FFCP PHASE1:Hg19::chr22:30970644..30970658,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:30970644..30970658,- to FFCP PHASE1:Hg19::chr22:30970644..30970658,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9514 | |EntrezGene=9514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24240 | |HGNC=24240 | ||
|TSSclassifier=strong | |||
|UniProt=Q99999 | |UniProt=Q99999 | ||
|association_with_transcript=-70bp_to_ENST00000406361_5end | |||
|cluster_id=chr22:30970644..30970658,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_GAL3ST1_5end | |||
|id=chr22:30970644..30970658,- | |||
|ontology_enrichment_celltype=CL:1000507!1.85e-08!12;CL:1000494!1.85e-08!12;CL:1000497!1.46e-07!18;CL:0002518!1.46e-07!18;CL:1000449!3.85e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.66e-14;10!CL:1000494;1.66e-14;10!CL:1000497;3.95e-11;17!CL:0002518;3.95e-11;17!CL:0000650;1.21e-09;2!CL:1000500;1.21e-09;2!CL:1000618;1.21e-09;2!CL:1001318;1.21e-09;2!CL:0002173;1.21e-09;2!CL:1000449;1.89e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.42e-14,10;CL:1000494,2.42e-14,10;CL:1000497,4.99e-11,17;CL:0002518,4.99e-11,17;CL:0000650,1.60e-09,2;CL:1000500,1.60e-09,2;CL:1000618,1.60e-09,2;CL:1001318,1.60e-09,2;CL:0002173,1.60e-09,2;CL:1000449,2.41e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.05e-13;3!UBERON:0003057;3.05e-13;3!UBERON:0006601;2.05e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.35e-40!115;UBERON:0001049!9.89e-35!57;UBERON:0005068!9.89e-35!57;UBERON:0006241!9.89e-35!57;UBERON:0007135!9.89e-35!57;UBERON:0002616!7.04e-29!59;UBERON:0001017!2.80e-28!82;UBERON:0003075!3.23e-28!86;UBERON:0007284!3.23e-28!86;UBERON:0001893!1.04e-27!34;UBERON:0002020!1.17e-27!34;UBERON:0003528!1.17e-27!34;UBERON:0005743!2.57e-27!86;UBERON:0002780!3.04e-27!41;UBERON:0001890!3.04e-27!41;UBERON:0006240!3.04e-27!41;UBERON:0002791!1.92e-26!33;UBERON:0000955!2.05e-26!69;UBERON:0006238!2.05e-26!69;UBERON:0003080!2.47e-26!42;UBERON:0002346!3.41e-26!90;UBERON:0001869!4.16e-25!32;UBERON:0000073!1.50e-24!94;UBERON:0001016!1.50e-24!94;UBERON:0003056!2.33e-20!61;UBERON:0002619!3.27e-20!22;UBERON:0000025!3.98e-18!194;UBERON:0001950!4.02e-18!20;UBERON:0000956!4.45e-17!25;UBERON:0000203!4.45e-17!25;UBERON:0000064!1.66e-15!219;UBERON:0004111!4.96e-15!241;UBERON:0000483!5.76e-14!309;UBERON:0000481!6.12e-14!347;UBERON:0000033!9.94e-14!123;UBERON:0000119!1.40e-13!312;UBERON:0000477!5.30e-13!286;UBERON:0002308!9.14e-13!9;UBERON:0000125!9.14e-13!9;UBERON:0000153!2.05e-12!129;UBERON:0007811!2.05e-12!129;UBERON:0002420!2.59e-12!9;UBERON:0007245!2.59e-12!9;UBERON:0010009!2.59e-12!9;UBERON:0010011!2.59e-12!9;UBERON:0000454!2.59e-12!9;UBERON:0000062!3.75e-12!511;UBERON:0004121!2.16e-11!169;UBERON:0000924!9.25e-11!173;UBERON:0006601!9.25e-11!173;UBERON:0009663!4.29e-10!7;UBERON:0003076!2.01e-09!15;UBERON:0003057!2.01e-09!15;UBERON:0000489!7.09e-09!32;UBERON:0009773!1.85e-08!12;UBERON:0001231!1.85e-08!12;UBERON:0004810!1.85e-08!12;UBERON:0001871!2.87e-08!7;UBERON:0000922!3.69e-08!612;UBERON:0000475!3.88e-08!365;UBERON:0005172!1.56e-07!55;UBERON:0005173!1.56e-07!55;UBERON:0000349!3.45e-07!5;UBERON:0004732!3.46e-07!13;UBERON:0004211!3.85e-07!16;UBERON:0001285!3.85e-07!16;UBERON:0007684!3.85e-07!16;UBERON:0003220!3.85e-07!16;UBERON:0004208!3.85e-07!16;UBERON:0002298!8.52e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.89e-29;34!UBERON:0003528;6.27e-29;34!UBERON:0002020;6.27e-29;34!UBERON:0002780;3.20e-25;41!UBERON:0001890;3.20e-25;41!UBERON:0001869;2.64e-24;32!UBERON:0002791;1.13e-23;32!UBERON:0000125;1.72e-21;9!UBERON:0002308;1.72e-21;9!UBERON:0001950;4.98e-21;20!UBERON:0000073;3.16e-20;53!UBERON:0002616;3.16e-20;53!UBERON:0002619;5.30e-19;22!UBERON:0000489;6.77e-18;29!UBERON:0000956;1.51e-16;25!UBERON:0000203;1.51e-16;25!UBERON:0002420;1.35e-15;9!UBERON:0007245;1.35e-15;9!UBERON:0010009;1.35e-15;9!UBERON:0010011;1.35e-15;9!UBERON:0000454;1.35e-15;9!UBERON:0001016;1.11e-14;83!UBERON:0004211;1.66e-14;10!UBERON:0009773;1.66e-14;10!UBERON:0001231;1.66e-14;10!UBERON:0004810;1.66e-14;10!UBERON:0009663;2.35e-14;7!UBERON:0000988;1.63e-13;3!UBERON:0001017;2.19e-13;75!UBERON:0002240;3.05e-13;3!UBERON:0005174;3.05e-13;3!UBERON:0001137;3.05e-13;3!UBERON:0000955;1.05e-12;68!UBERON:0002113;2.92e-12;24!UBERON:0011143;2.92e-12;24!UBERON:0002298;9.02e-12;6!UBERON:0007023;4.47e-10;114!UBERON:0005162;9.21e-10;2!UBERON:0000122;9.21e-10;2!UBERON:0003567;1.21e-09;2!UBERON:0003838;1.21e-09;2!UBERON:0003586;1.21e-09;2!UBERON:0005169;1.21e-09;2!UBERON:0002321;1.21e-09;2!UBERON:0005215;1.21e-09;2!UBERON:0002303;1.21e-09;2!UBERON:0002319;1.21e-09;2!UBERON:0006554;1.75e-09;30!UBERON:0001008;1.75e-09;30!UBERON:0002148;1.89e-09;2!UBERON:0006331;1.89e-09;2!UBERON:0009662;1.89e-09;2!UBERON:0006555;1.89e-09;15!UBERON:0004819;1.89e-09;15!UBERON:0001285;1.89e-09;15!UBERON:0007684;1.89e-09;15!UBERON:0001875;2.47e-09;2!UBERON:0006514;2.47e-09;2!UBERON:0001871;3.03e-09;6!UBERON:0001872;2.83e-08;5!UBERON:0004732;4.67e-08;13!UBERON:0005172;4.55e-07;52!UBERON:0005173;4.55e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.04e-46,56;UBERON:0005068,2.04e-46,56;UBERON:0006241,2.04e-46,56;UBERON:0007135,2.04e-46,56;UBERON:0000073,3.73e-38,53;UBERON:0002616,3.73e-38,53;UBERON:0001017,6.74e-35,81;UBERON:0002780,4.53e-34,41;UBERON:0001890,4.53e-34,41;UBERON:0003080,4.53e-34,41;UBERON:0006240,4.53e-34,41;UBERON:0001893,2.06e-33,34;UBERON:0003528,2.57e-33,34;UBERON:0002020,2.57e-33,34;UBERON:0001016,2.58e-33,89;UBERON:0003075,2.23e-32,82;UBERON:0007284,2.23e-32,82;UBERON:0000955,9.18e-31,68;UBERON:0006238,9.18e-31,68;UBERON:0002346,1.43e-30,86;UBERON:0001869,1.23e-27,32;UBERON:0002791,1.27e-27,32;UBERON:0007023,2.51e-25,114;UBERON:0010371,3.76e-24,104;UBERON:0003056,5.27e-24,61;UBERON:0000125,1.04e-21,9;UBERON:0002308,1.04e-21,9;UBERON:0001950,5.17e-21,20;UBERON:0010314,4.10e-19,132;UBERON:0002619,5.49e-19,22;UBERON:0000025,4.14e-18,192;UBERON:0000489,1.52e-16,31;UBERON:0000956,1.56e-16,25;UBERON:0000203,1.56e-16,25;UBERON:0002420,7.41e-16,9;UBERON:0007245,7.41e-16,9;UBERON:0010009,7.41e-16,9;UBERON:0010011,7.41e-16,9;UBERON:0000454,7.41e-16,9;UBERON:0004121,2.06e-15,171;UBERON:0000924,2.06e-15,171;UBERON:0006601,2.06e-15,171;UBERON:0009663,1.65e-14,7;UBERON:0004810,2.42e-14,10;UBERON:0004111,6.62e-14,240;UBERON:0000988,1.42e-13,3;UBERON:0002240,2.15e-13,3;UBERON:0005174,2.15e-13,3;UBERON:0001137,2.15e-13,3;UBERON:0003076,3.99e-13,15;UBERON:0003057,3.99e-13,15;UBERON:0011216,4.74e-13,223;UBERON:0002298,8.46e-12,6;UBERON:0002113,4.04e-11,26;UBERON:0003918,4.04e-11,26;UBERON:0011143,4.04e-11,26;UBERON:0005095,4.04e-11,26;UBERON:0007687,4.04e-11,26;UBERON:0000483,6.80e-11,306;UBERON:0000119,1.05e-10,309;UBERON:0005162,6.85e-10,2;UBERON:0000122,6.85e-10,2;UBERON:0002148,1.60e-09,2;UBERON:0006331,1.60e-09,2;UBERON:0009662,1.60e-09,2;UBERON:0003567,1.60e-09,2;UBERON:0003838,1.60e-09,2;UBERON:0003586,1.60e-09,2;UBERON:0005169,1.60e-09,2;UBERON:0002321,1.60e-09,2;UBERON:0005215,1.60e-09,2;UBERON:0002303,1.60e-09,2;UBERON:0002319,1.60e-09,2;UBERON:0001871,2.20e-09,6;UBERON:0001875,2.24e-09,2;UBERON:0006514,2.24e-09,2;UBERON:0004211,2.41e-09,15;UBERON:0009773,2.41e-09,15;UBERON:0001231,2.41e-09,15;UBERON:0001285,2.41e-09,15;UBERON:0007684,2.41e-09,15;UBERON:0004208,2.41e-09,15;UBERON:0006555,1.02e-08,16;UBERON:0004819,1.02e-08,16;UBERON:0005172,3.21e-08,54;UBERON:0005173,3.21e-08,54;UBERON:0001872,3.58e-08,5;UBERON:0004732,4.06e-08,13;UBERON:0002417,3.67e-07,60;UBERON:0000916,3.67e-07,60 | |||
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| ||
|short_description=p4@GAL3ST1 | |||
}} | }} |
Latest revision as of 18:32, 19 September 2015
Short description: | p4@GAL3ST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GAL3ST1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -70bp_to_ENST00000406361_5end |
EntrezGene: | GAL3ST1 |
HGNC: | 24240 |
UniProt: | Q99999 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.42e-14 | 10 |
nephron tubule epithelial cell | 2.42e-14 | 10 |
kidney cell | 4.99e-11 | 17 |
kidney epithelial cell | 4.99e-11 | 17 |
mesangial cell | 1.60e-09 | 2 |
kidney interstitial cell | 1.60e-09 | 2 |
juxtaglomerular complex cell | 1.60e-09 | 2 |
renal interstitial pericyte | 1.60e-09 | 2 |
extraglomerular mesangial cell | 1.60e-09 | 2 |
epithelial cell of nephron | 2.41e-09 | 15 |