FFCP PHASE1:Hg19::chr7:75831181..75831236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222183 | |EntrezGene=222183 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26729 | |HGNC=26729 | ||
|TSSclassifier=strong | |||
|UniProt=A6NNA2,F5GYC8 | |UniProt=A6NNA2,F5GYC8 | ||
|association_with_transcript=0bp_to_ENST00000326382,ENST00000388802,NM_001110199,uc010ldi.2_5end | |association_with_transcript=0bp_to_ENST00000326382,ENST00000388802,NM_001110199,uc010ldi.2_5end | ||
|cluster_id=chr7:75831181..75831236,+ | |||
|coexpression_cluster_id=C1756 | |coexpression_cluster_id=C1756 | ||
|description=CAGE_peak_1_at_SRRM3_5end | |description=CAGE_peak_1_at_SRRM3_5end | ||
|id=chr7:75831181..75831236,+ | |id=chr7:75831181..75831236,+ | ||
|ontology_enrichment_celltype=CL:0000047!1.10e-09!8;CL:0000540!9.50e-08!6;CL:0000031!9.50e-08!6;CL:0000404!9.50e-08!6 | |ontology_enrichment_celltype=CL:0000047!1.10e-09!8;CL:0000540!9.50e-08!6;CL:0000031!9.50e-08!6;CL:0000404!9.50e-08!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.95e-21;82!UBERON:0006215;1.03e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.35e-67!82;UBERON:0000073!7.69e-66!94;UBERON:0001016!7.69e-66!94;UBERON:0005743!1.27e-65!86;UBERON:0001049!3.70e-61!57;UBERON:0005068!3.70e-61!57;UBERON:0006241!3.70e-61!57;UBERON:0007135!3.70e-61!57;UBERON:0000955!4.78e-53!69;UBERON:0006238!4.78e-53!69;UBERON:0002616!2.56e-51!59;UBERON:0003075!2.88e-49!86;UBERON:0007284!2.88e-49!86;UBERON:0002780!1.02e-48!41;UBERON:0001890!1.02e-48!41;UBERON:0006240!1.02e-48!41;UBERON:0002346!6.36e-48!90;UBERON:0003080!3.10e-47!42;UBERON:0007023!1.18e-43!115;UBERON:0002020!1.30e-39!34;UBERON:0003528!1.30e-39!34;UBERON:0001893!1.68e-39!34;UBERON:0002791!3.65e-38!33;UBERON:0001869!2.10e-37!32;UBERON:0004121!5.71e-37!169;UBERON:0003056!9.12e-37!61;UBERON:0000924!1.06e-36!173;UBERON:0006601!1.06e-36!173;UBERON:0002619!1.24e-32!22;UBERON:0000033!1.83e-30!123;UBERON:0001950!4.30e-30!20;UBERON:0000153!3.42e-29!129;UBERON:0007811!3.42e-29!129;UBERON:0000956!7.16e-28!25;UBERON:0000203!7.16e-28!25;UBERON:0003076!1.62e-14!15;UBERON:0003057!1.62e-14!15;UBERON:0000025!1.08e-13!194;UBERON:0002420!2.31e-13!9;UBERON:0007245!2.31e-13!9;UBERON:0010009!2.31e-13!9;UBERON:0010011!2.31e-13!9;UBERON:0000454!2.31e-13!9;UBERON:0002308!3.77e-13!9;UBERON:0000125!3.77e-13!9;UBERON:0004732!2.49e-12!13;UBERON:0001871!3.04e-12!7;UBERON:0004733!2.39e-11!12;UBERON:0002028!2.39e-11!12;UBERON:0007277!2.39e-11!12;UBERON:0009663!1.02e-10!7;UBERON:0000064!1.38e-10!219;UBERON:0001894!1.73e-10!7;UBERON:0006222!1.73e-10!7;UBERON:0000200!6.98e-10!6;UBERON:0004111!7.42e-10!241;UBERON:0001872!1.45e-08!5;UBERON:0002021!1.84e-08!5;UBERON:0002298!2.13e-08!8;UBERON:0000349!3.86e-08!5;UBERON:0002680!4.53e-08!9;UBERON:0001895!4.53e-08!9;UBERON:0010092!4.53e-08!9;UBERON:0000483!1.31e-07!309;UBERON:0000369!1.78e-07!4;UBERON:0002435!1.78e-07!4;UBERON:0000204!1.78e-07!4;UBERON:0010082!1.78e-07!4;UBERON:0000922!1.91e-07!612;UBERON:0000119!2.32e-07!312;UBERON:0000477!2.90e-07!286;UBERON:0003296!4.44e-07!4;UBERON:0010133!4.44e-07!4 | |ontology_enrichment_uberon=UBERON:0001017!1.35e-67!82;UBERON:0000073!7.69e-66!94;UBERON:0001016!7.69e-66!94;UBERON:0005743!1.27e-65!86;UBERON:0001049!3.70e-61!57;UBERON:0005068!3.70e-61!57;UBERON:0006241!3.70e-61!57;UBERON:0007135!3.70e-61!57;UBERON:0000955!4.78e-53!69;UBERON:0006238!4.78e-53!69;UBERON:0002616!2.56e-51!59;UBERON:0003075!2.88e-49!86;UBERON:0007284!2.88e-49!86;UBERON:0002780!1.02e-48!41;UBERON:0001890!1.02e-48!41;UBERON:0006240!1.02e-48!41;UBERON:0002346!6.36e-48!90;UBERON:0003080!3.10e-47!42;UBERON:0007023!1.18e-43!115;UBERON:0002020!1.30e-39!34;UBERON:0003528!1.30e-39!34;UBERON:0001893!1.68e-39!34;UBERON:0002791!3.65e-38!33;UBERON:0001869!2.10e-37!32;UBERON:0004121!5.71e-37!169;UBERON:0003056!9.12e-37!61;UBERON:0000924!1.06e-36!173;UBERON:0006601!1.06e-36!173;UBERON:0002619!1.24e-32!22;UBERON:0000033!1.83e-30!123;UBERON:0001950!4.30e-30!20;UBERON:0000153!3.42e-29!129;UBERON:0007811!3.42e-29!129;UBERON:0000956!7.16e-28!25;UBERON:0000203!7.16e-28!25;UBERON:0003076!1.62e-14!15;UBERON:0003057!1.62e-14!15;UBERON:0000025!1.08e-13!194;UBERON:0002420!2.31e-13!9;UBERON:0007245!2.31e-13!9;UBERON:0010009!2.31e-13!9;UBERON:0010011!2.31e-13!9;UBERON:0000454!2.31e-13!9;UBERON:0002308!3.77e-13!9;UBERON:0000125!3.77e-13!9;UBERON:0004732!2.49e-12!13;UBERON:0001871!3.04e-12!7;UBERON:0004733!2.39e-11!12;UBERON:0002028!2.39e-11!12;UBERON:0007277!2.39e-11!12;UBERON:0009663!1.02e-10!7;UBERON:0000064!1.38e-10!219;UBERON:0001894!1.73e-10!7;UBERON:0006222!1.73e-10!7;UBERON:0000200!6.98e-10!6;UBERON:0004111!7.42e-10!241;UBERON:0001872!1.45e-08!5;UBERON:0002021!1.84e-08!5;UBERON:0002298!2.13e-08!8;UBERON:0000349!3.86e-08!5;UBERON:0002680!4.53e-08!9;UBERON:0001895!4.53e-08!9;UBERON:0010092!4.53e-08!9;UBERON:0000483!1.31e-07!309;UBERON:0000369!1.78e-07!4;UBERON:0002435!1.78e-07!4;UBERON:0000204!1.78e-07!4;UBERON:0010082!1.78e-07!4;UBERON:0000922!1.91e-07!612;UBERON:0000119!2.32e-07!312;UBERON:0000477!2.90e-07!286;UBERON:0003296!4.44e-07!4;UBERON:0010133!4.44e-07!4 | ||
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|short_description=p1@SRRM3 | |short_description=p1@SRRM3 | ||
}} | }} |
Latest revision as of 13:06, 19 September 2015
Short description: | p1@SRRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRRM3_5end |
Coexpression cluster: | C1756_cerebellum_small_merkel_putamen_caudate_pineal_occipital |
Association with transcript: | 0bp_to_ENST00000326382, ENST00000388802, NM_001110199, uc010ldi.2_5end |
EntrezGene: | SRRM3 |
HGNC: | 26729 |
UniProt: | A6NNA2F5GYC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data