FFCP PHASE1:Hg19::chrX:152224777..152224805,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29944 | |EntrezGene=29944 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18742 | |HGNC=18742 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL41 | |UniProt=Q9UL41 | ||
|association_with_transcript=11bp_to_ENST00000370265,ENST00000447306,NM_013364,uc004fhc.2_5end | |association_with_transcript=11bp_to_ENST00000370265,ENST00000447306,NM_013364,uc004fhc.2_5end | ||
|cluster_id=chrX:152224777..152224805,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_PNMA3_5end | |description=CAGE_peak_3_at_PNMA3_5end | ||
|id=chrX:152224777..152224805,+ | |id=chrX:152224777..152224805,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.42e-07!6;CL:0000031!2.42e-07!6;CL:0000404!2.42e-07!6;CL:0000147!6.94e-07!14;CL:0000047!7.74e-07!8;CL:0002322!8.30e-07!5 | |ontology_enrichment_celltype=CL:0000540!2.42e-07!6;CL:0000031!2.42e-07!6;CL:0000404!2.42e-07!6;CL:0000147!6.94e-07!14;CL:0000047!7.74e-07!8;CL:0002322!8.30e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.88e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.18e-16;82 | |||
|ontology_enrichment_disease=DOID:171!6.59e-07!10 | |ontology_enrichment_disease=DOID:171!6.59e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.36e-48!94;UBERON:0001016!1.36e-48!94;UBERON:0005743!4.78e-47!86;UBERON:0001017!4.25e-43!82;UBERON:0001049!2.58e-41!57;UBERON:0005068!2.58e-41!57;UBERON:0006241!2.58e-41!57;UBERON:0007135!2.58e-41!57;UBERON:0002346!1.07e-36!90;UBERON:0003075!1.63e-34!86;UBERON:0007284!1.63e-34!86;UBERON:0002780!3.99e-34!41;UBERON:0001890!3.99e-34!41;UBERON:0006240!3.99e-34!41;UBERON:0002020!5.26e-34!34;UBERON:0003528!5.26e-34!34;UBERON:0001893!1.07e-33!34;UBERON:0002616!1.69e-33!59;UBERON:0003080!5.24e-33!42;UBERON:0000955!1.30e-32!69;UBERON:0006238!1.30e-32!69;UBERON:0002791!2.06e-32!33;UBERON:0001869!3.87e-32!32;UBERON:0007023!1.74e-29!115;UBERON:0003056!2.09e-28!61;UBERON:0002619!2.59e-26!22;UBERON:0000924!9.16e-25!173;UBERON:0006601!9.16e-25!173;UBERON:0001950!2.49e-24!20;UBERON:0000956!2.97e-24!25;UBERON:0000203!2.97e-24!25;UBERON:0004121!5.48e-23!169;UBERON:0000033!2.26e-19!123;UBERON:0000153!2.48e-18!129;UBERON:0007811!2.48e-18!129;UBERON:0002308!3.57e-11!9;UBERON:0000125!3.57e-11!9;UBERON:0002420!7.46e-11!9;UBERON:0007245!7.46e-11!9;UBERON:0010009!7.46e-11!9;UBERON:0010011!7.46e-11!9;UBERON:0000454!7.46e-11!9;UBERON:0003076!2.11e-09!15;UBERON:0003057!2.11e-09!15;UBERON:0000200!2.22e-09!6;UBERON:0000064!1.19e-08!219;UBERON:0009663!1.22e-08!7;UBERON:0000025!1.27e-08!194;UBERON:0001871!2.56e-08!7;UBERON:0002298!4.83e-08!8;UBERON:0002021!8.88e-08!5;UBERON:0001872!1.07e-07!5;UBERON:0000349!5.63e-07!5 | |ontology_enrichment_uberon=UBERON:0000073!1.36e-48!94;UBERON:0001016!1.36e-48!94;UBERON:0005743!4.78e-47!86;UBERON:0001017!4.25e-43!82;UBERON:0001049!2.58e-41!57;UBERON:0005068!2.58e-41!57;UBERON:0006241!2.58e-41!57;UBERON:0007135!2.58e-41!57;UBERON:0002346!1.07e-36!90;UBERON:0003075!1.63e-34!86;UBERON:0007284!1.63e-34!86;UBERON:0002780!3.99e-34!41;UBERON:0001890!3.99e-34!41;UBERON:0006240!3.99e-34!41;UBERON:0002020!5.26e-34!34;UBERON:0003528!5.26e-34!34;UBERON:0001893!1.07e-33!34;UBERON:0002616!1.69e-33!59;UBERON:0003080!5.24e-33!42;UBERON:0000955!1.30e-32!69;UBERON:0006238!1.30e-32!69;UBERON:0002791!2.06e-32!33;UBERON:0001869!3.87e-32!32;UBERON:0007023!1.74e-29!115;UBERON:0003056!2.09e-28!61;UBERON:0002619!2.59e-26!22;UBERON:0000924!9.16e-25!173;UBERON:0006601!9.16e-25!173;UBERON:0001950!2.49e-24!20;UBERON:0000956!2.97e-24!25;UBERON:0000203!2.97e-24!25;UBERON:0004121!5.48e-23!169;UBERON:0000033!2.26e-19!123;UBERON:0000153!2.48e-18!129;UBERON:0007811!2.48e-18!129;UBERON:0002308!3.57e-11!9;UBERON:0000125!3.57e-11!9;UBERON:0002420!7.46e-11!9;UBERON:0007245!7.46e-11!9;UBERON:0010009!7.46e-11!9;UBERON:0010011!7.46e-11!9;UBERON:0000454!7.46e-11!9;UBERON:0003076!2.11e-09!15;UBERON:0003057!2.11e-09!15;UBERON:0000200!2.22e-09!6;UBERON:0000064!1.19e-08!219;UBERON:0009663!1.22e-08!7;UBERON:0000025!1.27e-08!194;UBERON:0001871!2.56e-08!7;UBERON:0002298!4.83e-08!8;UBERON:0002021!8.88e-08!5;UBERON:0001872!1.07e-07!5;UBERON:0000349!5.63e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.17e-44;34!UBERON:0002020;3.17e-44;34!UBERON:0001869;3.23e-44;32!UBERON:0001950;8.67e-44;20!UBERON:0002619;1.29e-43;22!UBERON:0001893;2.56e-43;34!UBERON:0002791;6.26e-41;32!UBERON:0000956;6.65e-38;25!UBERON:0000203;6.65e-38;25!UBERON:0002780;1.82e-35;41!UBERON:0001890;1.82e-35;41!UBERON:0000073;4.56e-34;53!UBERON:0002616;4.56e-34;53!UBERON:0000955;2.83e-26;68!UBERON:0001017;2.77e-25;75!UBERON:0001016;1.64e-19;83!UBERON:0000200;2.44e-17;6!UBERON:0002298;2.60e-16;6!UBERON:0002021;3.61e-14;5!UBERON:0000125;4.41e-14;9!UBERON:0002308;4.41e-14;9!UBERON:0001872;8.88e-14;5!UBERON:0002420;1.83e-13;9!UBERON:0007245;1.83e-13;9!UBERON:0010009;1.83e-13;9!UBERON:0010011;1.83e-13;9!UBERON:0000454;1.83e-13;9!UBERON:0007023;2.85e-12;114!UBERON:0000369;2.57e-11;4!UBERON:0002435;2.57e-11;4!UBERON:0000204;2.57e-11;4!UBERON:0004733;1.96e-10;12!UBERON:0002028;1.96e-10;12!UBERON:0001871;1.06e-09;6!UBERON:0001870;1.28e-09;3!UBERON:0004732;1.53e-09;13!UBERON:0000988;1.58e-09;3!UBERON:0009663;2.05e-09;7!UBERON:0005383;6.82e-09;3!UBERON:0005382;6.82e-09;3!UBERON:0001896;1.70e-08;3!UBERON:0005290;1.70e-08;3!UBERON:0000349;2.35e-08;5!UBERON:0002050;4.67e-08;5!UBERON:0005423;4.67e-08;5!UBERON:0011216;2.26e-07;132!UBERON:0000922;5.29e-07;49!UBERON:0002702;5.95e-07;2!UBERON:0002148;8.58e-07;2!UBERON:0006331;8.58e-07;2!UBERON:0009662;8.58e-07;2!UBERON:0002771;9.73e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.68e-63,56;UBERON:0005068,4.68e-63,56;UBERON:0006241,4.68e-63,56;UBERON:0007135,4.68e-63,56;UBERON:0001017,7.34e-61,81;UBERON:0000073,6.93e-60,53;UBERON:0002616,6.93e-60,53;UBERON:0001016,3.67e-56,89;UBERON:0000955,1.92e-55,68;UBERON:0006238,1.92e-55,68;UBERON:0003528,4.79e-51,34;UBERON:0002020,4.79e-51,34;UBERON:0002780,1.61e-50,41;UBERON:0001890,1.61e-50,41;UBERON:0003080,1.61e-50,41;UBERON:0006240,1.61e-50,41;UBERON:0001893,1.68e-50,34;UBERON:0001869,2.88e-50,32;UBERON:0002346,1.10e-48,86;UBERON:0002791,4.26e-46,32;UBERON:0003075,2.35e-44,82;UBERON:0007284,2.35e-44,82;UBERON:0001950,4.72e-44,20;UBERON:0002619,5.65e-44,22;UBERON:0000956,3.22e-38,25;UBERON:0000203,3.22e-38,25;UBERON:0003056,4.93e-36,61;UBERON:0007023,1.98e-33,114;UBERON:0010371,1.18e-32,104;UBERON:0004121,3.67e-30,171;UBERON:0000924,3.67e-30,171;UBERON:0006601,3.67e-30,171;UBERON:0010314,5.91e-25,132;UBERON:0011216,2.51e-19,223;UBERON:0000200,2.38e-17,6;UBERON:0002298,1.70e-16,6;UBERON:0000025,8.61e-15,192;UBERON:0002021,4.04e-14,5;UBERON:0000125,5.10e-14,9;UBERON:0002308,5.10e-14,9;UBERON:0001872,5.89e-14,5;UBERON:0002420,1.68e-13,9;UBERON:0007245,1.68e-13,9;UBERON:0010009,1.68e-13,9;UBERON:0010011,1.68e-13,9;UBERON:0000454,1.68e-13,9;UBERON:0003076,2.04e-13,15;UBERON:0003057,2.04e-13,15;UBERON:0000369,2.91e-11,4;UBERON:0002435,2.91e-11,4;UBERON:0000204,2.91e-11,4;UBERON:0010082,2.91e-11,4;UBERON:0004733,1.51e-10,12;UBERON:0002028,1.51e-10,12;UBERON:0007277,1.51e-10,12;UBERON:0001871,8.32e-10,6;UBERON:0004111,1.03e-09,240;UBERON:0001870,1.16e-09,3;UBERON:0004732,1.20e-09,13;UBERON:0000988,1.37e-09,3;UBERON:0009663,2.55e-09,7;UBERON:0005383,7.31e-09,3;UBERON:0005382,7.31e-09,3;UBERON:0001896,1.28e-08,3;UBERON:0005290,1.28e-08,3;UBERON:0010096,1.28e-08,3;UBERON:0000349,1.42e-08,5;UBERON:0000922,3.00e-07,592;UBERON:0002702,5.32e-07,2;UBERON:0002148,7.47e-07,2;UBERON:0006331,7.47e-07,2;UBERON:0009662,7.47e-07,2 | |||
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|short_description=p3@PNMA3 | |short_description=p3@PNMA3 | ||
}} | }} |
Latest revision as of 23:19, 19 September 2015
Short description: | p3@PNMA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PNMA3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 11bp_to_ENST00000370265, ENST00000447306, NM_013364, uc004fhc.2_5end |
EntrezGene: | PNMA3 |
HGNC: | 18742 |
UniProt: | Q9UL41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.88e-08 | 5 |