FFCP PHASE1:Hg19::chr22:33257853..33257865,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=273bp_to_AF035289_5end | |||
|cluster_id=chr22:33257853..33257865,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_26_at_TIMP3_5end | |||
|id=chr22:33257853..33257865,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.48e-27;3!CL:0000349;1.43e-11;19!CL:0002581;6.05e-10;1!CL:0002591;6.05e-10;1!CL:0002379;6.05e-10;1!CL:0002537;5.21e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.91e-27,3;CL:0000349,1.13e-11,19;CL:0002379,3.71e-10,1;CL:0002581,4.06e-10,1;CL:0002591,9.82e-10,1;CL:0002537,4.01e-08,5;CL:0000192,9.91e-07,43;CL:0000514,9.91e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;2.47e-10;1!DOID:3620;6.05e-10;1!DOID:3565;6.05e-10;1!DOID:2513;6.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,2.37e-10,1;DOID:3620,3.71e-10,1;DOID:3565,3.71e-10,1;DOID:2513,8.24e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.48e-27;3!UBERON:0000920;2.48e-27;3!UBERON:0005631;4.36e-22;10!UBERON:0000158;4.36e-22;10!UBERON:0002135;2.47e-10;1!UBERON:0001389;6.05e-10;1!UBERON:0000026;6.05e-10;1!UBERON:0008784;6.05e-10;1!UBERON:0006058;6.05e-10;1!UBERON:0003663;6.05e-10;1!UBERON:0004256;6.05e-10;1!UBERON:0004708;6.05e-10;1!UBERON:0002101;6.05e-10;1!UBERON:0004709;6.05e-10;1!UBERON:0002529;6.05e-10;1!UBERON:0010538;6.05e-10;1!UBERON:0003661;6.05e-10;1!UBERON:0010890;6.05e-10;1!UBERON:0002471;6.05e-10;1!UBERON:0001383;6.05e-10;1!UBERON:0010758;6.05e-10;1!UBERON:0010707;6.05e-10;1!UBERON:0000978;6.05e-10;1!UBERON:0002103;6.05e-10;1!UBERON:0001665;6.05e-10;1!UBERON:0003823;6.05e-10;1!UBERON:0000154;6.05e-10;1!UBERON:0010709;6.05e-10;1!UBERON:0000478;3.99e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.91e-27,3;UBERON:0005631,6.82e-16,14;UBERON:0000158,6.82e-16,14;UBERON:0003124,4.16e-12,7;UBERON:0002135,2.59e-10,1;UBERON:0005418,5.79e-10,1;UBERON:0001389,5.79e-10,1;UBERON:0000026,5.79e-10,1;UBERON:0008784,5.79e-10,1;UBERON:0006058,5.79e-10,1;UBERON:0003663,5.79e-10,1;UBERON:0004256,5.79e-10,1;UBERON:0004708,5.79e-10,1;UBERON:0002101,5.79e-10,1;UBERON:0004709,5.79e-10,1;UBERON:0002529,5.79e-10,1;UBERON:0010538,5.79e-10,1;UBERON:0003661,5.79e-10,1;UBERON:0010890,5.79e-10,1;UBERON:0002471,5.79e-10,1;UBERON:0001383,5.79e-10,1;UBERON:0004357,5.79e-10,1;UBERON:0004347,5.79e-10,1;UBERON:0005420,5.79e-10,1;UBERON:0005732,5.79e-10,1;UBERON:0010758,5.79e-10,1;UBERON:0010707,5.79e-10,1;UBERON:0000978,5.79e-10,1;UBERON:0002103,5.79e-10,1;UBERON:0001665,5.79e-10,1;UBERON:0003823,5.79e-10,1;UBERON:0000154,5.79e-10,1;UBERON:0010709,5.79e-10,1;UBERON:0005733,5.79e-10,1;UBERON:0005730,5.79e-10,1;UBERON:0000478,3.32e-09,24;UBERON:0003498,6.77e-08,5;UBERON:0005985,6.77e-08,5 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0,0,0.37223371266318,0.506328996723799,0.194874010322397,0.504867548488229,0.184099797284599,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,1.47495334833363,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.384417447767103,0.511707249066704,0,1.48418066444991,0.308419387605311,0,0.164254312027618,0,0.232420756919918,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,1.25924938732256,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0.255897791311334,1.28381696410176,0,0,0,0,0,0.202182481573316,4.75530963519025,0,0,0.243713489631284,1.05650146756755,0,0,1.13008116620243,0.551365343546124,0,0.438450885253763,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,1.90995587790152,0.296964680832639,5.83605333988541,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0.102268682502155,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,4.78501739597879,1.37396390102793,11.72676507241,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0.19871461170299,0,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,3.6306712165393,0.687481272035051,0.717873024576814,0.199679000498991,1.28767814440971,0.446342914883745,0.268733889946905,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.339936274560377,0.146552233678082,0,0.387848869084652,0.13223260174269,0,0,0.427149650270779,0,0.828478110694391,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,1.72022758707021,0,0,0,0,0,0.285465333544967,1.6468607378872,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0.829412415681711,0.53168342911599,1.04349012362347,0.150257608997218,0.761610424337591,0.813741466409323,0,0,0,1.19428766609585,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.709618961301111,0,0,0.0679697329768317,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0.414432328326074,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,1.29485767437579,0.307988420568741,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0,0,3.90832363781979,0.187967835959707,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0.606351566874658,0.217716747896961,0.342233301085281,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p26@TIMP3 | |||
}} |
Latest revision as of 22:58, 19 September 2015
Short description: | p26@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 273bp_to_AF035289_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.91e-27 | 3 |
extraembryonic cell | 1.13e-11 | 19 |
meningothelial cell | 3.71e-10 | 1 |
perirenal preadipocyte | 4.06e-10 | 1 |
smooth muscle cell of the pulmonary artery | 9.82e-10 | 1 |
amnion mesenchymal stem cell | 4.01e-08 | 5 |
smooth muscle cell | 9.91e-07 | 43 |
smooth muscle myoblast | 9.91e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.91e-27 | 3 |
extraembryonic membrane | 6.82e-16 | 14 |
membranous layer | 6.82e-16 | 14 |
chorion | 4.16e-12 | 7 |
mitral valve | 2.59e-10 | 1 |
hindlimb bud | 5.79e-10 | 1 |
soleus muscle | 5.79e-10 | 1 |
appendage | 5.79e-10 | 1 |
lower limb segment | 5.79e-10 | 1 |
multi-limb segment region | 5.79e-10 | 1 |
hindlimb muscle | 5.79e-10 | 1 |
hindlimb zeugopod muscle | 5.79e-10 | 1 |
paired limb/fin | 5.79e-10 | 1 |
limb | 5.79e-10 | 1 |
pelvic appendage | 5.79e-10 | 1 |
limb segment | 5.79e-10 | 1 |
paired limb/fin segment | 5.79e-10 | 1 |
limb muscle | 5.79e-10 | 1 |
pelvic complex muscle | 5.79e-10 | 1 |
zeugopod | 5.79e-10 | 1 |
muscle of leg | 5.79e-10 | 1 |
paired limb/fin bud | 5.79e-10 | 1 |
limb bud | 5.79e-10 | 1 |
pelvic appendage bud | 5.79e-10 | 1 |
limb/fin field | 5.79e-10 | 1 |
subdivision of organism along appendicular axis | 5.79e-10 | 1 |
appendage girdle complex | 5.79e-10 | 1 |
leg | 5.79e-10 | 1 |
hindlimb | 5.79e-10 | 1 |
triceps surae | 5.79e-10 | 1 |
hindlimb zeugopod | 5.79e-10 | 1 |
posterior region of body | 5.79e-10 | 1 |
pelvic complex | 5.79e-10 | 1 |
limb field | 5.79e-10 | 1 |
hindlimb/pelvic fin field | 5.79e-10 | 1 |
extraembryonic structure | 3.32e-09 | 24 |
heart blood vessel | 6.77e-08 | 5 |
coronary vessel | 6.77e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 2.37e-10 | 1 |
central nervous system cancer | 3.71e-10 | 1 |
meningioma | 3.71e-10 | 1 |
basal cell carcinoma | 8.24e-10 | 1 |