FFCP PHASE1:Hg19::chr14:37051798..37051831,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:37051798..37051831,- to FFCP PHASE1:Hg19::chr14:37051798..37051831,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26257 | |EntrezGene=26257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16364 | |HGNC=16364 | ||
|TSSclassifier=strong | |||
|UniProt=O15522 | |UniProt=O15522 | ||
|association_with_transcript=0bp_to_ENST00000258829_5end | |||
|cluster_id=chr14:37051798..37051831,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_1_at_NKX2-8_5end | |||
|id=chr14:37051798..37051831,- | |||
|ontology_enrichment_celltype=CL:0000066!3.36e-25!254;CL:0002076!3.28e-22!43;CL:0000223!4.37e-15!59;CL:0002368!1.37e-13!13;CL:0000082!1.08e-12!19;CL:0002202!3.91e-09!9;CL:0002632!3.91e-09!9;CL:0000076!8.86e-09!62;CL:0000077!1.41e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.17e-16;13!CL:0002076;1.49e-13;42!CL:0002202;4.85e-12;9!CL:0002632;4.85e-12;9!CL:0000082;1.57e-09;19!CL:0002328;6.45e-08;3!CL:0000307;8.44e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.34e-20,42;CL:0000066,2.35e-20,253;CL:0002368,1.30e-16,13;CL:0000223,5.72e-13,58;CL:0002202,5.39e-12,9;CL:0002632,5.39e-12,9;CL:0000082,1.51e-09,19;CL:0002328,6.58e-08,3;CL:0000068,8.61e-08,3;CL:0000069,8.61e-08,3;CL:0000307,8.61e-08,3;CL:0000377,8.61e-08,3;CL:0000076,2.91e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.94e-18;29!CL:0000223;6.74e-08;58!CL:0000377;8.44e-08;3 | |||
|ontology_enrichment_disease=DOID:305!4.71e-27!106;DOID:0050687!5.13e-23!143;DOID:162!8.92e-16!235;DOID:1749!1.19e-15!14;DOID:14566!1.94e-15!239;DOID:0050615!1.48e-09!16;DOID:1324!9.28e-09!15 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.44e-17;14!DOID:0050615;4.95e-07;16!DOID:4362;5.89e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.59e-24,106;DOID:0050687,1.22e-17,143;DOID:1749,1.10e-16,14;DOID:162,4.24e-11,235;DOID:14566,1.35e-10,239;DOID:0050615,5.51e-07,16;DOID:4362,6.75e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.99e-27!72;UBERON:0000065!9.45e-27!53;UBERON:0008947!1.78e-25!38;UBERON:0003258!1.78e-25!38;UBERON:0004119!6.42e-21!169;UBERON:0000925!6.42e-21!169;UBERON:0006595!6.42e-21!169;UBERON:0000072!4.14e-20!46;UBERON:0005153!1.73e-19!37;UBERON:0001007!3.09e-19!155;UBERON:0001555!3.09e-19!155;UBERON:0007026!3.09e-19!155;UBERON:0005178!1.63e-16!34;UBERON:0002224!1.63e-16!34;UBERON:0004921!2.81e-16!129;UBERON:0004185!2.81e-16!129;UBERON:0005181!8.49e-16!35;UBERON:0005157!8.66e-16!51;UBERON:0000077!2.02e-15!130;UBERON:0002048!2.17e-15!22;UBERON:0000117!2.17e-15!22;UBERON:0000171!2.17e-15!22;UBERON:0000170!2.17e-15!22;UBERON:0005597!2.17e-15!22;UBERON:0000118!2.17e-15!22;UBERON:0001041!3.62e-15!98;UBERON:0004802!1.08e-12!19;UBERON:0000115!1.08e-12!19;UBERON:0005911!8.28e-12!82;UBERON:0001737!1.63e-10!9;UBERON:0004807!3.08e-10!28;UBERON:0000915!4.51e-10!52;UBERON:0000063!8.00e-10!97;UBERON:0000064!2.31e-08!219;UBERON:0000464!3.34e-08!104;UBERON:0001557!5.00e-08!19;UBERON:0005177!3.80e-07!107;UBERON:0000481!7.25e-07!347;UBERON:0000062!7.61e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;5.63e-20;44!UBERON:0000072;9.61e-18;37!UBERON:0005178;3.00e-14;34!UBERON:0002224;3.00e-14;34!UBERON:0001737;3.84e-13;9!UBERON:0001557;3.84e-13;9!UBERON:0005181;6.72e-13;35!UBERON:0002048;1.39e-11;22!UBERON:0000117;1.39e-11;22!UBERON:0000171;1.39e-11;22!UBERON:0000170;1.39e-11;22!UBERON:0001004;4.30e-10;65!UBERON:0004802;1.57e-09;19!UBERON:0000115;1.57e-09;19!UBERON:0007196;1.69e-08;15!UBERON:0001558;1.69e-08;15!UBERON:0004807;6.26e-08;22!UBERON:0000485;6.43e-08;7!UBERON:0004815;6.45e-08;3!UBERON:0002031;6.45e-08;3!UBERON:0002298;7.52e-08;6!UBERON:0000915;1.35e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,4.44e-26,38;UBERON:0003258,4.44e-26,38;UBERON:0000065,8.64e-26,54;UBERON:0001004,3.28e-22,74;UBERON:0000072,1.09e-19,47;UBERON:0004119,2.76e-16,160;UBERON:0000925,2.76e-16,160;UBERON:0006595,2.76e-16,160;UBERON:0005178,3.01e-16,34;UBERON:0002224,3.01e-16,34;UBERON:0001007,9.12e-16,145;UBERON:0001555,9.12e-16,145;UBERON:0007026,9.12e-16,145;UBERON:0001041,9.31e-16,87;UBERON:0005181,1.22e-15,35;UBERON:0004921,4.82e-15,118;UBERON:0005153,2.45e-14,37;UBERON:0001737,1.24e-13,9;UBERON:0002048,1.51e-11,22;UBERON:0000117,1.51e-11,22;UBERON:0000171,1.51e-11,22;UBERON:0000170,1.51e-11,22;UBERON:0005597,1.51e-11,22;UBERON:0000118,1.51e-11,22;UBERON:0000915,1.68e-11,52;UBERON:0005157,2.90e-10,47;UBERON:0004802,1.51e-09,19;UBERON:0000115,1.51e-09,19;UBERON:0001557,6.46e-09,19;UBERON:0007196,1.65e-08,15;UBERON:0001558,1.65e-08,15;UBERON:0011216,2.84e-08,223;UBERON:0001048,5.40e-08,160;UBERON:0004815,6.58e-08,3;UBERON:0002031,6.58e-08,3;UBERON:0002298,7.76e-08,6;UBERON:0005911,1.76e-07,82;UBERON:0005177,2.26e-07,101 | |||
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| ||
|short_description=p1@NKX2-8 | |||
}} | }} |
Latest revision as of 22:47, 19 September 2015
Short description: | p1@NKX2-8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKX2-8_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 0bp_to_ENST00000258829_5end |
EntrezGene: | NKX2-8 |
HGNC: | 16364 |
UniProt: | O15522 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.34e-20 | 42 |
epithelial cell | 2.35e-20 | 253 |
respiratory epithelial cell | 1.30e-16 | 13 |
endodermal cell | 5.72e-13 | 58 |
epithelial cell of tracheobronchial tree | 5.39e-12 | 9 |
epithelial cell of lower respiratory tract | 5.39e-12 | 9 |
epithelial cell of lung | 1.51e-09 | 19 |
bronchial epithelial cell | 6.58e-08 | 3 |
duct epithelial cell | 8.61e-08 | 3 |
branched duct epithelial cell | 8.61e-08 | 3 |
tracheal epithelial cell | 8.61e-08 | 3 |
tracheoblast | 8.61e-08 | 3 |
squamous epithelial cell | 2.91e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.59e-24 | 106 |
cell type cancer | 1.22e-17 | 143 |
squamous cell carcinoma | 1.10e-16 | 14 |
cancer | 4.24e-11 | 235 |
disease of cellular proliferation | 1.35e-10 | 239 |
respiratory system cancer | 5.51e-07 | 16 |
cervical cancer | 6.75e-07 | 5 |