FFCP PHASE1:Hg19::chr3:73483144..73483147,-: Difference between revisions
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|id=chr3:73483144..73483147,-
|short_description=p4@PDZRN3
|description=CAGE_peak_4_at_PDZRN3_5end
|association_with_transcript=-89bp_to_ENST00000479530_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23024 | |EntrezGene=23024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17704 | |HGNC=17704 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZAG0 | |UniProt=B7ZAG0 | ||
|association_with_transcript=-89bp_to_ENST00000479530_5end | |||
|cluster_id=chr3:73483144..73483147,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_4_at_PDZRN3_5end | |||
|id=chr3:73483144..73483147,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;5.25e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.84e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.27e-22!115;UBERON:0002619!2.63e-18!22;UBERON:0002020!2.78e-18!34;UBERON:0003528!2.78e-18!34;UBERON:0001893!5.14e-18!34;UBERON:0001950!6.84e-18!20;UBERON:0001869!1.09e-17!32;UBERON:0002791!5.50e-17!33;UBERON:0000073!2.75e-16!94;UBERON:0001016!2.75e-16!94;UBERON:0000956!1.24e-15!25;UBERON:0000203!1.24e-15!25;UBERON:0005743!1.51e-15!86;UBERON:0001049!1.87e-15!57;UBERON:0005068!1.87e-15!57;UBERON:0006241!1.87e-15!57;UBERON:0007135!1.87e-15!57;UBERON:0001017!2.10e-14!82;UBERON:0002780!5.64e-14!41;UBERON:0001890!5.64e-14!41;UBERON:0006240!5.64e-14!41;UBERON:0001871!6.60e-14!7;UBERON:0003080!1.65e-13!42;UBERON:0002616!2.57e-13!59;UBERON:0000955!2.75e-13!69;UBERON:0006238!2.75e-13!69;UBERON:0002346!1.39e-12!90;UBERON:0003075!1.58e-12!86;UBERON:0007284!1.58e-12!86;UBERON:0003056!7.09e-12!61;UBERON:0000153!6.48e-10!129;UBERON:0007811!6.48e-10!129;UBERON:0000924!2.71e-09!173;UBERON:0006601!2.71e-09!173;UBERON:0004121!4.08e-09!169;UBERON:0000059!5.57e-08!11;UBERON:0000033!5.80e-08!123;UBERON:0000064!1.34e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.09e-18;17!UBERON:0005409;7.80e-14;22!UBERON:0000922;3.67e-13;49!UBERON:0000059;6.68e-12;11!UBERON:0002108;1.21e-10;4!UBERON:0002114;2.03e-08;2!UBERON:0004921;3.17e-08;33!UBERON:0001871;9.79e-08;6!UBERON:0007029;4.58e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.24e-18,17;UBERON:0005409,3.78e-12,25;UBERON:0000059,5.81e-12,11;UBERON:0002108,1.14e-10,4;UBERON:0002114,1.99e-08,2;UBERON:0001871,9.90e-08,6;UBERON:0007029,4.58e-07,1 | |||
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| ||
|short_description=p4@PDZRN3 | |||
}} | }} |
Latest revision as of 15:21, 19 September 2015
Short description: | p4@PDZRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDZRN3_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -89bp_to_ENST00000479530_5end |
EntrezGene: | PDZRN3 |
HGNC: | 17704 |
UniProt: | B7ZAG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.24e-18 | 17 |
gastrointestinal system | 3.78e-12 | 25 |
large intestine | 5.81e-12 | 11 |
small intestine | 1.14e-10 | 4 |
duodenum | 1.99e-08 | 2 |
temporal lobe | 9.90e-08 | 6 |
surface | 4.58e-07 | 1 |