FFCP PHASE1:Hg19::chr5:115872159..115872172,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57556 | |EntrezGene=57556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10738 | |HGNC=10738 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000510263_5end | |association_with_transcript=-5bp_to_ENST00000510263_5end | ||
|cluster_id=chr5:115872159..115872172,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_9_at_SEMA6A_5end | |description=CAGE_peak_9_at_SEMA6A_5end | ||
|id=chr5:115872159..115872172,- | |id=chr5:115872159..115872172,- | ||
|ontology_enrichment_celltype=CL:0000313!2.26e-09!1 | |ontology_enrichment_celltype=CL:0000313!2.26e-09!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.45e-26;1 | |||
|ontology_enrichment_disease=DOID:4960!8.17e-10!1;DOID:0070004!8.17e-10!1;DOID:2152!2.26e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.51e-14!27;UBERON:0002771!8.68e-12!3;UBERON:0005409!8.95e-11!35;UBERON:0001871!7.15e-10!7;UBERON:0004911!2.26e-09!1;UBERON:0001155!4.56e-09!9;UBERON:0000059!1.67e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.83e-22;17!UBERON:0002108;1.21e-20;4!UBERON:0005409;1.48e-17;22!UBERON:0001155;6.16e-12;9!UBERON:0004921;7.98e-11;33!UBERON:0000059;6.06e-10;11!UBERON:0002114;1.53e-09;2!UBERON:0001987;1.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.68e-22,17;UBERON:0002108,1.48e-20,4;UBERON:0005409,1.31e-15,25;UBERON:0001155,5.22e-12,9;UBERON:0000059,5.29e-10,11;UBERON:0002114,1.54e-09,2;UBERON:0001987,1.40e-07,4;UBERON:0004340,1.40e-07,4 | |||
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|short_description=p9@SEMA6A | |short_description=p9@SEMA6A | ||
}} | }} |
Latest revision as of 20:41, 19 September 2015
Short description: | p9@SEMA6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SEMA6A_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -5bp_to_ENST00000510263_5end |
EntrezGene: | SEMA6A |
HGNC: | 10738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.68e-22 | 17 |
small intestine | 1.48e-20 | 4 |
gastrointestinal system | 1.31e-15 | 25 |
colon | 5.22e-12 | 9 |
large intestine | 5.29e-10 | 11 |
duodenum | 1.54e-09 | 2 |
placenta | 1.40e-07 | 4 |
allantois | 1.40e-07 | 4 |