FFCP PHASE1:Hg19::chr9:103235453..103235470,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:103235453..103235470,+
|short_description=p3@TMEFF1
|description=CAGE_peak_3_at_TMEFF1_5end
|association_with_transcript=-49bp_to_NM_003692_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8577 | |EntrezGene=8577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11866 | |HGNC=11866 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYR6 | |UniProt=Q8IYR6 | ||
|association_with_transcript=-49bp_to_NM_003692_5end | |||
|cluster_id=chr9:103235453..103235470,+ | |||
|coexpression_cluster_id=C4786 | |||
|description=CAGE_peak_3_at_TMEFF1_5end | |||
|id=chr9:103235453..103235470,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.25e-11!24;CL:0002319!2.69e-10!25;CL:0000047!2.15e-08!8;CL:0000133!2.27e-08!59;CL:0000071!2.39e-07!18;CL:0002546!2.39e-07!18;CL:0000115!2.71e-07!35;CL:0000540!8.45e-07!6;CL:0000031!8.45e-07!6;CL:0000404!8.45e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.03e-11;6!CL:0000404;1.03e-11;6!CL:0002322;3.48e-10;5!CL:0002319;1.53e-09;25!CL:0002138;6.91e-09;6!CL:0002321;1.69e-08;15!CL:0000039;4.92e-08;7!CL:0000586;4.92e-08;7!CL:0002139;1.13e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.51e-15,8;CL:0000540,1.02e-11,6;CL:0000031,1.02e-11,6;CL:0000404,1.02e-11,6;CL:0002322,3.38e-10,5;CL:0002319,1.39e-09,25;CL:0005020,5.93e-09,6;CL:0002138,5.93e-09,6;CL:0005022,5.93e-09,6;CL:0000039,7.19e-08,7;CL:0000586,7.19e-08,7;CL:0002139,8.76e-08,24;CL:0000133,3.22e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.03e-11;6!CL:0005022;6.91e-09;6!UBERON:0006601;8.55e-09;82!UBERON:0009117;1.80e-07;10!UBERON:0005564;1.80e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!7.11e-11!22;DOID:2994!7.11e-11!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.59e-10;22!DOID:2994;6.59e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.13e-10,22;DOID:2994,8.13e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.30e-34!94;UBERON:0001016!1.30e-34!94;UBERON:0005743!7.08e-31!86;UBERON:0001017!1.06e-29!82;UBERON:0001049!6.26e-23!57;UBERON:0005068!6.26e-23!57;UBERON:0006241!6.26e-23!57;UBERON:0007135!6.26e-23!57;UBERON:0000955!1.58e-21!69;UBERON:0006238!1.58e-21!69;UBERON:0002346!3.56e-20!90;UBERON:0003075!1.06e-18!86;UBERON:0007284!1.06e-18!86;UBERON:0002780!2.28e-18!41;UBERON:0001890!2.28e-18!41;UBERON:0006240!2.28e-18!41;UBERON:0001893!3.07e-18!34;UBERON:0002020!3.38e-18!34;UBERON:0003528!3.38e-18!34;UBERON:0003080!1.41e-17!42;UBERON:0002791!1.61e-17!33;UBERON:0002616!1.89e-17!59;UBERON:0000924!2.79e-17!173;UBERON:0006601!2.79e-17!173;UBERON:0001869!1.10e-16!32;UBERON:0003056!3.24e-16!61;UBERON:0004121!5.02e-16!169;UBERON:0000025!1.17e-13!194;UBERON:0000153!4.18e-12!129;UBERON:0007811!4.18e-12!129;UBERON:0000033!6.02e-12!123;UBERON:0000956!8.73e-12!25;UBERON:0000203!8.73e-12!25;UBERON:0004111!2.59e-11!241;UBERON:0002619!2.37e-10!22;UBERON:0001950!3.94e-09!20;UBERON:0000119!1.23e-08!312;UBERON:0002308!2.94e-08!9;UBERON:0000125!2.94e-08!9;UBERON:0000483!3.07e-08!309;UBERON:0000477!4.08e-08!286;UBERON:0001986!2.39e-07!18;UBERON:0004638!2.39e-07!18;UBERON:0004852!2.39e-07!18;UBERON:0000468!4.23e-07!659;UBERON:0009663!9.63e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.85e-27;34!UBERON:0003528;8.32e-27;34!UBERON:0002020;8.32e-27;34!UBERON:0002791;1.49e-25;32!UBERON:0001869;1.84e-25;32!UBERON:0002780;6.11e-23;41!UBERON:0001890;6.11e-23;41!UBERON:0000073;1.96e-21;53!UBERON:0002616;1.96e-21;53!UBERON:0000956;9.70e-20;25!UBERON:0000203;9.70e-20;25!UBERON:0002619;1.45e-18;22!UBERON:0001017;6.74e-17;75!UBERON:0001016;1.05e-16;83!UBERON:0000955;1.70e-16;68!UBERON:0001950;3.20e-16;20!UBERON:0000125;1.99e-14;9!UBERON:0002308;1.99e-14;9!UBERON:0009663;1.60e-11;7!UBERON:0002298;2.43e-10;6!UBERON:0002420;1.18e-08;9!UBERON:0007245;1.18e-08;9!UBERON:0010009;1.18e-08;9!UBERON:0010011;1.18e-08;9!UBERON:0000454;1.18e-08;9!UBERON:0001872;2.76e-08;5!UBERON:0004732;2.79e-07;13!UBERON:0000369;5.79e-07;4!UBERON:0002435;5.79e-07;4!UBERON:0000204;5.79e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.44e-53,89;UBERON:0001017,6.03e-50,81;UBERON:0001049,7.48e-41,56;UBERON:0005068,7.48e-41,56;UBERON:0006241,7.48e-41,56;UBERON:0007135,7.48e-41,56;UBERON:0000073,1.05e-36,53;UBERON:0002616,1.05e-36,53;UBERON:0000955,3.49e-34,68;UBERON:0006238,3.49e-34,68;UBERON:0002780,2.84e-32,41;UBERON:0001890,2.84e-32,41;UBERON:0003080,2.84e-32,41;UBERON:0006240,2.84e-32,41;UBERON:0001893,3.66e-32,34;UBERON:0003528,4.39e-32,34;UBERON:0002020,4.39e-32,34;UBERON:0003075,5.37e-30,82;UBERON:0007284,5.37e-30,82;UBERON:0002346,2.84e-29,86;UBERON:0002791,3.06e-29,32;UBERON:0001869,3.61e-29,32;UBERON:0004121,2.51e-25,171;UBERON:0000924,2.51e-25,171;UBERON:0006601,2.51e-25,171;UBERON:0003056,7.05e-25,61;UBERON:0010371,3.35e-23,104;UBERON:0000956,8.71e-20,25;UBERON:0000203,8.71e-20,25;UBERON:0002619,1.31e-18,22;UBERON:0011216,1.50e-18,223;UBERON:0001950,3.02e-16,20;UBERON:0000125,1.56e-14,9;UBERON:0002308,1.56e-14,9;UBERON:0010314,2.58e-14,132;UBERON:0000025,2.76e-13,192;UBERON:0007023,1.23e-12,114;UBERON:0004111,3.60e-12,240;UBERON:0009663,1.31e-11,7;UBERON:0002298,2.35e-10,6;UBERON:0003076,1.18e-09,15;UBERON:0003057,1.18e-09,15;UBERON:0002420,1.01e-08,9;UBERON:0007245,1.01e-08,9;UBERON:0010009,1.01e-08,9;UBERON:0010011,1.01e-08,9;UBERON:0000454,1.01e-08,9;UBERON:0001872,2.37e-08,5;UBERON:0004732,2.70e-07,13;UBERON:0000369,4.45e-07,4;UBERON:0002435,4.45e-07,4;UBERON:0000204,4.45e-07,4;UBERON:0010082,4.45e-07,4 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,0.369363174230364,0,0,2.0036519099174,0.410623275218653,1.63205431473244,0,0,0,0,0,0,0,0,0,0,1.27952309238679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.472674085820339,0,0.43917392846563,1.0478326039817,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,1.13061588384802,0.419499436209906,1.92582629358047,0.835979866147242,3.87625138753993,6.75955899104749,3.68192674041137,2.81980521976403,1.52054421143703,4.63717909341522,0.735326160691737,1.62028389576352,0.892997282840798,0.44905874525234,0.337834441449967,0,0.949265659568129,2.38162267109529,0,0,0,0,0.25326102332916,0.132409180813219,0.860509862246441,1.41867352879343,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0.352303495931295,0,0.140450806702248,0,0.122834317311768,0,2.37600571456411,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0,0,0.358779271377724,0.427114777637135,0,0,0.103052529238439,0,0,0.168776332241266,0.292311015483596,0,0.184099797284599,1.45481451136931,0,0.201504196455281,0,0.193260853163297,0,0,15.368686972329,20.9397033947947,14.0594670872117,12.7503097668906,15.8962136051646,15.3290490811849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.882926198829301,0.860919069801795,0.857839051492628,0,0,0,0,0,0,0,4.63721619900307,0.117408694235822,1.29929802984966,1.85194205030644,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.308482478109971,0,0.571652865261156,0.112131084345361,0.43596006883328,0.1466765716419,0.387815147273333,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,3.30323011489202,23.4251736943719,16.2390650683316,15.2439801454257,13.3967137847164,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0.604780586659361,0.496215615637554,0.306923946576125,0.280660094433074,0.384417447767103,0,0.64341568457443,0,0,0.177561725313127,0,0,0,0.725156697549733,0,0,0.229628896329213,0,0.262248829918848,0.902399225814824,2.38747545023686,1.56869953835371,1.46139224653261,0.316654886678627,0,0.510281115829547,0.863663664408557,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,2.27764876265012,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.534192213880424,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,1.92495971052672,0,0,0.144269212976445,1.42283686696828,0.478278818186467,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.984685914873589,0,0,1.26675244876796,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,3.87733098438087,2.69027484669369,5.98841394003583,0,0,0,0,0,0,2.41320361269025,0.583209226766509,2.95162491386597,7.97167247232455,1.68835014075571,0,0.552896299656123,1.47773809476774,1.75508317723178,0,0,0,0,1.1528195219403,1.34636466614658,0.869178975376065,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0.282706142867882,1.08194319871046,0,0.0884575645033392,0,0,0,0,10.4471756120049,0,10.5419000576403,0.182454789215666,0.19566461893209,0.242780379534093,0,0,10.7125466570672,0,0.150323419414493,0.207376382794494,0,0,0,0,2.27687636823834,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0.171986032471617,0,0,0,0,0.176512253383001,0.90392296312213,0,0.19871461170299,4.11520173713212,0,0.0801588202515337,0,0,0,0.458146384663663,1.88754497648161,0,0,0,0.271808412147228,0.627617077873999,0,0.577901179803038,4.20294202096853,9.44647114354752,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0,0.268733889946905,0.360299883542404,2.32991899054908,0.393915911536118,0.494495150286999,0.404421263125109,0,0,2.38568906942791,2.72406812223151,14.9500428072468,12.92870704014,9.97056811270044,0,0,2.49073182297901,0,0,1.10154635083496,0,0,0,0,0.662091970365432,5.84817636605925,0,0,0,0,0,0,0.113312091520126,0,0,4.78346938537737,5.68600187493567,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46431517882356,2.1282458220105,4.0138643698305,3.77158775225298,6.33383310002111,3.597064508342,0.37494122388632,0,0.285465333544967,0,1.87333962322753,7.39097245915208,0,0.233713309847224,0,0,0.251567901752575,0,0.457680136793847,0,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0,0,0.181848659202559,0,0.464033759878494,0,0.40002776466315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| ||
|short_description=p3@TMEFF1 | |||
}} | }} |
Latest revision as of 21:07, 19 September 2015
Short description: | p3@TMEFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEFF1_5end |
Coexpression cluster: | C4786_occipital_H9_parietal_Neural_duodenum_Neurons_temporal |
Association with transcript: | -49bp_to_NM_003692_5end |
EntrezGene: | TMEFF1 |
HGNC: | 11866 |
UniProt: | Q8IYR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.51e-15 | 8 |
neuron | 1.02e-11 | 6 |
neuroblast | 1.02e-11 | 6 |
electrically signaling cell | 1.02e-11 | 6 |
embryonic stem cell | 3.38e-10 | 5 |
neural cell | 1.39e-09 | 25 |
lymphangioblast | 5.93e-09 | 6 |
endothelial cell of lymphatic vessel | 5.93e-09 | 6 |
vascular lymphangioblast | 5.93e-09 | 6 |
germ line cell | 7.19e-08 | 7 |
germ cell | 7.19e-08 | 7 |
endothelial cell of vascular tree | 8.76e-08 | 24 |
neurectodermal cell | 3.22e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.13e-10 | 22 |
germ cell cancer | 8.13e-10 | 22 |