FFCP PHASE1:Hg19::chr19:51143096..51143143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84258 | |EntrezGene=84258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11511 | |HGNC=11511 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQG1 | |UniProt=Q9BQG1 | ||
|association_with_transcript=-4bp_to_NM_001160328,NM_001160329,uc002psv.2,uc010ycd.1_5end | |association_with_transcript=-4bp_to_NM_001160328,NM_001160329,uc002psv.2,uc010ycd.1_5end | ||
|cluster_id=chr19:51143096..51143143,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_SYT3_5end | |description=CAGE_peak_1_at_SYT3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.19e-07;6!CL:0000404;3.19e-07;6 | |ontology_enrichment_celltype_v019=CL:0000540;3.19e-07;6!CL:0000404;3.19e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.67e-08,8;CL:0000540,2.19e-07,6;CL:0000031,2.19e-07,6;CL:0000404,2.19e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.57e-21;82!UBERON:0006215;2.36e-09;3!UBERON:0006241;3.98e-09;3!UBERON:0003057;3.98e-09;3!CL:0000031;3.19e-07;6 | |ontology_enrichment_development_v019=UBERON:0006601;5.57e-21;82!UBERON:0006215;2.36e-09;3!UBERON:0006241;3.98e-09;3!UBERON:0003057;3.98e-09;3!CL:0000031;3.19e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.77e-41!82;UBERON:0005743!3.14e-41!86;UBERON:0000073!3.48e-40!94;UBERON:0001016!3.48e-40!94;UBERON:0001049!5.16e-39!57;UBERON:0005068!5.16e-39!57;UBERON:0006241!5.16e-39!57;UBERON:0007135!5.16e-39!57;UBERON:0000955!1.71e-32!69;UBERON:0006238!1.71e-32!69;UBERON:0002346!4.84e-32!90;UBERON:0002616!2.20e-31!59;UBERON:0002780!1.07e-30!41;UBERON:0001890!1.07e-30!41;UBERON:0006240!1.07e-30!41;UBERON:0003080!1.36e-29!42;UBERON:0003075!1.72e-29!86;UBERON:0007284!1.72e-29!86;UBERON:0002020!1.31e-26!34;UBERON:0003528!1.31e-26!34;UBERON:0001893!1.63e-26!34;UBERON:0002791!1.77e-25!33;UBERON:0001869!7.92e-25!32;UBERON:0007023!1.07e-23!115;UBERON:0002619!3.05e-22!22;UBERON:0003056!3.22e-22!61;UBERON:0001950!2.28e-20!20;UBERON:0000924!2.75e-19!173;UBERON:0006601!2.75e-19!173;UBERON:0000956!1.53e-18!25;UBERON:0000203!1.53e-18!25;UBERON:0004121!1.90e-17!169;UBERON:0000033!9.61e-17!123;UBERON:0000153!1.29e-15!129;UBERON:0007811!1.29e-15!129;UBERON:0000025!2.55e-11!194;UBERON:0003076!2.28e-10!15;UBERON:0003057!2.28e-10!15;UBERON:0002420!1.10e-09!9;UBERON:0007245!1.10e-09!9;UBERON:0010009!1.10e-09!9;UBERON:0010011!1.10e-09!9;UBERON:0000454!1.10e-09!9;UBERON:0002308!1.30e-09!9;UBERON:0000125!1.30e-09!9;UBERON:0004111!8.08e-09!241;UBERON:0004733!1.02e-07!12;UBERON:0002028!1.02e-07!12;UBERON:0007277!1.02e-07!12;UBERON:0000200!1.03e-07!6;UBERON:0009663!1.19e-07!7;UBERON:0001871!3.09e-07!7;UBERON:0002680!6.46e-07!9;UBERON:0001895!6.46e-07!9;UBERON:0010092!6.46e-07!9;UBERON:0004732!6.96e-07!13 | |ontology_enrichment_uberon=UBERON:0001017!1.77e-41!82;UBERON:0005743!3.14e-41!86;UBERON:0000073!3.48e-40!94;UBERON:0001016!3.48e-40!94;UBERON:0001049!5.16e-39!57;UBERON:0005068!5.16e-39!57;UBERON:0006241!5.16e-39!57;UBERON:0007135!5.16e-39!57;UBERON:0000955!1.71e-32!69;UBERON:0006238!1.71e-32!69;UBERON:0002346!4.84e-32!90;UBERON:0002616!2.20e-31!59;UBERON:0002780!1.07e-30!41;UBERON:0001890!1.07e-30!41;UBERON:0006240!1.07e-30!41;UBERON:0003080!1.36e-29!42;UBERON:0003075!1.72e-29!86;UBERON:0007284!1.72e-29!86;UBERON:0002020!1.31e-26!34;UBERON:0003528!1.31e-26!34;UBERON:0001893!1.63e-26!34;UBERON:0002791!1.77e-25!33;UBERON:0001869!7.92e-25!32;UBERON:0007023!1.07e-23!115;UBERON:0002619!3.05e-22!22;UBERON:0003056!3.22e-22!61;UBERON:0001950!2.28e-20!20;UBERON:0000924!2.75e-19!173;UBERON:0006601!2.75e-19!173;UBERON:0000956!1.53e-18!25;UBERON:0000203!1.53e-18!25;UBERON:0004121!1.90e-17!169;UBERON:0000033!9.61e-17!123;UBERON:0000153!1.29e-15!129;UBERON:0007811!1.29e-15!129;UBERON:0000025!2.55e-11!194;UBERON:0003076!2.28e-10!15;UBERON:0003057!2.28e-10!15;UBERON:0002420!1.10e-09!9;UBERON:0007245!1.10e-09!9;UBERON:0010009!1.10e-09!9;UBERON:0010011!1.10e-09!9;UBERON:0000454!1.10e-09!9;UBERON:0002308!1.30e-09!9;UBERON:0000125!1.30e-09!9;UBERON:0004111!8.08e-09!241;UBERON:0004733!1.02e-07!12;UBERON:0002028!1.02e-07!12;UBERON:0007277!1.02e-07!12;UBERON:0000200!1.03e-07!6;UBERON:0009663!1.19e-07!7;UBERON:0001871!3.09e-07!7;UBERON:0002680!6.46e-07!9;UBERON:0001895!6.46e-07!9;UBERON:0010092!6.46e-07!9;UBERON:0004732!6.96e-07!13 | ||
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| ||
|short_description=p1@SYT3 | |short_description=p1@SYT3 | ||
}} | }} |
Latest revision as of 12:20, 19 September 2015
Short description: | p1@SYT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYT3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -4bp_to_NM_001160328, NM_001160329, uc002psv.2, uc010ycd.1_5end |
EntrezGene: | SYT3 |
HGNC: | 11511 |
UniProt: | Q9BQG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.67e-08 | 8 |
neuron | 2.19e-07 | 6 |
neuroblast | 2.19e-07 | 6 |
electrically signaling cell | 2.19e-07 | 6 |