FFCP PHASE1:Hg19::chr18:47376135..47376153,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:47376135..47376153,- to FFCP PHASE1:Hg19::chr18:47376135..47376153,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4645 | |EntrezGene=4645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7603 | |HGNC=7603 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=62bp_to_uc002ldz.2_5end | |||
|cluster_id=chr18:47376135..47376153,- | |||
|coexpression_cluster_id=C2462 | |||
|description=CAGE_peak_6_at_MYO5B_5end | |||
|id=chr18:47376135..47376153,- | |||
|ontology_enrichment_celltype=CL:0000066!1.44e-43!254;CL:0002076!2.36e-14!43;CL:0000223!4.65e-12!59;CL:0000082!2.32e-11!19;CL:0000220!5.73e-10!246;CL:0002321!1.06e-09!248;CL:0002368!1.51e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.17e-09;3!CL:0000188;5.39e-09;9!CL:0002327;7.23e-08;4!CL:0000082;3.74e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.39e-19,253;CL:0002621,1.92e-09,3;CL:0000188,6.11e-09,9;CL:0002327,4.02e-08,4;CL:0000082,4.08e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.24e-15;29 | |||
|ontology_enrichment_disease=DOID:305!1.08e-30!106;DOID:0050687!8.54e-24!143;DOID:162!2.54e-14!235;DOID:14566!6.67e-14!239;DOID:299!1.01e-09!25;DOID:1324!2.44e-08!15;DOID:0050615!1.36e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.44e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.87e-22,106;DOID:0050687,2.71e-15,143;DOID:162,1.36e-10,235;DOID:14566,3.50e-10,239;DOID:3493,2.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000065!4.22e-21!53;UBERON:0008947!6.59e-21!38;UBERON:0003258!6.59e-21!38;UBERON:0000072!3.25e-17!46;UBERON:0001007!8.51e-17!155;UBERON:0001555!8.51e-17!155;UBERON:0007026!8.51e-17!155;UBERON:0004119!1.07e-16!169;UBERON:0000925!1.07e-16!169;UBERON:0006595!1.07e-16!169;UBERON:0001004!4.17e-16!72;UBERON:0005153!4.07e-15!37;UBERON:0004921!6.10e-14!129;UBERON:0004185!6.10e-14!129;UBERON:0000063!1.94e-13!97;UBERON:0002048!8.30e-13!22;UBERON:0000117!8.30e-13!22;UBERON:0000171!8.30e-13!22;UBERON:0000170!8.30e-13!22;UBERON:0005597!8.30e-13!22;UBERON:0000118!8.30e-13!22;UBERON:0000481!1.14e-12!347;UBERON:0005911!1.55e-12!82;UBERON:0005157!3.83e-12!51;UBERON:0003104!7.28e-12!238;UBERON:0009142!7.28e-12!238;UBERON:0004802!2.32e-11!19;UBERON:0000115!2.32e-11!19;UBERON:0000077!1.11e-10!130;UBERON:0004807!1.57e-10!28;UBERON:0001041!2.35e-10!98;UBERON:0005178!3.77e-10!34;UBERON:0002224!3.77e-10!34;UBERON:0001737!6.64e-10!9;UBERON:0005181!1.17e-09!35;UBERON:0000064!1.61e-09!219;UBERON:0005177!3.29e-09!107;UBERON:0001048!1.74e-08!168;UBERON:0000467!4.87e-08!625;UBERON:0000480!5.93e-08!626;UBERON:0000923!6.22e-08!604;UBERON:0005291!6.22e-08!604;UBERON:0006598!6.22e-08!604;UBERON:0002532!6.22e-08!604;UBERON:0002050!7.57e-08!605;UBERON:0005423!7.57e-08!605;UBERON:0000922!1.35e-07!612;UBERON:0001557!1.59e-07!19;UBERON:0009569!1.63e-07!113;UBERON:0002100!2.34e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.64e-20;9!UBERON:0001557;1.64e-20;9!UBERON:0000072;1.53e-15;37!UBERON:0000065;3.78e-12;44!UBERON:0004807;4.04e-12;22!UBERON:0001949;1.17e-09;3!UBERON:0001911;7.23e-08;4!UBERON:0002394;1.32e-07;4!UBERON:0003928;1.32e-07;4!UBERON:0001004;1.83e-07;65!UBERON:0002294;1.93e-07;7!UBERON:0001173;1.93e-07;7!UBERON:0004802;3.74e-07;19!UBERON:0000115;3.74e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.61e-21,9;UBERON:0008947,6.54e-17,38;UBERON:0003258,6.54e-17,38;UBERON:0000072,6.23e-13,47;UBERON:0000065,9.09e-11,54;UBERON:0001004,3.38e-10,74;UBERON:0001949,1.92e-09,3;UBERON:0001041,2.93e-09,87;UBERON:0001557,3.71e-09,19;UBERON:0004807,5.41e-09,28;UBERON:0001007,8.99e-09,145;UBERON:0001555,8.99e-09,145;UBERON:0007026,8.99e-09,145;UBERON:0004921,3.40e-08,118;UBERON:0001911,4.02e-08,4;UBERON:0005333,4.02e-08,4;UBERON:0008425,4.02e-08,4;UBERON:0005311,4.02e-08,4;UBERON:0004119,2.20e-07,160;UBERON:0000925,2.20e-07,160;UBERON:0006595,2.20e-07,160;UBERON:0004802,4.08e-07,19;UBERON:0000115,4.08e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,1.83884244895785,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.221729397462564,0.175669571386252,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0.33472061276467,0,0,0,1.47065232138347,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.09098448236334,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,1.18306800039844,1.68584690078102,0.241011029883482,1.54411561825352,2.17879444092406,1.66089433377768,1.21348177344148,1.56977172100277,1.53898862778556,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,1.09750285408626,0,0.502644862058154,0.277765335475589,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,3.86358894857377,0.283550194484773,1.79117045405697,2.3250715081117,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.802025881213139,0.0920809889358963,0,0,0,0,0.770153371044148,0.784349769176855,0,0.316654886678627,0,0.340187410553031,0.215915916102139,0,0.812839312631559,0,1.01950509218015,0.831076008928724,1.79099803777743,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,0,4.06017016826912,0.770243085573222,1.22802939780904,3.03240459465967,0,0,0.681813019328807,4.89676196057055,0.661139661443912,0.576570202095319,0.382838137483752,0.2023155617111,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0.568272293612826,0.95497793895076,0,0.307160702099232,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0.102268682502155,0,0,1.25815691606258,1.79021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0.871507708151921,10.177933332338,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85295548414462,0.816164040795739,0,0,0,5.21899630569701,3.05515072466813,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,1.05226393590145,0.311064574191741,0,0,0,0,0.284609546029793,0.277349346026277,0.520679215005393,1.07791637155815,2.00236175134926,0,0,1.74161396320353,2.41194746384412,1.97077096927702,0,0,0.225980740780532,0.411125773940253,0,0,0.586654148204409,0.561111741760736,2.13452994739353,0.19980960958213,0.576361668616424,0,0,0.432164393964449,0.372757606696298,3.77110455386873,2.03856309110421,3.03348254305766,0,0,0.600420288709789,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0.137539436597234,0,0,0,0,0.335434687599266,0.236417121897595,0.157363764404994,2.11200673038813,0.717149357331379,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,1.36869470307464,0.704815022316672,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.429642228169954,0,0,6.40044423461046,0,0,0,0.192619830407303,1.50109113962448,0,0,0.463044948647668,0,1.25362188757041,2.16161013012681,0.877136198314828,0.706756583783524,0.192914038270915,0.168942440653073,0.76872455576384,0,0,0,0,0,0,0,0.491545817507439,2.11312123358627,0,0,0.172214979660816,0,0,0.979156554036111,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0.80057074828547,0,0.3062454773532,0,0,0,0,0,0,0,0,0.785181748008205,0,0,0.115525666150338,0,2.0710797781803,0,0,0.40341013740704,0,0,0.49131575253029,2.21784129325568,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0,0,0.171488009437418,0,0,0.472775363535873,0.111231401892069,0.078493092850514,0,0.280272163313789,0,1.29556554731173,1.9110067515482,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,1.3746412112643,0.31020638566432,0.955538938977433,0,2.0611549059201,1.34109717480496,0,0.102662806856247,0,0,0.701818390386317,0,0,1.01651473835064,0,8.60488208330039,7.33154502025474,0.218559560503957,1.41095188908457,0,1.17838273550813,0,0,0,0,0,0,0,0.71421575442263,0,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.64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| ||
|short_description=p6@MYO5B | |||
}} | }} |
Latest revision as of 18:03, 19 September 2015
Short description: | p6@MYO5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MYO5B_5end |
Coexpression cluster: | C2462_cervical_small_colon_clear_embryonic_renal_mucinous |
Association with transcript: | 62bp_to_uc002ldz.2_5end |
EntrezGene: | MYO5B |
HGNC: | 7603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.39e-19 | 253 |
gingival epithelial cell | 1.92e-09 | 3 |
cell of skeletal muscle | 6.11e-09 | 9 |
mammary gland epithelial cell | 4.02e-08 | 4 |
epithelial cell of lung | 4.08e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.61e-21 | 9 |
respiratory primordium | 6.54e-17 | 38 |
endoderm of foregut | 6.54e-17 | 38 |
segment of respiratory tract | 6.23e-13 | 47 |
respiratory tract | 9.09e-11 | 54 |
respiratory system | 3.38e-10 | 74 |
gingival epithelium | 1.92e-09 | 3 |
foregut | 2.93e-09 | 87 |
upper respiratory tract | 3.71e-09 | 19 |
respiratory system epithelium | 5.41e-09 | 28 |
digestive system | 8.99e-09 | 145 |
digestive tract | 8.99e-09 | 145 |
primitive gut | 8.99e-09 | 145 |
subdivision of digestive tract | 3.40e-08 | 118 |
mammary gland | 4.02e-08 | 4 |
mammary bud | 4.02e-08 | 4 |
mammary ridge | 4.02e-08 | 4 |
mammary placode | 4.02e-08 | 4 |
endoderm-derived structure | 2.20e-07 | 160 |
endoderm | 2.20e-07 | 160 |
presumptive endoderm | 2.20e-07 | 160 |
respiratory tract epithelium | 4.08e-07 | 19 |
lung epithelium | 4.08e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.87e-22 | 106 |
cell type cancer | 2.71e-15 | 143 |
cancer | 1.36e-10 | 235 |
disease of cellular proliferation | 3.50e-10 | 239 |
signet ring cell adenocarcinoma | 2.96e-07 | 2 |