FFCP PHASE1:Hg19::chr2:21228790..21228817,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:21228790..21228817,-
|short_description=p4@APOB
|description=CAGE_peak_4_at_APOB_5end
|association_with_transcript=-233bp_to_M12413_5end
|EntrezGene=338
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=-233bp_to_M12413_5end | |||
|cluster_id=chr2:21228790..21228817,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_APOB_5end | |||
|id=chr2:21228790..21228817,- | |||
|ontology_enrichment_celltype=CL:0000181!1.49e-39!12;CL:0000417!1.49e-39!12;CL:0000668!1.49e-39!12;CL:0000414!1.49e-39!12;CL:0000412!1.49e-39!12;CL:0000182!1.49e-39!12;CL:0000223!3.51e-16!59;CL:0002563!2.78e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.09e-47;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-47,12;CL:0000223,2.27e-15,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.74e-38;11!UBERON:0009497;3.58e-32;13!UBERON:0001041;8.55e-14;30!UBERON:0003104;2.17e-13;31!CL:0000223;4.05e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.86e-38!19;UBERON:0006925!1.86e-38!19;UBERON:0008836!1.86e-38!19;UBERON:0008835!5.37e-33!22;UBERON:0003894!5.37e-33!22;UBERON:0009854!1.71e-31!23;UBERON:0007499!7.62e-29!25;UBERON:0009497!7.62e-29!25;UBERON:0000015!7.62e-29!25;UBERON:0002423!7.62e-29!25;UBERON:0006235!7.62e-29!25;UBERON:0004161!7.62e-29!25;UBERON:0002365!1.02e-27!31;UBERON:0002330!1.02e-27!31;UBERON:0005057!1.13e-27!26;UBERON:0009856!1.13e-27!26;UBERON:0003929!3.15e-21!54;UBERON:0002368!3.89e-20!35;UBERON:0004921!2.44e-17!129;UBERON:0004185!2.44e-17!129;UBERON:0002530!2.59e-16!59;UBERON:0000949!2.71e-15!45;UBERON:0001007!7.45e-14!155;UBERON:0001555!7.45e-14!155;UBERON:0007026!7.45e-14!155;UBERON:0005911!3.67e-13!82;UBERON:0004119!2.04e-12!169;UBERON:0000925!2.04e-12!169;UBERON:0006595!2.04e-12!169;UBERON:0000160!3.04e-12!27;UBERON:0005172!3.29e-12!55;UBERON:0005173!3.29e-12!55;UBERON:0002417!7.63e-11!61;UBERON:0000916!7.63e-11!61;UBERON:0005409!2.41e-09!35;UBERON:0002084!1.22e-08!1;UBERON:0002082!1.22e-08!1;UBERON:0004706!1.22e-08!1;UBERON:0001242!2.78e-08!4;UBERON:0001262!2.78e-08!4;UBERON:0004786!2.78e-08!4;UBERON:0004808!2.78e-08!4;UBERON:0001277!2.78e-08!4;UBERON:0001155!7.37e-08!9;UBERON:0001041!1.83e-07!98;UBERON:0000077!2.06e-07!130;UBERON:0000490!7.38e-07!138;UBERON:0003350!8.66e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.92e-49;19!UBERON:0006925;2.92e-49;19!UBERON:0002423;3.13e-37;25!UBERON:0002365;6.13e-29;31!UBERON:0002330;6.13e-29;31!UBERON:0002368;2.24e-25;33!UBERON:0002108;1.04e-21;4!UBERON:0000949;3.38e-18;43!UBERON:0000160;4.31e-16;17!UBERON:0001007;1.07e-13;81!UBERON:0005409;1.37e-12;22!UBERON:0002530;1.71e-11;57!UBERON:0005172;4.01e-11;52!UBERON:0005173;4.01e-11;52!UBERON:0002417;2.54e-10;58!UBERON:0000916;2.54e-10;58!UBERON:0004921;1.81e-07;33 | |||
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|short_description=p4@APOB | |||
}} | }} |
Latest revision as of 22:58, 19 September 2015
Short description: | p4@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -233bp_to_M12413_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-47 | 12 |
endodermal cell | 2.27e-15 | 58 |