FFCP PHASE1:Hg19::chr3:112359959..112359972,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:112359959..112359972,- to FFCP PHASE1:Hg19::chr3:112359959..112359972,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt=Q76M96 | |UniProt=Q76M96 | ||
|association_with_transcript=4bp_to_NM_199511,NM_199512,uc003dzf.2,uc003dzg.2,uc003dzh.1_5end | |||
|cluster_id=chr3:112359959..112359972,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_3_at_CCDC80_5end | |||
|id=chr3:112359959..112359972,- | |||
|ontology_enrichment_celltype=CL:0000055!6.86e-33!180;CL:0000057!3.71e-18!75;CL:0000680!2.78e-17!57;CL:0000056!2.78e-17!57;CL:0000355!2.78e-17!57;CL:0000187!6.41e-16!54;CL:0000183!7.23e-14!59;CL:0000393!1.58e-12!60;CL:0000211!1.58e-12!60;CL:0000192!2.24e-12!42;CL:0000514!2.24e-12!42;CL:0000359!2.91e-10!32;CL:0000222!1.08e-09!119;CL:0002620!7.64e-09!23;CL:0000136!2.65e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.93e-10;32!CL:0000192;8.30e-10;43!CL:0000187;1.18e-09;55!CL:0002620;3.76e-09;23!CL:0000134;7.46e-08;55!CL:0000057;1.07e-07;73!CL:0000349;2.97e-07;19!CL:0000393;3.90e-07;61!CL:0000211;3.90e-07;61!CL:0002320;4.30e-07;188!CL:0002494;6.43e-07;16!CL:0000723;6.49e-07;61!CL:0000048;7.92e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.88e-19,76;CL:0000680,2.01e-18,58;CL:0000056,2.01e-18,58;CL:0000355,2.01e-18,58;CL:0000187,5.33e-17,55;CL:0000192,2.65e-13,43;CL:0000514,2.65e-13,43;CL:0000393,9.28e-13,61;CL:0000211,9.28e-13,61;CL:0000359,1.30e-10,32;CL:0002620,3.91e-09,23;CL:0000222,1.83e-08,121;CL:0000136,1.56e-07,15;CL:0000349,2.98e-07,19;CL:0002494,6.23e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;4.98e-10;58!CL:0000514;8.30e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.81e-20!83;UBERON:0002329!5.81e-20!83;UBERON:0003077!5.81e-20!83;UBERON:0003059!5.81e-20!83;UBERON:0007282!5.81e-20!83;UBERON:0009618!5.81e-20!83;UBERON:0007285!5.81e-20!83;UBERON:0004290!9.32e-18!70;UBERON:0000486!2.19e-17!82;UBERON:0002385!2.86e-17!63;UBERON:0001015!2.86e-17!63;UBERON:0000383!2.86e-17!63;UBERON:0001134!3.82e-17!61;UBERON:0002036!3.82e-17!61;UBERON:0003082!3.82e-17!61;UBERON:0005256!3.16e-14!143;UBERON:0000475!3.51e-14!365;UBERON:0000481!4.06e-12!347;UBERON:0004872!4.21e-12!84;UBERON:0003102!5.94e-11!95;UBERON:0000468!6.43e-11!659;UBERON:0004923!7.16e-11!57;UBERON:0002100!1.10e-10!216;UBERON:0003104!8.61e-10!238;UBERON:0009142!8.61e-10!238;UBERON:0000490!1.18e-09!138;UBERON:0000119!1.74e-09!312;UBERON:0000483!5.32e-09!309;UBERON:0000948!7.87e-09!24;UBERON:0005498!7.87e-09!24;UBERON:0004140!7.87e-09!24;UBERON:0009881!7.87e-09!24;UBERON:0004141!7.87e-09!24;UBERON:0003084!7.87e-09!24;UBERON:0007005!7.87e-09!24;UBERON:0004139!7.87e-09!24;UBERON:0004291!7.87e-09!24;UBERON:0007100!1.39e-08!27;UBERON:0000467!1.61e-08!625;UBERON:0002199!1.81e-08!45;UBERON:0002416!1.81e-08!45;UBERON:0000480!2.62e-08!626;UBERON:0002097!2.24e-07!40;UBERON:0002049!2.38e-07!79;UBERON:0007798!2.38e-07!79;UBERON:0001637!7.34e-07!42;UBERON:0003509!7.34e-07!42;UBERON:0004572!7.34e-07!42;UBERON:0003914!8.19e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.75e-08;22!UBERON:0007100;3.00e-08;25!UBERON:0002385;4.03e-08;31!UBERON:0001015;4.03e-08;31!UBERON:0000383;4.03e-08;31!UBERON:0002384;1.68e-07;198!UBERON:0002199;8.37e-07;46!UBERON:0002416;8.37e-07;46!UBERON:0002204;8.80e-07;70 | |||
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| ||
|short_description=p3@CCDC80 | |||
}} | }} |
Latest revision as of 14:40, 19 September 2015
Short description: | p3@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 4bp_to_NM_199511, NM_199512, uc003dzf.2, uc003dzg.2, uc003dzh.1_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | Q76M96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.88e-19 | 76 |
muscle precursor cell | 2.01e-18 | 58 |
myoblast | 2.01e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.01e-18 | 58 |
muscle cell | 5.33e-17 | 55 |
smooth muscle cell | 2.65e-13 | 43 |
smooth muscle myoblast | 2.65e-13 | 43 |
electrically responsive cell | 9.28e-13 | 61 |
electrically active cell | 9.28e-13 | 61 |
vascular associated smooth muscle cell | 1.30e-10 | 32 |
skin fibroblast | 3.91e-09 | 23 |
mesodermal cell | 1.83e-08 | 121 |
fat cell | 1.56e-07 | 15 |
extraembryonic cell | 2.98e-07 | 19 |
cardiocyte | 6.23e-07 | 16 |