FFCP PHASE1:Hg19::chr3:111718142..111718162,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:111718142..111718162,+
|short_description=p3@TAGLN3
|description=CAGE_peak_3_at_TAGLN3_5end
|association_with_transcript=-32bp_to_ENST00000494932_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29114 | |EntrezGene=29114 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29868 | |HGNC=29868 | ||
|TSSclassifier=strong | |||
|UniProt=C9JCX3 | |UniProt=C9JCX3 | ||
|association_with_transcript=-32bp_to_ENST00000494932_5end | |||
|cluster_id=chr3:111718142..111718162,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_TAGLN3_5end | |||
|id=chr3:111718142..111718162,+ | |||
|ontology_enrichment_celltype=CL:1000507!2.67e-08!12;CL:1000494!2.67e-08!12;CL:1000449!7.64e-08!16;CL:0002319!5.52e-07!25;CL:0000221!7.98e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.37e-12;10!CL:1000494;2.37e-12;10!CL:1000449;1.95e-09;15!CL:1000497;4.32e-08;17!CL:0002518;4.32e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.31e-12,10;CL:1000494,1.31e-12,10;CL:1000449,1.19e-09,15;CL:1000497,2.83e-08,17;CL:0002518,2.83e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.27e-15;82!UBERON:0006215;1.93e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@TAGLN3 | |||
}} | }} |
Latest revision as of 13:11, 19 September 2015
Short description: | p3@TAGLN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TAGLN3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -32bp_to_ENST00000494932_5end |
EntrezGene: | TAGLN3 |
HGNC: | 29868 |
UniProt: | C9JCX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.31e-12 | 10 |
nephron tubule epithelial cell | 1.31e-12 | 10 |
epithelial cell of nephron | 1.19e-09 | 15 |
kidney cell | 2.83e-08 | 17 |
kidney epithelial cell | 2.83e-08 | 17 |