FFCP PHASE1:Hg19::chr2:21231944..21231959,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=Q13789 | |UniProt=Q13789 | ||
|association_with_transcript=-428bp_to_X03324_5end | |association_with_transcript=-428bp_to_X03324_5end | ||
|cluster_id=chr2:21231944..21231959,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_APOB_5end | |description=CAGE_peak_5_at_APOB_5end | ||
|id=chr2:21231944..21231959,- | |id=chr2:21231944..21231959,- | ||
|ontology_enrichment_celltype=CL:0000181!6.54e-26!12;CL:0000417!6.54e-26!12;CL:0000668!6.54e-26!12;CL:0000414!6.54e-26!12;CL:0000412!6.54e-26!12;CL:0000182!6.54e-26!12;CL:0000223!3.40e-09!59;CL:0002563!3.08e-07!4 | |ontology_enrichment_celltype=CL:0000181!6.54e-26!12;CL:0000417!6.54e-26!12;CL:0000668!6.54e-26!12;CL:0000414!6.54e-26!12;CL:0000412!6.54e-26!12;CL:0000182!6.54e-26!12;CL:0000223!3.40e-09!59;CL:0002563!3.08e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.29e-40;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.14e-40,12;CL:0000223,8.20e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.58e-30;11!UBERON:0009497;1.13e-25;13!UBERON:0001041;3.87e-11;30!UBERON:0003104;9.15e-11;31!CL:0000223;3.03e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.02e-26!19;UBERON:0006925!2.02e-26!19;UBERON:0008836!2.02e-26!19;UBERON:0008835!1.28e-22!22;UBERON:0003894!1.28e-22!22;UBERON:0009854!1.43e-21!23;UBERON:0007499!1.00e-19!25;UBERON:0009497!1.00e-19!25;UBERON:0000015!1.00e-19!25;UBERON:0002423!1.00e-19!25;UBERON:0006235!1.00e-19!25;UBERON:0004161!1.00e-19!25;UBERON:0005057!6.56e-19!26;UBERON:0009856!6.56e-19!26;UBERON:0002365!1.28e-15!31;UBERON:0002330!1.28e-15!31;UBERON:0003929!6.17e-15!54;UBERON:0002368!1.16e-13!35;UBERON:0004921!8.30e-11!129;UBERON:0004185!8.30e-11!129;UBERON:0005911!1.01e-10!82;UBERON:0000949!2.71e-10!45;UBERON:0002530!2.86e-09!59;UBERON:0001007!1.97e-08!155;UBERON:0001555!1.97e-08!155;UBERON:0007026!1.97e-08!155;UBERON:0005172!3.75e-08!55;UBERON:0005173!3.75e-08!55;UBERON:0000160!1.04e-07!27;UBERON:0002171!1.30e-07!1;UBERON:0006518!1.30e-07!1;UBERON:0008949!1.30e-07!1;UBERON:0000101!1.30e-07!1;UBERON:0002167!1.30e-07!1;UBERON:0002135!1.48e-07!1;UBERON:0004119!1.86e-07!169;UBERON:0000925!1.86e-07!169;UBERON:0006595!1.86e-07!169;UBERON:0001242!3.08e-07!4;UBERON:0001262!3.08e-07!4;UBERON:0004786!3.08e-07!4;UBERON:0004808!3.08e-07!4;UBERON:0001277!3.08e-07!4;UBERON:0002417!3.31e-07!61;UBERON:0000916!3.31e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.13e-44;19!UBERON:0006925;2.13e-44;19!UBERON:0002423;1.31e-33;25!UBERON:0002365;5.71e-26;31!UBERON:0002330;5.71e-26;31!UBERON:0002108;2.89e-24;4!UBERON:0002368;6.37e-23;33!UBERON:0000160;4.11e-18;17!UBERON:0000949;8.75e-17;43!UBERON:0005409;3.48e-14;22!UBERON:0001007;4.48e-14;81!UBERON:0005172;4.58e-10;52!UBERON:0005173;4.58e-10;52!UBERON:0002417;7.20e-09;58!UBERON:0000916;7.20e-09;58!UBERON:0002530;9.15e-09;57!UBERON:0004921;2.07e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.19e-44,19;UBERON:0006925,2.19e-44,19;UBERON:0008836,2.19e-44,19;UBERON:0008835,2.93e-38,22;UBERON:0003894,2.93e-38,22;UBERON:0009854,1.43e-36,23;UBERON:0007499,1.34e-33,25;UBERON:0009497,1.34e-33,25;UBERON:0000015,1.34e-33,25;UBERON:0002423,1.34e-33,25;UBERON:0006235,1.34e-33,25;UBERON:0004161,1.34e-33,25;UBERON:0009856,2.76e-32,26;UBERON:0002365,5.58e-27,31;UBERON:0002330,5.58e-27,31;UBERON:0002108,2.67e-24,4;UBERON:0002368,8.00e-24,35;UBERON:0003929,3.88e-19,54;UBERON:0000949,2.23e-18,45;UBERON:0000160,3.96e-18,17;UBERON:0004921,1.95e-17,118;UBERON:0005172,3.39e-15,54;UBERON:0005173,3.39e-15,54;UBERON:0001007,6.09e-14,145;UBERON:0001555,6.09e-14,145;UBERON:0007026,6.09e-14,145;UBERON:0002530,7.60e-14,59;UBERON:0002417,1.33e-13,60;UBERON:0000916,1.33e-13,60;UBERON:0005409,1.47e-12,25;UBERON:0004119,1.67e-12,160;UBERON:0000925,1.67e-12,160;UBERON:0006595,1.67e-12,160;UBERON:0005911,2.76e-12,82;UBERON:0001041,3.88e-09,87;UBERON:0011216,2.08e-08,223;UBERON:0005177,9.34e-08,101;UBERON:0009569,6.53e-07,112 | |||
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|short_description=p5@APOB | |short_description=p5@APOB | ||
}} | }} |
Latest revision as of 23:20, 19 September 2015
Short description: | p5@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -428bp_to_X03324_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q13789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.14e-40 | 12 |
endodermal cell | 8.20e-11 | 58 |