FFCP PHASE1:Hg19::chr2:21228233..21228242,-: Difference between revisions
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|id=chr2:21228233..21228242,-
|short_description=p56@APOB
|description=CAGE_peak_56_at_APOB_5end
|association_with_transcript=66bp_to_X03325_5end
|EntrezGene=338
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=66bp_to_X03325_5end | |||
|cluster_id=chr2:21228233..21228242,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_56_at_APOB_5end | |||
|id=chr2:21228233..21228242,- | |||
|ontology_enrichment_celltype=CL:0000181!1.42e-35!12;CL:0000417!1.42e-35!12;CL:0000668!1.42e-35!12;CL:0000414!1.42e-35!12;CL:0000412!1.42e-35!12;CL:0000182!1.42e-35!12;CL:0002127!1.09e-12!1;CL:0000914!1.09e-12!1;CL:0000911!1.09e-12!1;CL:0000814!1.09e-12!1;CL:0002042!1.09e-12!1;CL:0002039!1.09e-12!1;CL:0002040!1.09e-12!1;CL:0002041!1.09e-12!1;CL:0000223!5.26e-12!59;CL:0000893!5.60e-07!2;CL:0002489!5.60e-07!2;CL:0000809!5.60e-07!2;CL:0000808!5.60e-07!2;CL:0000894!5.60e-07!2;CL:0000806!5.60e-07!2;CL:0000807!5.60e-07!2;CL:0000805!5.60e-07!2;CL:0002425!5.60e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.30e-66;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.94e-66,12;CL:0000223,8.85e-14,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.33e-49;11!UBERON:0009497;4.79e-42;13!UBERON:0001041;1.99e-18;30!UBERON:0003104;8.63e-18;31!CL:0000223;3.27e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p56@APOB | |||
}} | }} |
Latest revision as of 22:57, 19 September 2015
Short description: | p56@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_56_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 66bp_to_X03325_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.94e-66 | 12 |
endodermal cell | 8.85e-14 | 58 |