FFCP PHASE1:Hg19::chr1:200864020..200864063,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55765 | |EntrezGene=55765 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25599 | |HGNC=25599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_uc010ppm.1_5end | |association_with_transcript=21bp_to_uc010ppm.1_5end | ||
|cluster_id=chr1:200864020..200864063,+ | |||
|coexpression_cluster_id=C226 | |coexpression_cluster_id=C226 | ||
|description=CAGE_peak_1_at_C1orf106_5end | |description=CAGE_peak_1_at_C1orf106_5end | ||
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|ontology_enrichment_celltype=CL:0000066!2.01e-30!254;CL:0002076!1.84e-28!43;CL:0000223!4.58e-27!59;CL:0002251!5.97e-14!21;CL:0002368!1.14e-12!13;CL:0002202!1.15e-08!9;CL:0002632!1.15e-08!9;CL:0002159!4.49e-08!13;CL:1000497!6.16e-08!18;CL:0002518!6.16e-08!18;CL:1000449!8.59e-07!16 | |ontology_enrichment_celltype=CL:0000066!2.01e-30!254;CL:0002076!1.84e-28!43;CL:0000223!4.58e-27!59;CL:0002251!5.97e-14!21;CL:0002368!1.14e-12!13;CL:0002202!1.15e-08!9;CL:0002632!1.15e-08!9;CL:0002159!4.49e-08!13;CL:1000497!6.16e-08!18;CL:0002518!6.16e-08!18;CL:1000449!8.59e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.81e-23;42!CL:0002368;8.33e-15;13!CL:0002251;2.06e-14;20!CL:1000497;3.08e-10;17!CL:0002518;3.08e-10;17!CL:0002202;4.59e-10;9!CL:0002632;4.59e-10;9!CL:1000507;6.11e-10;10!CL:1000494;6.11e-10;10!CL:1000449;7.58e-09;15!CL:0002159;1.21e-08;14!CL:0000244;4.83e-07;4!CL:0000731;4.83e-07;4 | |ontology_enrichment_celltype_v019=CL:0002076;2.81e-23;42!CL:0002368;8.33e-15;13!CL:0002251;2.06e-14;20!CL:1000497;3.08e-10;17!CL:0002518;3.08e-10;17!CL:0002202;4.59e-10;9!CL:0002632;4.59e-10;9!CL:1000507;6.11e-10;10!CL:1000494;6.11e-10;10!CL:1000449;7.58e-09;15!CL:0002159;1.21e-08;14!CL:0000244;4.83e-07;4!CL:0000731;4.83e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.60e-32,253;CL:0002076,2.95e-30,42;CL:0000223,1.95e-28,58;CL:0002368,8.39e-15,13;CL:0002251,2.10e-14,20;CL:1000497,3.08e-10,17;CL:0002518,3.08e-10,17;CL:0002202,4.54e-10,9;CL:0002632,4.54e-10,9;CL:1000507,6.11e-10,10;CL:1000494,6.11e-10,10;CL:1000449,7.68e-09,15;CL:0002159,1.21e-08,14;CL:0000244,4.90e-07,4;CL:0000731,4.90e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;1.33e-14;58!UBERON:0006595;1.41e-07;86 | |ontology_enrichment_development_v019=CL:0000223;1.33e-14;58!UBERON:0006595;1.41e-07;86 | ||
|ontology_enrichment_disease=DOID:305!6.06e-16!106;DOID:1749!4.08e-13!14;DOID:299!7.85e-11!25;DOID:0050687!8.61e-10!143 | |ontology_enrichment_disease=DOID:305!6.06e-16!106;DOID:1749!4.08e-13!14;DOID:299!7.85e-11!25;DOID:0050687!8.61e-10!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.96e-15;14!DOID:299;1.68e-09;25 | |ontology_enrichment_disease_v019=DOID:1749;2.96e-15;14!DOID:299;1.68e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,3.24e-15,14;DOID:305,5.69e-15,106;DOID:0050687,7.63e-10,143;DOID:299,1.65e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.02e-29!169;UBERON:0000925!1.02e-29!169;UBERON:0006595!1.02e-29!169;UBERON:0001007!3.72e-23!155;UBERON:0001555!3.72e-23!155;UBERON:0007026!3.72e-23!155;UBERON:0004921!5.23e-21!129;UBERON:0004185!5.23e-21!129;UBERON:0000077!5.29e-18!130;UBERON:0001008!3.36e-16!45;UBERON:0000466!3.61e-16!126;UBERON:0006554!1.53e-15!44;UBERON:0005177!6.58e-15!107;UBERON:0000464!8.40e-15!104;UBERON:0005911!2.18e-13!82;UBERON:0001004!1.59e-12!72;UBERON:0000161!1.61e-12!35;UBERON:0001041!7.67e-12!98;UBERON:0000062!4.22e-11!511;UBERON:0003104!2.04e-10!238;UBERON:0009142!2.04e-10!238;UBERON:0003064!2.66e-10!37;UBERON:0000489!5.16e-10!32;UBERON:0009569!1.31e-09!113;UBERON:0000058!1.66e-09!26;UBERON:0000166!2.19e-09!21;UBERON:0002113!2.32e-09!27;UBERON:0003918!2.32e-09!27;UBERON:0005095!2.32e-09!27;UBERON:0007687!2.32e-09!27;UBERON:0000481!8.12e-09!347;UBERON:0000344!1.97e-08!12;UBERON:0000065!2.45e-08!53;UBERON:0002553!3.75e-08!70;UBERON:0005178!5.64e-08!34;UBERON:0002224!5.64e-08!34;UBERON:0005409!5.85e-08!35;UBERON:0005172!6.08e-08!55;UBERON:0005173!6.08e-08!55;UBERON:0005153!6.26e-08!37;UBERON:0000080!8.75e-08!18;UBERON:0002120!8.75e-08!18;UBERON:0004875!8.75e-08!18;UBERON:0005721!8.75e-08!18;UBERON:0005754!8.75e-08!18;UBERON:0007297!8.75e-08!18;UBERON:0004876!1.00e-07!20;UBERON:0000922!1.06e-07!612;UBERON:0005181!1.40e-07!35;UBERON:0007196!2.49e-07!14;UBERON:0001558!2.49e-07!14;UBERON:0006555!2.61e-07!17;UBERON:0005103!2.61e-07!17;UBERON:0000083!2.61e-07!17;UBERON:0009201!2.61e-07!17;UBERON:0004819!2.61e-07!17;UBERON:0006553!2.61e-07!17;UBERON:0003074!2.61e-07!17;UBERON:0003060!2.61e-07!17;UBERON:0000160!3.43e-07!27;UBERON:0000365!4.40e-07!5;UBERON:0000468!4.54e-07!659;UBERON:0000467!5.23e-07!625;UBERON:0000165!5.65e-07!28;UBERON:0000930!5.65e-07!28;UBERON:0001046!6.22e-07!19;UBERON:0000480!6.25e-07!626;UBERON:0004211!8.59e-07!16;UBERON:0001285!8.59e-07!16;UBERON:0007684!8.59e-07!16;UBERON:0003220!8.59e-07!16;UBERON:0004208!8.59e-07!16 | |ontology_enrichment_uberon=UBERON:0004119!1.02e-29!169;UBERON:0000925!1.02e-29!169;UBERON:0006595!1.02e-29!169;UBERON:0001007!3.72e-23!155;UBERON:0001555!3.72e-23!155;UBERON:0007026!3.72e-23!155;UBERON:0004921!5.23e-21!129;UBERON:0004185!5.23e-21!129;UBERON:0000077!5.29e-18!130;UBERON:0001008!3.36e-16!45;UBERON:0000466!3.61e-16!126;UBERON:0006554!1.53e-15!44;UBERON:0005177!6.58e-15!107;UBERON:0000464!8.40e-15!104;UBERON:0005911!2.18e-13!82;UBERON:0001004!1.59e-12!72;UBERON:0000161!1.61e-12!35;UBERON:0001041!7.67e-12!98;UBERON:0000062!4.22e-11!511;UBERON:0003104!2.04e-10!238;UBERON:0009142!2.04e-10!238;UBERON:0003064!2.66e-10!37;UBERON:0000489!5.16e-10!32;UBERON:0009569!1.31e-09!113;UBERON:0000058!1.66e-09!26;UBERON:0000166!2.19e-09!21;UBERON:0002113!2.32e-09!27;UBERON:0003918!2.32e-09!27;UBERON:0005095!2.32e-09!27;UBERON:0007687!2.32e-09!27;UBERON:0000481!8.12e-09!347;UBERON:0000344!1.97e-08!12;UBERON:0000065!2.45e-08!53;UBERON:0002553!3.75e-08!70;UBERON:0005178!5.64e-08!34;UBERON:0002224!5.64e-08!34;UBERON:0005409!5.85e-08!35;UBERON:0005172!6.08e-08!55;UBERON:0005173!6.08e-08!55;UBERON:0005153!6.26e-08!37;UBERON:0000080!8.75e-08!18;UBERON:0002120!8.75e-08!18;UBERON:0004875!8.75e-08!18;UBERON:0005721!8.75e-08!18;UBERON:0005754!8.75e-08!18;UBERON:0007297!8.75e-08!18;UBERON:0004876!1.00e-07!20;UBERON:0000922!1.06e-07!612;UBERON:0005181!1.40e-07!35;UBERON:0007196!2.49e-07!14;UBERON:0001558!2.49e-07!14;UBERON:0006555!2.61e-07!17;UBERON:0005103!2.61e-07!17;UBERON:0000083!2.61e-07!17;UBERON:0009201!2.61e-07!17;UBERON:0004819!2.61e-07!17;UBERON:0006553!2.61e-07!17;UBERON:0003074!2.61e-07!17;UBERON:0003060!2.61e-07!17;UBERON:0000160!3.43e-07!27;UBERON:0000365!4.40e-07!5;UBERON:0000468!4.54e-07!659;UBERON:0000467!5.23e-07!625;UBERON:0000165!5.65e-07!28;UBERON:0000930!5.65e-07!28;UBERON:0001046!6.22e-07!19;UBERON:0000480!6.25e-07!626;UBERON:0004211!8.59e-07!16;UBERON:0001285!8.59e-07!16;UBERON:0007684!8.59e-07!16;UBERON:0003220!8.59e-07!16;UBERON:0004208!8.59e-07!16 | ||
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| ||
|short_description=p1@C1orf106 | |short_description=p1@C1orf106 | ||
}} | }} |
Latest revision as of 16:43, 19 September 2015
Short description: | p1@C1orf106 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf106_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 21bp_to_uc010ppm.1_5end |
EntrezGene: | C1orf106 |
HGNC: | 25599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.60e-32 | 253 |
endo-epithelial cell | 2.95e-30 | 42 |
endodermal cell | 1.95e-28 | 58 |
respiratory epithelial cell | 8.39e-15 | 13 |
epithelial cell of alimentary canal | 2.10e-14 | 20 |
kidney cell | 3.08e-10 | 17 |
kidney epithelial cell | 3.08e-10 | 17 |
epithelial cell of tracheobronchial tree | 4.54e-10 | 9 |
epithelial cell of lower respiratory tract | 4.54e-10 | 9 |
kidney tubule cell | 6.11e-10 | 10 |
nephron tubule epithelial cell | 6.11e-10 | 10 |
epithelial cell of nephron | 7.68e-09 | 15 |
general ecto-epithelial cell | 1.21e-08 | 14 |
transitional epithelial cell | 4.90e-07 | 4 |
urothelial cell | 4.90e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.24e-15 | 14 |
carcinoma | 5.69e-15 | 106 |
cell type cancer | 7.63e-10 | 143 |
adenocarcinoma | 1.65e-09 | 25 |