FFCP PHASE2:Hg19::chr7:80141328..80141339,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:346562 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:22800 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=346562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=22800 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A8MTJ3 | ||
|association_with_transcript=0bp_to_ENST00000398291_5end | |association_with_transcript=0bp_to_ENST00000398291_5end | ||
|cluster_id=chr7:80141328..80141339,- | |cluster_id=chr7:80141328..80141339,- |
Latest revision as of 16:42, 19 September 2015
Short description: | p2@GNAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNAT3_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | 0bp_to_ENST00000398291_5end |
EntrezGene: | GNAT3 |
HGNC: | 22800 |
UniProt: | A8MTJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@GNAT3 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.48e-18 | 2 |
epithelial cell of large intestine | 7.67e-18 | 2 |
intestinal epithelial cell | 1.32e-09 | 4 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.84e-34 | 1 |
paranasal sinus | 1.84e-34 | 1 |
uterine epithelium | 6.48e-18 | 2 |
cervix epithelium | 6.48e-18 | 2 |
intestine | 3.69e-17 | 17 |
colon | 1.31e-15 | 9 |
large intestine | 5.76e-13 | 11 |
gastrointestinal system | 3.93e-12 | 25 |
rectum | 1.32e-09 | 4 |
intestinal mucosa | 1.32e-09 | 4 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.84e-34 | 1 |
maxillary sinus cancer | 1.84e-34 | 1 |
lung small cell carcinoma | 1.44e-09 | 4 |
respiratory system cancer | 2.66e-09 | 16 |
cervical cancer | 5.73e-08 | 5 |
Showing 1 to 5 of 5 entries