FFCP PHASE1:Hg19::chr12:57824836..57824847,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:57824836..57824847,- to FFCP PHASE1:Hg19::chr12:57824836..57824847,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22864 | |EntrezGene=22864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29167 | |HGNC=29167 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2K5,B5MCU0 | |UniProt=Q9Y2K5,B5MCU0 | ||
|association_with_transcript=-48bp_to_ENST00000347140,ENST00000402412,uc001sns.2,uc001snt.2,uc009zpo.1_5end | |||
|cluster_id=chr12:57824836..57824847,- | |||
|description=CAGE_peak_5_at_R3HDM2_5end | |||
|id=chr12:57824836..57824847,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.85e-14;82 | |||
|ontology_enrichment_disease=DOID:0050687!2.85e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.71e-49;22!UBERON:0001869;4.96e-49;32!UBERON:0001950;5.51e-49;20!UBERON:0002791;8.97e-46;32!UBERON:0003528;1.44e-45;34!UBERON:0002020;1.44e-45;34!UBERON:0001893;8.35e-45;34!UBERON:0000956;6.69e-43;25!UBERON:0000203;6.69e-43;25!UBERON:0002780;3.25e-38;41!UBERON:0001890;3.25e-38;41!UBERON:0000073;5.48e-35;53!UBERON:0002616;5.48e-35;53!UBERON:0001017;2.99e-23;75!UBERON:0000955;1.50e-22;68!UBERON:0001016;2.80e-18;83!UBERON:0000200;1.33e-16;6!UBERON:0002021;7.24e-15;5!UBERON:0001872;5.85e-14;5!UBERON:0002420;7.27e-14;9!UBERON:0007245;7.27e-14;9!UBERON:0010009;7.27e-14;9!UBERON:0010011;7.27e-14;9!UBERON:0000454;7.27e-14;9!UBERON:0001871;8.33e-14;6!UBERON:0007023;8.57e-12;114!UBERON:0000369;2.59e-11;4!UBERON:0002435;2.59e-11;4!UBERON:0000204;2.59e-11;4!UBERON:0002298;2.90e-11;6!UBERON:0000125;1.15e-10;9!UBERON:0002308;1.15e-10;9!UBERON:0004733;3.93e-10;12!UBERON:0002028;3.93e-10;12!UBERON:0009663;1.33e-09;7!UBERON:0004732;2.85e-09;13!UBERON:0000349;4.73e-09;5!UBERON:0005383;4.93e-09;3!UBERON:0005382;4.93e-09;3!UBERON:0001870;6.85e-09;3!UBERON:0001896;1.60e-08;3!UBERON:0005290;1.60e-08;3!UBERON:0011216;2.40e-08;132!UBERON:0002784;1.18e-07;4!UBERON:0003296;1.53e-07;4!UBERON:0010133;1.53e-07;4!UBERON:0001905;2.73e-07;2!UBERON:0002757;2.73e-07;2!UBERON:0010134;2.73e-07;2!UBERON:0005408;2.73e-07;2!UBERON:0001899;2.73e-07;2!UBERON:0001894;3.02e-07;7!UBERON:0002771;3.89e-07;2!UBERON:0010314;5.27e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.91e-70,56;UBERON:0005068,2.91e-70,56;UBERON:0006241,2.91e-70,56;UBERON:0007135,2.91e-70,56;UBERON:0000073,5.26e-67,53;UBERON:0002616,5.26e-67,53;UBERON:0002780,8.71e-59,41;UBERON:0001890,8.71e-59,41;UBERON:0003080,8.71e-59,41;UBERON:0006240,8.71e-59,41;UBERON:0001869,4.98e-57,32;UBERON:0003528,9.68e-54,34;UBERON:0002020,9.68e-54,34;UBERON:0001893,2.60e-53,34;UBERON:0002791,8.01e-53,32;UBERON:0000955,5.16e-52,68;UBERON:0006238,5.16e-52,68;UBERON:0002619,1.21e-50,22;UBERON:0001950,2.03e-50,20;UBERON:0001017,8.47e-50,81;UBERON:0003075,1.47e-49,82;UBERON:0007284,1.47e-49,82;UBERON:0002346,9.62e-47,86;UBERON:0001016,4.51e-46,89;UBERON:0000956,4.36e-44,25;UBERON:0000203,4.36e-44,25;UBERON:0003056,6.27e-42,61;UBERON:0010371,8.86e-39,104;UBERON:0007023,1.17e-36,114;UBERON:0010314,1.27e-31,132;UBERON:0004121,5.93e-25,171;UBERON:0000924,5.93e-25,171;UBERON:0006601,5.93e-25,171;UBERON:0011216,1.53e-19,223;UBERON:0000025,4.19e-18,192;UBERON:0000200,5.41e-17,6;UBERON:0002021,8.43e-15,5;UBERON:0004111,9.93e-15,240;UBERON:0002420,1.16e-14,9;UBERON:0007245,1.16e-14,9;UBERON:0010009,1.16e-14,9;UBERON:0010011,1.16e-14,9;UBERON:0000454,1.16e-14,9;UBERON:0001872,2.19e-14,5;UBERON:0001871,3.14e-14,6;UBERON:0003076,7.85e-13,15;UBERON:0003057,7.85e-13,15;UBERON:0000369,6.73e-12,4;UBERON:0002435,6.73e-12,4;UBERON:0000204,6.73e-12,4;UBERON:0010082,6.73e-12,4;UBERON:0000483,7.40e-12,306;UBERON:0000119,1.27e-11,309;UBERON:0000125,3.14e-11,9;UBERON:0002308,3.14e-11,9;UBERON:0002298,5.34e-11,6;UBERON:0009663,3.48e-10,7;UBERON:0004733,6.48e-10,12;UBERON:0002028,6.48e-10,12;UBERON:0007277,6.48e-10,12;UBERON:0001870,1.78e-09,3;UBERON:0005383,1.78e-09,3;UBERON:0005382,1.78e-09,3;UBERON:0000349,2.54e-09,5;UBERON:0004732,4.50e-09,13;UBERON:0001896,2.03e-08,3;UBERON:0005290,2.03e-08,3;UBERON:0010096,2.03e-08,3;UBERON:0002784,1.25e-07,4;UBERON:0003296,1.58e-07,4;UBERON:0010133,1.58e-07,4;UBERON:0001905,2.84e-07,2;UBERON:0002757,2.84e-07,2;UBERON:0010134,2.84e-07,2;UBERON:0005408,2.84e-07,2;UBERON:0001899,2.84e-07,2;UBERON:0001894,3.15e-07,7;UBERON:0006222,3.15e-07,7;UBERON:0002771,3.60e-07,2;UBERON:0002702,6.08e-07,2 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0.492484232307152,0.204000691244253,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0.164201178899891,0.157421562627358,0.393364276848904,0,0.309632246632152,0,0,0,0.619737604642413,0,0.293600439334847,0.553995408531877,0,0,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0.368277635987565,0.632924774881769,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0.954053754535364,1.1384259382189,0.587237189370939,0,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0.334231370655521,0.294605907474837,0,0,0.384273959177026,0.130059347559878,0.822189523018381,0.276350017785848,0.579606171470105,0.741432815810302,0,0,0,0,0.34362744548263,0.759059076058509,0,0,0,0.451725357233318,0.255973222308837,0,0,0,0.403213486449465,0.534880391567015,0.144824403882799,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0,0,0.263504357079378,0.589405839739707,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.44905874525234,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,1.06400514659507,0,0,0,0,0.134710672069688,0,0.454072282934794,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.206651562351531,0,0,0.910161361938026,0,0,0,0.554128230968366,0.877955241761676,0,0.150238058906597,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.506328996723799,0,0.504867548488229,0,0,0,0,0.339121184620975,0,0,0.286804595389004,0.365921118388786,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0.352226082707465,0.144366447761074,0.462985512576611,0,0,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0.268675568108545,0.290633938513962,0,0,0.264145302039678,0,0.288239906833923,0.37872730027914,0.253991577168676,0,0,0,0,0,0,0.224262168690721,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0.904318131178758,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.585707074963566,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0.604780586659361,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.328508624055237,0.519254429183621,0.116210378459959,0,0.601519410909855,0.460404944679482,0,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0.316654886678627,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0.877039506583738,0,0,0,0,0.103041011647722,0.640986253728404,0.577566499444116,0,0.650060246036521,0,0,0.154048617114644,0.460511024178389,0.275673144969061,0.214840489736547,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0.384380134730212,0.638063562472921,0.4046311234222,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.699869440489966,0.192444225451024,0,0,0.282431402330337,0.43050537267123,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0.185803175125719,0,0.355709216742071,0,0,0,0,0,0,0.456469358066384,0.156679895773023,2.50634477090067,0,0.1605880751037,0.403599414382095,0.425846237690326,0.343505344755765,0.307240764308458,0.223676107892416,0,0.19538809540204,0.556812347790485,0,0,0,0,0.37428108081644,0,0.606802608747567,0,0.284136146806413,0.23874448473769,0.296964680832639,0,1.9882952955326,1.26602474769461,0.333926115068718,0,0.422250816255987,0.398495976502139,0,0,0.20453736500431,0,0,0.269605053441981,1.07412704805365,0,0,0,0,0.969332746095218,1.29875337426592,0,1.5625665665114,0.61221999997337,0,0.227586896570999,0.254253650292766,0,1.03423011972439,0.291604613383254,0,1.77148277162768,1.68835014075571,1.52581736317083,1.10579259931225,0,1.53569778007781,0.10893846351899,0.278847488557207,0.384751292518985,0,0.23056390438806,0.269272933229316,0.217294743844016,0,0.0915975934018623,1.06606955203727,0,0.156980256395025,0.33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| ||
|short_description=p5@R3HDM2 | |||
}} | }} |
Latest revision as of 14:14, 19 September 2015
Short description: | p5@R3HDM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_R3HDM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_ENST00000347140, ENST00000402412, uc001sns.2, uc001snt.2, uc009zpo.1_5end |
EntrezGene: | R3HDM2 |
HGNC: | 29167 |
UniProt: | Q9Y2K5B5MCU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data