,12.078548464909,0.28769239232215,1.2808035326455,2.36482229888585,4.82643953031266,21.3009945582663,13.5426486594342,0.376484679085209,2.72906150057846,5.39336362668203,3.97909060082173,18.6138835704134,8.95071976118658,0,0.997318288108159,0,6.09439401120026,20.425868088881,18.6846674698673,2.00998932205395,1.5644487552606,3.47502151528187,6.05399502633369,23.9380463391917,17.0889689218078,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,1.17447437874188,1.91136614062614,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0.664601683750863,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0.50133791063589,1.15877215168659,0,0,14.4638270261024,18.4035399893928,16.6886092816939,11.7881167947941,12.0217445136539,11.1235332835329,0.649094787309367,0,0.26591592103773,0,0,0,0,0,2.42998351125316,0,0.419499436209906,0,0.835979866147242,32.0436781369968,33.4420286925508,29.7901345360556,10.876391561947,3.04108842287405,15.864033740631,3.67663080345869,0,17.0562481022592,9.43023365029913,11.4863710092989,0,0,0,0,0,10.9023513035634,0,0.12663051166458,4.50191214764944,0,0.709336764396714,3.36406560085384,3.20246987189115,6.41335625884616,0.311211035399766,0.404132016209064,0,1.96764655938411,1.15235184896,11.7160715916898,1.5608003841516,1.1409436430889,0,1.76151747965647,0.485618833104395,0.280901613404497,1.42907919878425,6.1417158655884,0,0,0,0.910161361938026,2.15585442544872,0.673344455816265,0.625592599359821,10.2513722729148,0.438977620880838,0.919463387397059,0,1.02088964844019,5.202299434977,0.640672166455702,0,0.300091096084402,0.515262646192195,2.83404594050192,0.744467425326359,1.18143432568886,0.0974370051611986,1.00973509697646,0.552299391853796,0,0.710019185033229,0,5.25637836162512,67.6412986071539,90.8244581567479,157.168918273174,0.121973706129595,0.397589304964456,0.69716365721711,2.17688215532278,0.504641701751257,0,14.0804579096834,1.28648187638577,9.66944449467364,5.10804720835177,2.16563844500876,11.1208392037453,10.4522507848423,10.8454963447567,11.9117490550985,10.6760927605279,12.1008015746659,11.0561672691335,11.5770664423954,11.5424147083917,0,4.20725321410337,5.7620361586396,0,0,0,1.77236972004421,0,33.0838899680975,25.9067393550774,59.8139055477009,43.8366837704716,19.3015627030331,35.3687860505583,2.93227474779292,1.03993478527958,40.4127757670765,0.34779121492523,28.4129040050688,27.5739915223651,27.7791307545966,18.6449069189906,2.37061319387782,2.57545848628462,0,1.40402559083543,0,65.6136837907439,90.878331355583,89.0347610682187,44.9583783968298,22.960081142603,51.3732790081383,0,0,1.24396869324463,0.432359860250884,1.8936365013957,16.2554609387953,49.2765068970178,3.51652341630141,5.13217338068116,12.0308166462889,38.1435683461775,9.43227227680908,1.68196626518041,0,1.24675085895615,2.58543431515556,0,0,14.360658295583,13.5209667984776,3.34369586540785,1.41849132023278,4.52917704327369,0.428933980974443,2.17048642156577,1.64648067356154,0.325736184293735,1.06617584622764,0,25.0194682959456,58.3927417262197,32.7911411077147,0,0,0,9.34536936417172,0,0,0.144781306667579,0,0.179060963239896,16.0281755910744,0,0,0,0,0,0,0.167516265334349,0,0,0,0,4.17151071845076,3.00102312635806,4.88277042659524,10.814484799602,19.9840467452821,9.77754973210395,16.3997980989798,5.71797589482666,9.09630016223939,3.10419213877515,13.9487375692442,11.0621501125022,3.82287903659565,0.783204629850962,0,0,0,0,58.5036212891281,46.6019230629392,38.4035672528694,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,19.0957930354763,52.1316822788541,9.39226087146143,2.52591785962135,1.27463817604702,0.393373244878272,46.022360516556,64.0767604708731,21.9617935369519,26.3050604375869,50.6647818685803,3.4120015221269,6.46356080050759,22.6711711907246,1.54227252690289,13.8182683147365,16.5557625372102,63.4641919882145,43.2159524642937,55.297064416378,1.09629938322967,1.0457418040996,16.4128080074489,11.8085272451894,12.0390006025792,31.1183855176121,0.183138929636687,0,64.8920057935675,42.9039762384104,0,2.61010939388729,1.54048617114644,1.84204409671355,4.27293374702045,1.82614416276065,2.17525040871343,5.28405089979826,0.801288320820636,22.644033404454,34.0176419236238,155.304671105909,9.30651583871059,0,0,0,0,1.06461206063404,0,0.37064843820784,0.715624433709956,3.72158369359667,19.615524332561,9.15024930834359,12.0271961916327,7.27496279657665,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| ||
|short_description=p1@NEDD4L | |short_description=p1@NEDD4L | ||
}} | }} |
Latest revision as of 23:29, 19 September 2015
Short description: | p1@NEDD4L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEDD4L_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000431212, uc002lhg.2, uc010dpl.1_5end |
EntrezGene: | NEDD4L |
HGNC: | 7728 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.74e-46 | 253 |
endodermal cell | 9.91e-12 | 58 |
endo-epithelial cell | 8.60e-11 | 42 |
embryonic cell | 2.15e-09 | 250 |
squamous epithelial cell | 1.23e-08 | 63 |
ecto-epithelial cell | 4.42e-08 | 34 |
kidney cell | 7.38e-08 | 17 |
kidney epithelial cell | 7.38e-08 | 17 |
columnar/cuboidal epithelial cell | 5.17e-07 | 27 |
epithelial cell of nephron | 7.88e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.69e-18 | 160 |
endoderm | 2.69e-18 | 160 |
presumptive endoderm | 2.69e-18 | 160 |
digestive system | 5.57e-13 | 145 |
digestive tract | 5.57e-13 | 145 |
primitive gut | 5.57e-13 | 145 |
trunk region element | 5.71e-13 | 101 |
renal system | 8.09e-12 | 48 |
subdivision of digestive tract | 8.53e-12 | 118 |
urinary system structure | 1.86e-11 | 47 |
respiratory system | 1.30e-09 | 74 |
extraembryonic membrane | 5.95e-09 | 14 |
membranous layer | 5.95e-09 | 14 |
respiratory tract | 2.39e-08 | 54 |
foregut | 6.17e-08 | 87 |
endo-epithelium | 7.29e-08 | 82 |
respiratory primordium | 5.41e-07 | 38 |
endoderm of foregut | 5.41e-07 | 38 |
nephron epithelium | 7.88e-07 | 15 |
renal tubule | 7.88e-07 | 15 |
nephron tubule | 7.88e-07 | 15 |
nephron | 7.88e-07 | 15 |
uriniferous tubule | 7.88e-07 | 15 |
nephrogenic mesenchyme | 7.88e-07 | 15 |
kidney | 9.28e-07 | 26 |
kidney mesenchyme | 9.28e-07 | 26 |
upper urinary tract | 9.28e-07 | 26 |
kidney rudiment | 9.28e-07 | 26 |
kidney field | 9.28e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.46e-15 | 106 |
cell type cancer | 2.48e-12 | 143 |
disease of cellular proliferation | 3.01e-08 | 239 |
cancer | 2.00e-07 | 235 |