FFCP PHASE1:Hg19::chr19:51143096..51143143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84258 | |EntrezGene=84258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11511 | |HGNC=11511 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQG1 | |UniProt=Q9BQG1 | ||
|association_with_transcript=-4bp_to_NM_001160328,NM_001160329,uc002psv.2,uc010ycd.1_5end | |association_with_transcript=-4bp_to_NM_001160328,NM_001160329,uc002psv.2,uc010ycd.1_5end | ||
|cluster_id=chr19:51143096..51143143,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SYT3_5end | |description=CAGE_peak_1_at_SYT3_5end | ||
|id=chr19:51143096..51143143,- | |id=chr19:51143096..51143143,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.19e-07;6!CL:0000404;3.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.67e-08,8;CL:0000540,2.19e-07,6;CL:0000031,2.19e-07,6;CL:0000404,2.19e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.57e-21;82!UBERON:0006215;2.36e-09;3!UBERON:0006241;3.98e-09;3!UBERON:0003057;3.98e-09;3!CL:0000031;3.19e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.77e-41!82;UBERON:0005743!3.14e-41!86;UBERON:0000073!3.48e-40!94;UBERON:0001016!3.48e-40!94;UBERON:0001049!5.16e-39!57;UBERON:0005068!5.16e-39!57;UBERON:0006241!5.16e-39!57;UBERON:0007135!5.16e-39!57;UBERON:0000955!1.71e-32!69;UBERON:0006238!1.71e-32!69;UBERON:0002346!4.84e-32!90;UBERON:0002616!2.20e-31!59;UBERON:0002780!1.07e-30!41;UBERON:0001890!1.07e-30!41;UBERON:0006240!1.07e-30!41;UBERON:0003080!1.36e-29!42;UBERON:0003075!1.72e-29!86;UBERON:0007284!1.72e-29!86;UBERON:0002020!1.31e-26!34;UBERON:0003528!1.31e-26!34;UBERON:0001893!1.63e-26!34;UBERON:0002791!1.77e-25!33;UBERON:0001869!7.92e-25!32;UBERON:0007023!1.07e-23!115;UBERON:0002619!3.05e-22!22;UBERON:0003056!3.22e-22!61;UBERON:0001950!2.28e-20!20;UBERON:0000924!2.75e-19!173;UBERON:0006601!2.75e-19!173;UBERON:0000956!1.53e-18!25;UBERON:0000203!1.53e-18!25;UBERON:0004121!1.90e-17!169;UBERON:0000033!9.61e-17!123;UBERON:0000153!1.29e-15!129;UBERON:0007811!1.29e-15!129;UBERON:0000025!2.55e-11!194;UBERON:0003076!2.28e-10!15;UBERON:0003057!2.28e-10!15;UBERON:0002420!1.10e-09!9;UBERON:0007245!1.10e-09!9;UBERON:0010009!1.10e-09!9;UBERON:0010011!1.10e-09!9;UBERON:0000454!1.10e-09!9;UBERON:0002308!1.30e-09!9;UBERON:0000125!1.30e-09!9;UBERON:0004111!8.08e-09!241;UBERON:0004733!1.02e-07!12;UBERON:0002028!1.02e-07!12;UBERON:0007277!1.02e-07!12;UBERON:0000200!1.03e-07!6;UBERON:0009663!1.19e-07!7;UBERON:0001871!3.09e-07!7;UBERON:0002680!6.46e-07!9;UBERON:0001895!6.46e-07!9;UBERON:0010092!6.46e-07!9;UBERON:0004732!6.96e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.26e-61;34!UBERON:0003528;2.37e-61;34!UBERON:0002020;2.37e-61;34!UBERON:0001869;1.32e-60;32!UBERON:0002780;2.23e-60;41!UBERON:0001890;2.23e-60;41!UBERON:0002791;3.52e-60;32!UBERON:0002619;2.50e-58;22!UBERON:0000073;2.31e-54;53!UBERON:0002616;2.31e-54;53!UBERON:0001950;2.48e-53;20!UBERON:0000956;7.63e-51;25!UBERON:0000203;7.63e-51;25!UBERON:0000955;2.33e-40;68!UBERON:0001017;1.20e-37;75!UBERON:0001016;1.29e-35;83!UBERON:0002420;1.59e-23;9!UBERON:0007245;1.59e-23;9!UBERON:0010009;1.59e-23;9!UBERON:0010011;1.59e-23;9!UBERON:0000454;1.59e-23;9!UBERON:0000125;2.15e-23;9!UBERON:0002308;2.15e-23;9!UBERON:0000200;3.53e-18;6!UBERON:0009663;4.14e-18;7!UBERON:0002021;1.97e-15;5!UBERON:0001872;2.53e-15;5!UBERON:0001871;3.56e-15;6!UBERON:0000349;1.13e-14;5!UBERON:0004733;2.75e-14;12!UBERON:0002028;2.75e-14;12!UBERON:0007023;6.20e-14;114!UBERON:0011216;1.56e-13;132!UBERON:0001894;3.08e-13;7!UBERON:0004732;4.50e-13;13!UBERON:0002298;4.74e-12;6!UBERON:0000369;1.92e-11;4!UBERON:0002435;1.92e-11;4!UBERON:0000204;1.92e-11;4!UBERON:0002680;2.77e-11;9!UBERON:0001895;2.77e-11;9!UBERON:0002784;1.31e-10;4!UBERON:0001870;6.99e-10;3!UBERON:0000988;1.15e-09;3!UBERON:0002240;3.98e-09;3!UBERON:0005174;3.98e-09;3!UBERON:0001137;3.98e-09;3!UBERON:0010314;6.58e-09;132!UBERON:0005383;8.77e-09;3!UBERON:0005382;8.77e-09;3!UBERON:0002702;3.32e-07;2!UBERON:0001876;3.97e-07;2!UBERON:0002771;5.33e-07;2!UBERON:0002148;5.49e-07;2!UBERON:0006331;5.49e-07;2!UBERON:0009662;5.49e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.46e-106,56;UBERON:0005068,6.46e-106,56;UBERON:0006241,6.46e-106,56;UBERON:0007135,6.46e-106,56;UBERON:0001017,1.47e-104,81;UBERON:0001016,1.07e-99,89;UBERON:0000073,5.26e-98,53;UBERON:0002616,5.26e-98,53;UBERON:0000955,4.44e-88,68;UBERON:0006238,4.44e-88,68;UBERON:0002780,5.09e-85,41;UBERON:0001890,5.09e-85,41;UBERON:0003080,5.09e-85,41;UBERON:0006240,5.09e-85,41;UBERON:0003528,5.29e-73,34;UBERON:0002020,5.29e-73,34;UBERON:0001893,9.76e-73,34;UBERON:0003075,8.31e-72,82;UBERON:0007284,8.31e-72,82;UBERON:0002346,7.69e-71,86;UBERON:0001869,3.94e-68,32;UBERON:0002791,1.39e-67,32;UBERON:0002619,2.07e-58,22;UBERON:0003056,2.51e-57,61;UBERON:0010371,4.65e-54,104;UBERON:0001950,2.56e-53,20;UBERON:0000956,6.47e-51,25;UBERON:0000203,6.47e-51,25;UBERON:0004121,1.03e-47,171;UBERON:0000924,1.03e-47,171;UBERON:0006601,1.03e-47,171;UBERON:0007023,2.83e-44,114;UBERON:0010314,6.73e-44,132;UBERON:0011216,6.63e-35,223;UBERON:0000025,8.24e-25,192;UBERON:0002420,2.25e-23,9;UBERON:0007245,2.25e-23,9;UBERON:0010009,2.25e-23,9;UBERON:0010011,2.25e-23,9;UBERON:0000454,2.25e-23,9;UBERON:0000125,3.49e-23,9;UBERON:0002308,3.49e-23,9;UBERON:0003076,3.17e-21,15;UBERON:0003057,3.17e-21,15;UBERON:0000200,4.36e-18,6;UBERON:0009663,6.50e-18,7;UBERON:0004111,2.32e-17,240;UBERON:0002021,1.98e-15,5;UBERON:0001872,2.65e-15,5;UBERON:0001871,3.76e-15,6;UBERON:0000349,9.44e-15,5;UBERON:0004733,1.99e-14,12;UBERON:0002028,1.99e-14,12;UBERON:0007277,1.99e-14,12;UBERON:0001894,2.79e-13,7;UBERON:0006222,2.79e-13,7;UBERON:0004732,3.35e-13,13;UBERON:0000483,1.87e-12,306;UBERON:0000119,3.25e-12,309;UBERON:0002298,3.47e-12,6;UBERON:0000369,1.77e-11,4;UBERON:0002435,1.77e-11,4;UBERON:0000204,1.77e-11,4;UBERON:0010082,1.77e-11,4;UBERON:0002680,2.35e-11,9;UBERON:0001895,2.35e-11,9;UBERON:0010092,2.35e-11,9;UBERON:0002784,1.12e-10,4;UBERON:0001870,7.11e-10,3;UBERON:0000988,1.01e-09,3;UBERON:0002240,3.46e-09,3;UBERON:0005174,3.46e-09,3;UBERON:0001137,3.46e-09,3;UBERON:0005383,6.96e-09,3;UBERON:0005382,6.96e-09,3;UBERON:0000923,6.44e-08,560;UBERON:0010316,6.44e-08,560;UBERON:0005291,6.44e-08,560;UBERON:0006598,6.44e-08,560;UBERON:0010317,6.44e-08,560;UBERON:0002532,6.44e-08,560;UBERON:0002050,9.38e-08,564;UBERON:0000922,3.35e-07,592;UBERON:0001876,3.53e-07,2;UBERON:0002702,3.86e-07,2;UBERON:0005423,4.37e-07,581;UBERON:0002148,5.67e-07,2;UBERON:0006331,5.67e-07,2;UBERON:0009662,5.67e-07,2;UBERON:0002771,6.19e-07,2 | |||
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| ||
|short_description=p1@SYT3 | |short_description=p1@SYT3 | ||
}} | }} |
Latest revision as of 12:20, 19 September 2015
Short description: | p1@SYT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYT3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -4bp_to_NM_001160328, NM_001160329, uc002psv.2, uc010ycd.1_5end |
EntrezGene: | SYT3 |
HGNC: | 11511 |
UniProt: | Q9BQG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.67e-08 | 8 |
neuron | 2.19e-07 | 6 |
neuroblast | 2.19e-07 | 6 |
electrically signaling cell | 2.19e-07 | 6 |