FFCP PHASE1:Hg19::chr14:33403779..33403793,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:33403779..33403793,+ to FFCP PHASE1:Hg19::chr14:33403779..33403793,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64067 | |EntrezGene=64067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19311 | |HGNC=19311 | ||
|TSSclassifier=strong | |||
|UniProt=F8VR32,F8VS42 | |UniProt=F8VR32,F8VS42 | ||
|association_with_transcript=-345bp_to_ENST00000551492,ENST00000551634_5end | |||
|cluster_id=chr14:33403779..33403793,+ | |||
|coexpression_cluster_id=C1030 | |||
|description=CAGE_peak_6_at_NPAS3_5end | |||
|id=chr14:33403779..33403793,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.30e-08!25;CL:0000047!9.99e-08!8;CL:0002605!4.39e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.23e-11;3!CL:0000047;5.21e-08;2!CL:0002319;9.81e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.22e-11,3;CL:0000047,4.10e-10,8;CL:0002319,9.35e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.58e-14;82!UBERON:0010122;1.20e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.57e-74!82;UBERON:0005743!1.19e-69!86;UBERON:0001049!3.22e-68!57;UBERON:0005068!3.22e-68!57;UBERON:0006241!3.22e-68!57;UBERON:0007135!3.22e-68!57;UBERON:0000073!3.19e-63!94;UBERON:0001016!3.19e-63!94;UBERON:0000955!1.00e-59!69;UBERON:0006238!1.00e-59!69;UBERON:0002616!1.03e-56!59;UBERON:0003075!9.39e-53!86;UBERON:0007284!9.39e-53!86;UBERON:0002780!1.62e-52!41;UBERON:0001890!1.62e-52!41;UBERON:0006240!1.62e-52!41;UBERON:0002020!5.15e-51!34;UBERON:0003528!5.15e-51!34;UBERON:0003080!5.50e-51!42;UBERON:0001893!5.97e-51!34;UBERON:0002346!1.32e-49!90;UBERON:0002791!2.12e-49!33;UBERON:0001869!1.03e-47!32;UBERON:0007023!2.29e-39!115;UBERON:0003056!6.87e-37!61;UBERON:0004121!6.98e-37!169;UBERON:0000956!2.05e-36!25;UBERON:0000203!2.05e-36!25;UBERON:0000924!1.55e-35!173;UBERON:0006601!1.55e-35!173;UBERON:0000033!5.34e-34!123;UBERON:0000153!1.37e-31!129;UBERON:0007811!1.37e-31!129;UBERON:0002619!5.18e-31!22;UBERON:0001950!1.40e-27!20;UBERON:0003076!1.49e-17!15;UBERON:0003057!1.49e-17!15;UBERON:0002308!7.58e-16!9;UBERON:0000125!7.58e-16!9;UBERON:0000025!8.81e-14!194;UBERON:0000483!2.08e-13!309;UBERON:0004733!4.12e-13!12;UBERON:0002028!4.12e-13!12;UBERON:0007277!4.12e-13!12;UBERON:0000119!4.38e-13!312;UBERON:0000475!5.85e-13!365;UBERON:0009663!1.23e-12!7;UBERON:0002420!1.98e-12!9;UBERON:0007245!1.98e-12!9;UBERON:0010009!1.98e-12!9;UBERON:0010011!1.98e-12!9;UBERON:0000454!1.98e-12!9;UBERON:0004732!6.59e-12!13;UBERON:0000477!1.19e-11!286;UBERON:0000200!6.28e-11!6;UBERON:0004111!8.69e-11!241;UBERON:0002298!1.12e-10!8;UBERON:0000064!1.79e-10!219;UBERON:0001872!1.45e-09!5;UBERON:0002021!5.54e-09!5;UBERON:0002680!9.14e-09!9;UBERON:0001895!9.14e-09!9;UBERON:0010092!9.14e-09!9;UBERON:0000922!2.49e-08!612;UBERON:0001871!3.89e-08!7;UBERON:0000369!4.68e-08!4;UBERON:0002435!4.68e-08!4;UBERON:0000204!4.68e-08!4;UBERON:0010082!4.68e-08!4;UBERON:0000923!7.28e-08!604;UBERON:0005291!7.28e-08!604;UBERON:0006598!7.28e-08!604;UBERON:0002532!7.28e-08!604;UBERON:0002050!8.31e-08!605;UBERON:0005423!8.31e-08!605;UBERON:0000481!2.25e-07!347;UBERON:0000467!3.76e-07!625;UBERON:0000480!4.26e-07!626;UBERON:0000062!4.37e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.46e-79;34!UBERON:0003528;4.04e-79;34!UBERON:0002020;4.04e-79;34!UBERON:0001869;1.92e-78;32!UBERON:0002791;2.87e-78;32!UBERON:0000956;5.13e-66;25!UBERON:0000203;5.13e-66;25!UBERON:0002780;6.24e-66;41!UBERON:0001890;6.24e-66;41!UBERON:0000073;2.36e-59;53!UBERON:0002616;2.36e-59;53!UBERON:0002619;4.50e-56;22!UBERON:0001950;9.05e-50;20!UBERON:0000955;1.05e-39;68!UBERON:0001017;9.77e-39;75!UBERON:0001016;2.00e-31;83!UBERON:0000125;2.20e-27;9!UBERON:0002308;2.20e-27;9!UBERON:0009663;1.25e-21;7!UBERON:0002420;1.31e-21;9!UBERON:0007245;1.31e-21;9!UBERON:0010009;1.31e-21;9!UBERON:0010011;1.31e-21;9!UBERON:0000454;1.31e-21;9!UBERON:0002298;8.05e-19;6!UBERON:0000200;1.04e-18;6!UBERON:0001872;4.88e-16;5!UBERON:0004733;1.70e-15;12!UBERON:0002028;1.70e-15;12!UBERON:0002021;4.22e-15;5!UBERON:0004732;3.37e-14;13!UBERON:0000369;2.22e-13;4!UBERON:0002435;2.22e-13;4!UBERON:0000204;2.22e-13;4!UBERON:0011216;6.37e-12;132!UBERON:0007023;1.51e-11;114!UBERON:0001871;2.75e-11;6!UBERON:0000349;5.48e-11;5!UBERON:0001870;1.60e-10;3!UBERON:0005383;1.60e-10;3!UBERON:0005382;1.60e-10;3!UBERON:0000988;2.52e-10;3!UBERON:0001896;3.25e-10;3!UBERON:0005290;3.25e-10;3!UBERON:0002680;1.92e-08;9!UBERON:0001895;1.92e-08;9!UBERON:0001897;3.97e-08;2!UBERON:0010225;3.97e-08;2!UBERON:0001954;5.21e-08;2!UBERON:0003022;5.21e-08;2!UBERON:0002421;5.21e-08;2!UBERON:0002600;5.21e-08;2!UBERON:0010314;9.49e-08;132!UBERON:0001873;1.20e-07;2!UBERON:0002702;1.20e-07;2!UBERON:0002148;1.90e-07;2!UBERON:0006331;1.90e-07;2!UBERON:0009662;1.90e-07;2!UBERON:0001875;2.09e-07;2!UBERON:0006514;2.09e-07;2!UBERON:0002771;2.45e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.52e-110,56;UBERON:0005068,3.52e-110,56;UBERON:0006241,3.52e-110,56;UBERON:0007135,3.52e-110,56;UBERON:0000073,4.76e-106,53;UBERON:0002616,4.76e-106,53;UBERON:0001017,6.20e-103,81;UBERON:0003528,4.27e-93,34;UBERON:0002020,4.27e-93,34;UBERON:0001893,5.63e-93,34;UBERON:0002780,5.16e-92,41;UBERON:0001890,5.16e-92,41;UBERON:0003080,5.16e-92,41;UBERON:0006240,5.16e-92,41;UBERON:0001016,1.17e-91,89;UBERON:0000955,1.30e-91,68;UBERON:0006238,1.30e-91,68;UBERON:0001869,5.18e-87,32;UBERON:0002791,5.85e-87,32;UBERON:0003075,2.27e-75,82;UBERON:0007284,2.27e-75,82;UBERON:0002346,2.25e-71,86;UBERON:0000956,3.27e-66,25;UBERON:0000203,3.27e-66,25;UBERON:0003056,1.30e-62,61;UBERON:0010371,3.68e-57,104;UBERON:0002619,2.93e-56,22;UBERON:0001950,6.10e-50,20;UBERON:0010314,5.17e-47,132;UBERON:0004121,1.85e-44,171;UBERON:0000924,1.85e-44,171;UBERON:0006601,1.85e-44,171;UBERON:0007023,5.28e-37,114;UBERON:0011216,9.24e-33,223;UBERON:0000125,1.24e-27,9;UBERON:0002308,1.24e-27,9;UBERON:0000025,1.56e-24,192;UBERON:0002420,9.16e-22,9;UBERON:0007245,9.16e-22,9;UBERON:0010009,9.16e-22,9;UBERON:0010011,9.16e-22,9;UBERON:0000454,9.16e-22,9;UBERON:0009663,9.29e-22,7;UBERON:0003076,2.80e-19,15;UBERON:0003057,2.80e-19,15;UBERON:0002298,1.08e-18,6;UBERON:0000200,1.22e-18,6;UBERON:0004111,2.02e-17,240;UBERON:0001872,3.74e-16,5;UBERON:0004733,1.85e-15,12;UBERON:0002028,1.85e-15,12;UBERON:0007277,1.85e-15,12;UBERON:0002021,4.30e-15,5;UBERON:0000483,1.47e-14,306;UBERON:0000119,2.64e-14,309;UBERON:0004732,3.64e-14,13;UBERON:0000369,2.09e-13,4;UBERON:0002435,2.09e-13,4;UBERON:0000204,2.09e-13,4;UBERON:0010082,2.09e-13,4;UBERON:0001871,1.60e-11,6;UBERON:0000349,3.93e-11,5;UBERON:0005383,1.99e-10,3;UBERON:0005382,1.99e-10,3;UBERON:0001870,2.26e-10,3;UBERON:0000988,2.74e-10,3;UBERON:0001896,4.01e-10,3;UBERON:0005290,4.01e-10,3;UBERON:0010096,4.01e-10,3;UBERON:0002680,1.85e-08,9;UBERON:0001895,1.85e-08,9;UBERON:0010092,1.85e-08,9;UBERON:0000923,2.30e-08,560;UBERON:0010316,2.30e-08,560;UBERON:0005291,2.30e-08,560;UBERON:0006598,2.30e-08,560;UBERON:0010317,2.30e-08,560;UBERON:0002532,2.30e-08,560;UBERON:0002050,3.27e-08,564;UBERON:0001897,4.88e-08,2;UBERON:0010225,4.88e-08,2;UBERON:0001954,5.05e-08,2;UBERON:0003022,5.05e-08,2;UBERON:0002421,5.05e-08,2;UBERON:0002600,5.05e-08,2;UBERON:0002702,1.13e-07,2;UBERON:0005423,1.40e-07,581;UBERON:0001873,1.42e-07,2;UBERON:0002148,1.42e-07,2;UBERON:0006331,1.42e-07,2;UBERON:0009662,1.42e-07,2;UBERON:0010122,1.42e-07,2;UBERON:0001875,2.09e-07,2;UBERON:0006514,2.09e-07,2;UBERON:0002771,2.23e-07,2;UBERON:0000922,3.42e-07,592 | |||
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|short_description=p6@NPAS3 | |||
}} | }} |
Latest revision as of 18:08, 19 September 2015
Short description: | p6@NPAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NPAS3_5end |
Coexpression cluster: | C1030_Astrocyte_anaplastic_Neural_parietal_hippocampus_occipital_spinal |
Association with transcript: | -345bp_to_ENST00000551492, ENST00000551634_5end |
EntrezGene: | NPAS3 |
HGNC: | 19311 |
UniProt: | F8VR32F8VS42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.22e-11 | 3 |
neuronal stem cell | 4.10e-10 | 8 |
neural cell | 9.35e-07 | 25 |