FFCP PHASE1:Hg19::chr12:65218382..65218457,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:65218382..65218457,+ to FFCP PHASE1:Hg19::chr12:65218382..65218457,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23329 | |EntrezGene=23329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29164 | |HGNC=29164 | ||
|TSSclassifier=strong | |||
|UniProt=E7ES83,E7EMW4,F5H7L7,F5H0E8 | |UniProt=E7ES83,E7EMW4,F5H7L7,F5H0E8 | ||
|association_with_transcript=0bp_to_ENST00000411580,ENST00000455166,ENST00000539120,ENST00000544457,uc001ssi.1,uc010sss.1,uc010sst.1_5end | |||
|cluster_id=chr12:65218382..65218457,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_TBC1D30_5end | |||
|id=chr12:65218382..65218457,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.51e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.34e-15;82!UBERON:0006215;4.90e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.80e-48!82;UBERON:0005743!9.33e-48!86;UBERON:0000073!1.17e-46!94;UBERON:0001016!1.17e-46!94;UBERON:0001049!4.64e-43!57;UBERON:0005068!4.64e-43!57;UBERON:0006241!4.64e-43!57;UBERON:0007135!4.64e-43!57;UBERON:0000955!7.84e-37!69;UBERON:0006238!7.84e-37!69;UBERON:0002616!3.64e-35!59;UBERON:0002780!3.06e-34!41;UBERON:0001890!3.06e-34!41;UBERON:0006240!3.06e-34!41;UBERON:0003080!4.05e-33!42;UBERON:0003075!1.03e-32!86;UBERON:0007284!1.03e-32!86;UBERON:0002346!2.16e-30!90;UBERON:0001869!6.68e-30!32;UBERON:0001893!1.28e-29!34;UBERON:0002020!1.64e-29!34;UBERON:0003528!1.64e-29!34;UBERON:0002791!2.30e-28!33;UBERON:0002619!4.30e-26!22;UBERON:0007023!3.09e-25!115;UBERON:0003056!7.56e-24!61;UBERON:0001950!7.76e-24!20;UBERON:0000956!4.24e-22!25;UBERON:0000203!4.24e-22!25;UBERON:0004121!3.27e-20!169;UBERON:0000924!3.13e-19!173;UBERON:0006601!3.13e-19!173;UBERON:0000033!2.16e-16!123;UBERON:0000153!7.49e-15!129;UBERON:0007811!7.49e-15!129;UBERON:0003076!7.52e-11!15;UBERON:0003057!7.52e-11!15;UBERON:0000064!1.37e-10!219;UBERON:0002420!6.77e-09!9;UBERON:0007245!6.77e-09!9;UBERON:0010009!6.77e-09!9;UBERON:0010011!6.77e-09!9;UBERON:0000454!6.77e-09!9;UBERON:0000025!7.66e-09!194;UBERON:0002308!8.22e-09!9;UBERON:0000125!8.22e-09!9;UBERON:0000200!9.27e-09!6;UBERON:0001871!3.39e-08!7;UBERON:0004733!5.12e-08!12;UBERON:0002028!5.12e-08!12;UBERON:0007277!5.12e-08!12;UBERON:0002021!1.12e-07!5;UBERON:0001872!1.27e-07!5;UBERON:0004732!3.23e-07!13;UBERON:0000349!3.32e-07!5;UBERON:0009663!8.53e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.04e-45;32!UBERON:0001893;6.74e-44;34!UBERON:0003528;1.63e-43;34!UBERON:0002020;1.63e-43;34!UBERON:0002619;1.71e-43;22!UBERON:0002791;2.27e-42;32!UBERON:0002780;2.78e-40;41!UBERON:0001890;2.78e-40;41!UBERON:0001950;1.22e-39;20!UBERON:0000073;4.34e-39;53!UBERON:0002616;4.34e-39;53!UBERON:0000956;1.14e-37;25!UBERON:0000203;1.14e-37;25!UBERON:0000955;6.66e-28;68!UBERON:0001017;1.04e-27;75!UBERON:0001016;2.21e-25;83!UBERON:0002420;2.71e-14;9!UBERON:0007245;2.71e-14;9!UBERON:0010009;2.71e-14;9!UBERON:0010011;2.71e-14;9!UBERON:0000454;2.71e-14;9!UBERON:0000125;3.71e-14;9!UBERON:0002308;3.71e-14;9!UBERON:0000200;9.50e-14;6!UBERON:0004733;2.31e-13;12!UBERON:0002028;2.31e-13;12!UBERON:0004732;3.46e-12;13!UBERON:0002298;3.75e-12;6!UBERON:0002021;7.08e-12;5!UBERON:0001872;8.75e-12;5!UBERON:0001871;2.87e-11;6!UBERON:0000349;4.14e-11;5!UBERON:0009663;9.57e-11;7!UBERON:0007023;1.40e-10;114!UBERON:0011216;3.12e-10;132!UBERON:0000369;1.55e-09;4!UBERON:0002435;1.55e-09;4!UBERON:0000204;1.55e-09;4!UBERON:0002680;8.90e-09;9!UBERON:0001895;8.90e-09;9!UBERON:0001870;8.77e-08;3!UBERON:0005383;1.77e-07;3!UBERON:0005382;1.77e-07;3!UBERON:0000988;2.99e-07;3!UBERON:0001894;6.01e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.04e-74,56;UBERON:0005068,6.04e-74,56;UBERON:0006241,6.04e-74,56;UBERON:0007135,6.04e-74,56;UBERON:0001017,3.11e-70,81;UBERON:0001016,3.61e-70,89;UBERON:0000073,1.32e-68,53;UBERON:0002616,1.32e-68,53;UBERON:0000955,5.37e-61,68;UBERON:0006238,5.37e-61,68;UBERON:0002780,4.26e-56,41;UBERON:0001890,4.26e-56,41;UBERON:0003080,4.26e-56,41;UBERON:0006240,4.26e-56,41;UBERON:0001869,5.64e-51,32;UBERON:0001893,8.60e-51,34;UBERON:0003528,1.32e-50,34;UBERON:0002020,1.32e-50,34;UBERON:0003075,1.49e-48,82;UBERON:0007284,1.49e-48,82;UBERON:0002791,4.63e-47,32;UBERON:0002346,1.15e-45,86;UBERON:0002619,1.77e-43,22;UBERON:0001950,1.21e-39,20;UBERON:0010371,1.92e-39,104;UBERON:0000956,1.17e-37,25;UBERON:0000203,1.17e-37,25;UBERON:0003056,1.12e-36,61;UBERON:0004121,3.61e-32,171;UBERON:0000924,3.61e-32,171;UBERON:0006601,3.61e-32,171;UBERON:0007023,4.00e-31,114;UBERON:0010314,9.18e-28,132;UBERON:0011216,5.70e-27,223;UBERON:0003076,3.86e-18,15;UBERON:0003057,3.86e-18,15;UBERON:0000025,7.35e-16,192;UBERON:0002420,2.76e-14,9;UBERON:0007245,2.76e-14,9;UBERON:0010009,2.76e-14,9;UBERON:0010011,2.76e-14,9;UBERON:0000454,2.76e-14,9;UBERON:0000125,3.85e-14,9;UBERON:0002308,3.85e-14,9;UBERON:0000200,1.03e-13,6;UBERON:0004733,2.64e-13,12;UBERON:0002028,2.64e-13,12;UBERON:0007277,2.64e-13,12;UBERON:0004732,3.91e-12,13;UBERON:0002298,4.52e-12,6;UBERON:0002021,6.85e-12,5;UBERON:0001872,8.37e-12,5;UBERON:0004111,1.76e-11,240;UBERON:0001871,3.06e-11,6;UBERON:0000349,4.23e-11,5;UBERON:0009663,9.75e-11,7;UBERON:0000369,1.46e-09,4;UBERON:0002435,1.46e-09,4;UBERON:0000204,1.46e-09,4;UBERON:0010082,1.46e-09,4;UBERON:0002680,9.15e-09,9;UBERON:0001895,9.15e-09,9;UBERON:0010092,9.15e-09,9;UBERON:0001870,8.77e-08,3;UBERON:0005383,1.71e-07,3;UBERON:0005382,1.71e-07,3;UBERON:0000483,2.27e-07,306;UBERON:0000988,3.16e-07,3;UBERON:0000119,3.52e-07,309;UBERON:0001894,4.98e-07,7;UBERON:0006222,4.98e-07,7 | |||
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|short_description=p1@TBC1D30 | |||
}} | }} |
Latest revision as of 21:45, 19 September 2015
Short description: | p1@TBC1D30 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBC1D30_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000411580, ENST00000455166, ENST00000539120, ENST00000544457, uc001ssi.1, uc010sss.1, uc010sst.1_5end |
EntrezGene: | TBC1D30 |
HGNC: | 29164 |
UniProt: | E7ES83E7EMW4F5H7L7F5H0E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data