FFCP PHASE1:Hg19::chr3:121613362..121613373,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6565 | |EntrezGene=6565 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10921 | |HGNC=10921 | ||
|TSSclassifier=strong | |||
|UniProt=Q16348 | |UniProt=Q16348 | ||
|association_with_transcript=67bp_to_S78203_5end | |association_with_transcript=67bp_to_S78203_5end | ||
|cluster_id=chr3:121613362..121613373,+ | |||
|coexpression_cluster_id=C2284 | |||
|description=CAGE_peak_4_at_SLC15A2_5end | |description=CAGE_peak_4_at_SLC15A2_5end | ||
|id=chr3:121613362..121613373,+ | |id=chr3:121613362..121613373,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.16e-19;2!UBERON:0006241;5.80e-13;3!UBERON:0003057;5.80e-13;3!UBERON:0005754;8.52e-11;1!UBERON:0006601;3.49e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.79e-79!57;UBERON:0005068!4.79e-79!57;UBERON:0006241!4.79e-79!57;UBERON:0007135!4.79e-79!57;UBERON:0007023!9.87e-68!115;UBERON:0002616!1.99e-64!59;UBERON:0001017!6.32e-63!82;UBERON:0005743!1.70e-62!86;UBERON:0003075!6.43e-60!86;UBERON:0007284!6.43e-60!86;UBERON:0000955!2.50e-59!69;UBERON:0006238!2.50e-59!69;UBERON:0002780!3.74e-59!41;UBERON:0001890!3.74e-59!41;UBERON:0006240!3.74e-59!41;UBERON:0002020!1.62e-58!34;UBERON:0003528!1.62e-58!34;UBERON:0001893!2.40e-58!34;UBERON:0003080!1.42e-57!42;UBERON:0002346!9.42e-57!90;UBERON:0002791!7.00e-56!33;UBERON:0000073!1.48e-55!94;UBERON:0001016!1.48e-55!94;UBERON:0001869!1.48e-53!32;UBERON:0002619!2.98e-41!22;UBERON:0001950!1.14e-40!20;UBERON:0003056!5.20e-40!61;UBERON:0000153!6.51e-40!129;UBERON:0007811!6.51e-40!129;UBERON:0000033!2.59e-38!123;UBERON:0000956!6.95e-36!25;UBERON:0000203!6.95e-36!25;UBERON:0004121!5.51e-32!169;UBERON:0000924!5.74e-31!173;UBERON:0006601!5.74e-31!173;UBERON:0002420!8.32e-26!9;UBERON:0007245!8.32e-26!9;UBERON:0010009!8.32e-26!9;UBERON:0010011!8.32e-26!9;UBERON:0000454!8.32e-26!9;UBERON:0002308!3.88e-25!9;UBERON:0000125!3.88e-25!9;UBERON:0003076!1.65e-21!15;UBERON:0003057!1.65e-21!15;UBERON:0009663!5.24e-20!7;UBERON:0004111!3.75e-18!241;UBERON:0000025!6.19e-18!194;UBERON:0000200!3.71e-17!6;UBERON:0002298!1.29e-16!8;UBERON:0000477!3.50e-15!286;UBERON:0002021!1.32e-14!5;UBERON:0004733!2.57e-14!12;UBERON:0002028!2.57e-14!12;UBERON:0007277!2.57e-14!12;UBERON:0000475!2.67e-14!365;UBERON:0001871!4.11e-13!7;UBERON:0004732!4.19e-13!13;UBERON:0000369!9.66e-13!4;UBERON:0002435!9.66e-13!4;UBERON:0000204!9.66e-13!4;UBERON:0010082!9.66e-13!4;UBERON:0000483!3.70e-12!309;UBERON:0000119!6.32e-12!312;UBERON:0000064!1.17e-11!219;UBERON:0005383!2.54e-10!3;UBERON:0005382!2.54e-10!3;UBERON:0000349!3.89e-10!5;UBERON:0002240!9.24e-10!3;UBERON:0001896!1.71e-09!3;UBERON:0005290!1.71e-09!3;UBERON:0010096!1.71e-09!3;UBERON:0002771!1.87e-09!3;UBERON:0001872!2.48e-09!5;UBERON:0006331!3.72e-09!3;UBERON:0000988!4.94e-09!3;UBERON:0000062!6.76e-08!511;UBERON:0002680!7.48e-08!9;UBERON:0001895!7.48e-08!9;UBERON:0010092!7.48e-08!9;UBERON:0000481!1.27e-07!347;UBERON:0001876!1.65e-07!2;UBERON:0001873!2.05e-07!2;UBERON:0010122!2.05e-07!2;UBERON:0001897!5.40e-07!2;UBERON:0001829!6.84e-07!2;UBERON:0000341!8.16e-07!2;UBERON:0002148!8.16e-07!2;UBERON:0009662!8.16e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;1.08e-35;9!UBERON:0007245;1.08e-35;9!UBERON:0010009;1.08e-35;9!UBERON:0010011;1.08e-35;9!UBERON:0000454;1.08e-35;9!UBERON:0005383;5.93e-28;3!UBERON:0005382;5.93e-28;3!UBERON:0000125;4.60e-25;9!UBERON:0002308;4.60e-25;9!UBERON:0002791;1.93e-21;32!UBERON:0000369;3.88e-21;4!UBERON:0002435;3.88e-21;4!UBERON:0000204;3.88e-21;4!UBERON:0009663;5.14e-21;7!UBERON:0001869;1.56e-20;32!UBERON:0003528;2.50e-20;34!UBERON:0002020;2.50e-20;34!UBERON:0001017;5.53e-20;75!UBERON:0001873;2.16e-19;2!UBERON:0001876;5.94e-19;2!UBERON:0001893;1.00e-18;34!UBERON:0002780;1.10e-14;41!UBERON:0001890;1.10e-14;41!UBERON:0000955;1.84e-14;68!UBERON:0006947;2.96e-13;3!UBERON:0004054;2.96e-13;3!UBERON:0002240;5.80e-13;3!UBERON:0005174;5.80e-13;3!UBERON:0001137;5.80e-13;3!UBERON:0000073;1.11e-12;53!UBERON:0002616;1.11e-12;53!UBERON:0001871;2.45e-12;6!UBERON:0000998;8.52e-11;1!UBERON:0006868;8.52e-11;1!UBERON:0001950;8.53e-11;20!UBERON:0001016;1.59e-10;83!UBERON:0005795;2.38e-10;1!UBERON:0001874;2.38e-10;1!UBERON:0003112;2.38e-10;1!UBERON:0001000;2.38e-10;1!UBERON:0011158;2.38e-10;1!UBERON:0005352;2.38e-10;1!UBERON:0003128;2.38e-10;1!UBERON:0001703;2.38e-10;1!UBERON:0002241;2.38e-10;1!UBERON:0005904;3.61e-10;4!UBERON:0002619;7.63e-10;22!UBERON:0007023;1.15e-09;114!UBERON:0000956;1.09e-08;25!UBERON:0000203;1.09e-08;25!UBERON:0002021;2.63e-08;5!UBERON:0000349;3.92e-08;5!UBERON:0004733;2.09e-07;12!UBERON:0002028;2.09e-07;12!UBERON:0002298;4.65e-07;6!UBERON:0004732;7.18e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.09e-35,9;UBERON:0007245,1.09e-35,9;UBERON:0010009,1.09e-35,9;UBERON:0010011,1.09e-35,9;UBERON:0000454,1.09e-35,9;UBERON:0001049,2.53e-33,56;UBERON:0005068,2.53e-33,56;UBERON:0006241,2.53e-33,56;UBERON:0007135,2.53e-33,56;UBERON:0001017,6.41e-29,81;UBERON:0005383,9.01e-28,3;UBERON:0005382,9.01e-28,3;UBERON:0000073,2.79e-26,53;UBERON:0002616,2.79e-26,53;UBERON:0007023,5.83e-26,114;UBERON:0001016,7.90e-26,89;UBERON:0000125,7.82e-25,9;UBERON:0002308,7.82e-25,9;UBERON:0003528,2.16e-24,34;UBERON:0002020,2.16e-24,34;UBERON:0000955,3.45e-23,68;UBERON:0006238,3.45e-23,68;UBERON:0003075,3.93e-22,82;UBERON:0007284,3.93e-22,82;UBERON:0002791,4.88e-21,32;UBERON:0001869,4.88e-21,32;UBERON:0000369,5.30e-21,4;UBERON:0002435,5.30e-21,4;UBERON:0000204,5.30e-21,4;UBERON:0010082,5.30e-21,4;UBERON:0002346,5.30e-21,86;UBERON:0009663,8.65e-21,7;UBERON:0002780,3.84e-20,41;UBERON:0001890,3.84e-20,41;UBERON:0003080,3.84e-20,41;UBERON:0006240,3.84e-20,41;UBERON:0001893,9.11e-20,34;UBERON:0001876,2.38e-19,2;UBERON:0001873,4.53e-19,2;UBERON:0010122,4.53e-19,2;UBERON:0010371,5.58e-17,104;UBERON:0003076,4.74e-15,15;UBERON:0003057,4.74e-15,15;UBERON:0010314,7.82e-15,132;UBERON:0006947,1.93e-13,3;UBERON:0004054,1.93e-13,3;UBERON:0003056,3.61e-13,61;UBERON:0002240,4.56e-13,3;UBERON:0005174,4.56e-13,3;UBERON:0001137,4.56e-13,3;UBERON:0001871,1.83e-12,6;UBERON:0004121,2.36e-12,171;UBERON:0000924,2.36e-12,171;UBERON:0006601,2.36e-12,171;UBERON:0000998,6.73e-11,1;UBERON:0006868,6.73e-11,1;UBERON:0001950,7.77e-11,20;UBERON:0001000,1.57e-10,1;UBERON:0005352,1.57e-10,1;UBERON:0001874,1.73e-10,1;UBERON:0005904,2.62e-10,4;UBERON:0003112,2.74e-10,1;UBERON:0011158,2.74e-10,1;UBERON:0003128,2.74e-10,1;UBERON:0001703,2.74e-10,1;UBERON:0002241,2.74e-10,1;UBERON:0004761,2.74e-10,1;UBERON:0009617,2.74e-10,1;UBERON:0011216,4.35e-10,223;UBERON:0002619,7.02e-10,22;UBERON:0000956,1.01e-08,25;UBERON:0000203,1.01e-08,25;UBERON:0000349,2.73e-08,5;UBERON:0002021,2.94e-08,5;UBERON:0004111,3.93e-08,240;UBERON:0000025,4.36e-08,192;UBERON:0004733,2.17e-07,12;UBERON:0002028,2.17e-07,12;UBERON:0007277,2.17e-07,12;UBERON:0002298,4.95e-07,6;UBERON:0004732,7.41e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.54736358051564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.834912883456661,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.08536794762867,1.52581736317083,0,0.591095237907095,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.937057782901357,0,0,0,1.57833761139756,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.26446520348538,0,0,0.640724475406168,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,2.07444650333337,0.250381861413,2.29363678276028,0.665574309221114,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,2.8339315265117,0.638535436228605,1.23069818544453,0.252071696221718,0.207471757392654,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0.413373593002368,0.317079050969534,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.591954962065642,0,0,0.706437835654626,1.57115589916002,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,1.76677620403451,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0.917458566809082,0.286679166302903,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,0.413731983447581,0.426467963801962,0.952257725854961,0,0,0,0,0.606351566874658,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.54736358051564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.834912883456661,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.08536794762867,1.52581736317083,0,0.591095237907095,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.937057782901357,0,0,0,1.57833761139756,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.26446520348538,0,0,0.640724475406168,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,2.07444650333337,0.250381861413,2.29363678276028,0.665574309221114,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,2.8339315265117,0.638535436228605,1.23069818544453,0.252071696221718,0.207471757392654,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0.413373593002368,0.317079050969534,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.591954962065642,0,0,0.706437835654626,1.57115589916002,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,1.76677620403451,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0.917458566809082,0.286679166302903,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,0.413731983447581,0.426467963801962,0.952257725854961,0,0,0,0,0.606351566874658,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,0,0 | ||
|short_description=p4@SLC15A2 | |short_description=p4@SLC15A2 | ||
}} | }} |
Latest revision as of 23:04, 19 September 2015
Short description: | p4@SLC15A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC15A2_5end |
Coexpression cluster: | C2284_occipital_brain_hippocampus_medial_medulla_amygdala_cerebellum |
Association with transcript: | 67bp_to_S78203_5end |
EntrezGene: | SLC15A2 |
HGNC: | 10921 |
UniProt: | Q16348 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data