FFCP PHASE1:Hg19::chr10:85954449..85954467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92211 | |EntrezGene=92211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14550 | |HGNC=14550 | ||
|TSSclassifier=strong | |||
|UniProt=F1T0L2,Q96JP9 | |UniProt=F1T0L2,Q96JP9 | ||
|association_with_transcript=35bp_to_ENST00000372117_5end | |association_with_transcript=35bp_to_ENST00000372117_5end | ||
|cluster_id=chr10:85954449..85954467,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_5_at_CDHR1_5end | |description=CAGE_peak_5_at_CDHR1_5end | ||
|id=chr10:85954449..85954467,+ | |id=chr10:85954449..85954467,+ | ||
|ontology_enrichment_celltype=CL:1000507!3.16e-09!12;CL:1000494!3.16e-09!12 | |ontology_enrichment_celltype=CL:1000507!3.16e-09!12;CL:1000494!3.16e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000650;5.47e-23;2!CL:1000500;5.47e-23;2!CL:1000618;5.47e-23;2!CL:1001318;5.47e-23;2!CL:0002173;5.47e-23;2!CL:0000669;5.39e-12;4!CL:1000746;3.14e-07;7!CL:1000612;3.14e-07;7!CL:0001014;9.53e-07;2!CL:0001016;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.55e-23,2;CL:1000500,8.55e-23,2;CL:1000618,8.55e-23,2;CL:1001318,8.55e-23,2;CL:0002173,8.55e-23,2;CL:0000669,6.73e-12,4;CL:1000746,3.56e-07,7;CL:1000612,3.56e-07,7;CL:0001014,9.02e-07,2;CL:0001016,9.02e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.83e-16;3!UBERON:0006238;1.32e-09;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.57e-22!86;UBERON:0001017!4.79e-21!82;UBERON:0000073!1.23e-20!94;UBERON:0001016!1.23e-20!94;UBERON:0000153!1.29e-20!129;UBERON:0007811!1.29e-20!129;UBERON:0001049!2.15e-20!57;UBERON:0005068!2.15e-20!57;UBERON:0006241!2.15e-20!57;UBERON:0007135!2.15e-20!57;UBERON:0003075!6.11e-20!86;UBERON:0007284!6.11e-20!86;UBERON:0000955!1.80e-19!69;UBERON:0006238!1.80e-19!69;UBERON:0000033!4.69e-19!123;UBERON:0002346!1.47e-18!90;UBERON:0002616!4.61e-18!59;UBERON:0003056!7.21e-16!61;UBERON:0004121!1.14e-15!169;UBERON:0000924!5.63e-15!173;UBERON:0006601!5.63e-15!173;UBERON:0007023!2.37e-14!115;UBERON:0002780!3.48e-14!41;UBERON:0001890!3.48e-14!41;UBERON:0006240!3.48e-14!41;UBERON:0003080!1.04e-13!42;UBERON:0002020!4.68e-13!34;UBERON:0003528!4.68e-13!34;UBERON:0001893!1.02e-12!34;UBERON:0001869!2.92e-12!32;UBERON:0002791!7.76e-12!33;UBERON:0000064!2.86e-11!219;UBERON:0000483!1.65e-10!309;UBERON:0000119!3.06e-10!312;UBERON:0000475!5.26e-10!365;UBERON:0009773!3.16e-09!12;UBERON:0001231!3.16e-09!12;UBERON:0004810!3.16e-09!12;UBERON:0000481!8.64e-09!347;UBERON:0003887!2.92e-08!21;UBERON:0000956!3.33e-08!25;UBERON:0000203!3.33e-08!25;UBERON:0002619!3.97e-08!22;UBERON:0003076!3.99e-08!15;UBERON:0003057!3.99e-08!15;UBERON:0002298!6.52e-08!8;UBERON:0000477!7.23e-08!286;UBERON:0000025!9.09e-08!194;UBERON:0001950!1.28e-07!20;UBERON:0006555!2.02e-07!17;UBERON:0005103!2.02e-07!17;UBERON:0000083!2.02e-07!17;UBERON:0009201!2.02e-07!17;UBERON:0004819!2.02e-07!17;UBERON:0006553!2.02e-07!17;UBERON:0003074!2.02e-07!17;UBERON:0003060!2.02e-07!17;UBERON:0000080!6.71e-07!18;UBERON:0002120!6.71e-07!18;UBERON:0004875!6.71e-07!18;UBERON:0005721!6.71e-07!18;UBERON:0005754!6.71e-07!18;UBERON:0007297!6.71e-07!18;UBERON:0002308!8.80e-07!9;UBERON:0000125!8.80e-07!9 | |ontology_enrichment_uberon=UBERON:0005743!1.57e-22!86;UBERON:0001017!4.79e-21!82;UBERON:0000073!1.23e-20!94;UBERON:0001016!1.23e-20!94;UBERON:0000153!1.29e-20!129;UBERON:0007811!1.29e-20!129;UBERON:0001049!2.15e-20!57;UBERON:0005068!2.15e-20!57;UBERON:0006241!2.15e-20!57;UBERON:0007135!2.15e-20!57;UBERON:0003075!6.11e-20!86;UBERON:0007284!6.11e-20!86;UBERON:0000955!1.80e-19!69;UBERON:0006238!1.80e-19!69;UBERON:0000033!4.69e-19!123;UBERON:0002346!1.47e-18!90;UBERON:0002616!4.61e-18!59;UBERON:0003056!7.21e-16!61;UBERON:0004121!1.14e-15!169;UBERON:0000924!5.63e-15!173;UBERON:0006601!5.63e-15!173;UBERON:0007023!2.37e-14!115;UBERON:0002780!3.48e-14!41;UBERON:0001890!3.48e-14!41;UBERON:0006240!3.48e-14!41;UBERON:0003080!1.04e-13!42;UBERON:0002020!4.68e-13!34;UBERON:0003528!4.68e-13!34;UBERON:0001893!1.02e-12!34;UBERON:0001869!2.92e-12!32;UBERON:0002791!7.76e-12!33;UBERON:0000064!2.86e-11!219;UBERON:0000483!1.65e-10!309;UBERON:0000119!3.06e-10!312;UBERON:0000475!5.26e-10!365;UBERON:0009773!3.16e-09!12;UBERON:0001231!3.16e-09!12;UBERON:0004810!3.16e-09!12;UBERON:0000481!8.64e-09!347;UBERON:0003887!2.92e-08!21;UBERON:0000956!3.33e-08!25;UBERON:0000203!3.33e-08!25;UBERON:0002619!3.97e-08!22;UBERON:0003076!3.99e-08!15;UBERON:0003057!3.99e-08!15;UBERON:0002298!6.52e-08!8;UBERON:0000477!7.23e-08!286;UBERON:0000025!9.09e-08!194;UBERON:0001950!1.28e-07!20;UBERON:0006555!2.02e-07!17;UBERON:0005103!2.02e-07!17;UBERON:0000083!2.02e-07!17;UBERON:0009201!2.02e-07!17;UBERON:0004819!2.02e-07!17;UBERON:0006553!2.02e-07!17;UBERON:0003074!2.02e-07!17;UBERON:0003060!2.02e-07!17;UBERON:0000080!6.71e-07!18;UBERON:0002120!6.71e-07!18;UBERON:0004875!6.71e-07!18;UBERON:0005721!6.71e-07!18;UBERON:0005754!6.71e-07!18;UBERON:0007297!6.71e-07!18;UBERON:0002308!8.80e-07!9;UBERON:0000125!8.80e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.98e-24;2!UBERON:0002757;8.98e-24;2!UBERON:0010134;8.98e-24;2!UBERON:0005408;8.98e-24;2!UBERON:0001899;8.98e-24;2!UBERON:0003567;5.47e-23;2!UBERON:0003838;5.47e-23;2!UBERON:0003586;5.47e-23;2!UBERON:0005169;5.47e-23;2!UBERON:0002321;5.47e-23;2!UBERON:0005215;5.47e-23;2!UBERON:0002303;5.47e-23;2!UBERON:0002319;5.47e-23;2!UBERON:0003296;2.20e-12;4!UBERON:0010133;2.20e-12;4!UBERON:0002784;2.20e-12;4!UBERON:0003891;5.39e-12;4!UBERON:0000966;7.11e-10;5!UBERON:0005388;7.11e-10;5!UBERON:0001802;7.11e-10;5!UBERON:0001894;1.90e-07;7!UBERON:0000074;3.14e-07;7!UBERON:0001229;3.14e-07;7!UBERON:0001875;6.80e-07;2!UBERON:0006514;6.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.98e-24,2;UBERON:0002757,8.98e-24,2;UBERON:0010134,8.98e-24,2;UBERON:0005408,8.98e-24,2;UBERON:0001899,8.98e-24,2;UBERON:0003567,8.55e-23,2;UBERON:0003838,8.55e-23,2;UBERON:0003586,8.55e-23,2;UBERON:0005169,8.55e-23,2;UBERON:0002321,8.55e-23,2;UBERON:0005215,8.55e-23,2;UBERON:0002303,8.55e-23,2;UBERON:0002319,8.55e-23,2;UBERON:0003296,2.20e-12,4;UBERON:0010133,2.20e-12,4;UBERON:0002784,2.20e-12,4;UBERON:0003891,6.73e-12,4;UBERON:0000966,2.09e-08,6;UBERON:0005388,2.09e-08,6;UBERON:0001802,2.09e-08,6;UBERON:0001894,1.90e-07,7;UBERON:0006222,1.90e-07,7;UBERON:0010532,3.56e-07,7;UBERON:0000074,3.56e-07,7;UBERON:0001229,3.56e-07,7;UBERON:0001230,3.56e-07,7;UBERON:0003220,3.56e-07,7;UBERON:0005749,3.56e-07,7;UBERON:0004199,3.56e-07,7;UBERON:0004209,3.56e-07,7;UBERON:0004198,3.56e-07,7;UBERON:0000955,3.74e-07,68;UBERON:0006238,3.74e-07,68;UBERON:0001875,7.20e-07,2;UBERON:0006514,7.20e-07,2 | |||
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| ||
|short_description=p5@CDHR1 | |short_description=p5@CDHR1 | ||
}} | }} |
Latest revision as of 16:46, 19 September 2015
Short description: | p5@CDHR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDHR1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 35bp_to_ENST00000372117_5end |
EntrezGene: | CDHR1 |
HGNC: | 14550 |
UniProt: | F1T0L2Q96JP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.55e-23 | 2 |
kidney interstitial cell | 8.55e-23 | 2 |
juxtaglomerular complex cell | 8.55e-23 | 2 |
renal interstitial pericyte | 8.55e-23 | 2 |
extraglomerular mesangial cell | 8.55e-23 | 2 |
pericyte cell | 6.73e-12 | 4 |
glomerular cell | 3.56e-07 | 7 |
kidney corpuscule cell | 3.56e-07 | 7 |
CD1a-positive Langerhans cell | 9.02e-07 | 2 |
immature CD1a-positive Langerhans cell | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.98e-24 | 2 |
regional part of epithalamus | 8.98e-24 | 2 |
secretory circumventricular organ | 8.98e-24 | 2 |
circumventricular organ | 8.98e-24 | 2 |
epithalamus | 8.98e-24 | 2 |
abdomen connective tissue | 8.55e-23 | 2 |
abdominal segment connective tissue | 8.55e-23 | 2 |
trunk connective tissue | 8.55e-23 | 2 |
interstitial tissue | 8.55e-23 | 2 |
extraglomerular mesangium | 8.55e-23 | 2 |
kidney interstitium | 8.55e-23 | 2 |
juxtaglomerular apparatus | 8.55e-23 | 2 |
mesangium | 8.55e-23 | 2 |
gland of diencephalon | 2.20e-12 | 4 |
neuroendocrine gland | 2.20e-12 | 4 |
regional part of diencephalon | 2.20e-12 | 4 |
stroma | 6.73e-12 | 4 |
retina | 2.09e-08 | 6 |
photoreceptor array | 2.09e-08 | 6 |
posterior segment of eyeball | 2.09e-08 | 6 |
diencephalon | 1.90e-07 | 7 |
future diencephalon | 1.90e-07 | 7 |
primitive nephron | 3.56e-07 | 7 |
renal glomerulus | 3.56e-07 | 7 |
renal corpuscle | 3.56e-07 | 7 |
glomerular capsule | 3.56e-07 | 7 |
metanephric mesenchyme | 3.56e-07 | 7 |
glomerular tuft | 3.56e-07 | 7 |
S-shaped body | 3.56e-07 | 7 |
renal vesicle | 3.56e-07 | 7 |
comma-shaped body | 3.56e-07 | 7 |
brain | 3.74e-07 | 68 |
future brain | 3.74e-07 | 68 |
globus pallidus | 7.20e-07 | 2 |
pallidum | 7.20e-07 | 2 |