FFCP PHASE1:Hg19::chr19:54984354..54984463,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:54984354..54984463,- to FFCP PHASE1:Hg19::chr19:54984354..54984463,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148170 | |EntrezGene=148170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17408 | |HGNC=17408 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NZY7 | |UniProt=Q6NZY7 | ||
|association_with_transcript=0bp_to_ENST00000301200,NM_145057,uc002qfz.1_5end | |||
|cluster_id=chr19:54984354..54984463,- | |||
|coexpression_cluster_id=C3282 | |||
|description=CAGE_peak_1_at_CDC42EP5_5end | |||
|id=chr19:54984354..54984463,- | |||
|ontology_enrichment_celltype=CL:0000055!7.12e-23!180;CL:0000222!3.62e-22!119;CL:0000220!5.99e-19!246;CL:0002321!7.79e-19!248;CL:0000115!3.53e-14!35;CL:0000183!4.12e-14!59;CL:0000057!1.93e-13!75;CL:0002139!4.47e-13!24;CL:0002078!4.66e-13!44;CL:0000187!9.50e-13!54;CL:0000680!1.26e-12!57;CL:0000056!1.26e-12!57;CL:0000355!1.26e-12!57;CL:0000213!4.74e-11!57;CL:0000215!4.74e-11!57;CL:0000192!7.14e-11!42;CL:0000514!7.14e-11!42;CL:0000393!5.51e-10!60;CL:0000211!5.51e-10!60;CL:0000071!1.82e-09!18;CL:0002546!1.82e-09!18;CL:0000359!2.32e-09!32;CL:0002371!3.19e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.13e-13;24!CL:0000115;2.98e-12;36!CL:0000071;1.11e-09;18!CL:0002078;2.21e-09;45!CL:0000359;3.70e-09;32!CL:0000192;1.54e-08;43!CL:0000187;1.62e-07;55!CL:0000213;3.07e-07;58!CL:0000215;3.07e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.47e-22,121;CL:0002321,9.79e-19,250;CL:0000115,1.26e-14,36;CL:0000057,5.38e-14,76;CL:0002139,2.07e-13,24;CL:0002078,2.66e-13,45;CL:0000187,2.82e-13,55;CL:0000680,3.75e-13,58;CL:0000056,3.75e-13,58;CL:0000355,3.75e-13,58;CL:0000192,2.43e-11,43;CL:0000514,2.43e-11,43;CL:0000213,4.59e-11,58;CL:0000215,4.59e-11,58;CL:0000393,1.21e-10,61;CL:0000211,1.21e-10,61;CL:0000071,1.07e-09,18;CL:0002546,1.07e-09,18;CL:0000359,1.38e-09,32 | |||
|ontology_enrichment_development_v019=CL:0002546;1.11e-09;18!CL:0000514;1.54e-08;43!CL:0000355;1.97e-07;58!CL:0000222;5.75e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.76e-25!79;UBERON:0007798!1.76e-25!79;UBERON:0004872!2.88e-24!84;UBERON:0000055!1.08e-22!69;UBERON:0004535!1.98e-19!110;UBERON:0001009!2.03e-19!113;UBERON:0001981!2.20e-19!60;UBERON:0007500!2.20e-19!60;UBERON:0004537!2.20e-19!60;UBERON:0006965!2.20e-19!60;UBERON:0003914!1.24e-18!118;UBERON:0000468!2.53e-18!659;UBERON:0005256!6.89e-18!143;UBERON:0000486!1.62e-17!82;UBERON:0000914!3.20e-17!83;UBERON:0002329!3.20e-17!83;UBERON:0003077!3.20e-17!83;UBERON:0003059!3.20e-17!83;UBERON:0007282!3.20e-17!83;UBERON:0009618!3.20e-17!83;UBERON:0007285!3.20e-17!83;UBERON:0000119!5.89e-17!312;UBERON:0002100!2.10e-16!216;UBERON:0000483!2.37e-16!309;UBERON:0000490!2.87e-16!138;UBERON:0000475!3.09e-15!365;UBERON:0004290!6.48e-15!70;UBERON:0001637!6.61e-14!42;UBERON:0003509!6.61e-14!42;UBERON:0004572!6.61e-14!42;UBERON:0000467!1.05e-13!625;UBERON:0000481!1.85e-13!347;UBERON:0000480!2.04e-13!626;UBERON:0002385!2.64e-13!63;UBERON:0001015!2.64e-13!63;UBERON:0000383!2.64e-13!63;UBERON:0001134!7.52e-13!61;UBERON:0002036!7.52e-13!61;UBERON:0003082!7.52e-13!61;UBERON:0003104!1.35e-12!238;UBERON:0009142!1.35e-12!238;UBERON:0004573!4.77e-12!33;UBERON:0004571!4.77e-12!33;UBERON:0000477!5.35e-12!286;UBERON:0004111!2.11e-11!241;UBERON:0003102!3.37e-11!95;UBERON:0000922!1.71e-09!612;UBERON:0001986!1.82e-09!18;UBERON:0004638!1.82e-09!18;UBERON:0004852!1.82e-09!18;UBERON:0002050!5.13e-09!605;UBERON:0005423!5.13e-09!605;UBERON:0000923!8.34e-09!604;UBERON:0005291!8.34e-09!604;UBERON:0006598!8.34e-09!604;UBERON:0002532!8.34e-09!604;UBERON:0006914!1.21e-08!25;UBERON:0003103!7.65e-08!69;UBERON:0000487!1.15e-07!22;UBERON:0000025!1.97e-07!194;UBERON:0000947!1.98e-07!21;UBERON:0010191!1.98e-07!21;UBERON:0000926!3.24e-07!448;UBERON:0004120!3.24e-07!448;UBERON:0006603!3.24e-07!448;UBERON:0002199!6.45e-07!45;UBERON:0002416!6.45e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;1.96e-11;65!UBERON:0007500;2.28e-11;56!UBERON:0001981;2.28e-11;56!UBERON:0004537;2.28e-11;56!UBERON:0004573;2.81e-11;33!UBERON:0004571;2.81e-11;33!UBERON:0001637;8.05e-11;42!UBERON:0003509;8.05e-11;42!UBERON:0004572;8.05e-11;42!UBERON:0002049;2.17e-10;75!UBERON:0007798;2.17e-10;75!UBERON:0004638;1.11e-09;18!UBERON:0001986;1.11e-09;18!UBERON:0004852;1.11e-09;18!UBERON:0006914;9.30e-09;25!UBERON:0003914;5.89e-08;74!UBERON:0000487;9.34e-08;22!UBERON:0000947;1.39e-07;21!UBERON:0010191;1.39e-07;21 | |||
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| ||
|short_description=p1@CDC42EP5 | |||
}} | }} |
Latest revision as of 22:49, 19 September 2015
Short description: | p1@CDC42EP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC42EP5_5end |
Coexpression cluster: | C3282_Mesenchymal_Renal_Endothelial_Hepatic_Fibroblast_Pericytes_Trabecular |
Association with transcript: | 0bp_to_ENST00000301200, NM_145057, uc002qfz.1_5end |
EntrezGene: | CDC42EP5 |
HGNC: | 17408 |
UniProt: | Q6NZY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.47e-22 | 121 |
embryonic cell | 9.79e-19 | 250 |
endothelial cell | 1.26e-14 | 36 |
fibroblast | 5.38e-14 | 76 |
endothelial cell of vascular tree | 2.07e-13 | 24 |
meso-epithelial cell | 2.66e-13 | 45 |
muscle cell | 2.82e-13 | 55 |
muscle precursor cell | 3.75e-13 | 58 |
myoblast | 3.75e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.75e-13 | 58 |
smooth muscle cell | 2.43e-11 | 43 |
smooth muscle myoblast | 2.43e-11 | 43 |
lining cell | 4.59e-11 | 58 |
barrier cell | 4.59e-11 | 58 |
electrically responsive cell | 1.21e-10 | 61 |
electrically active cell | 1.21e-10 | 61 |
blood vessel endothelial cell | 1.07e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.07e-09 | 18 |
vascular associated smooth muscle cell | 1.38e-09 | 32 |