FFCP PHASE1:Hg19::chr22:25202173..25202190,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=129049 | |EntrezGene=129049 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29410 | |HGNC=29410 | ||
|TSSclassifier=strong | |||
|UniProt=C9J7S8 | |UniProt=C9J7S8 | ||
|association_with_transcript=0bp_to_ENST00000403206_5end | |association_with_transcript=0bp_to_ENST00000403206_5end | ||
|cluster_id=chr22:25202173..25202190,+ | |||
|coexpression_cluster_id=C555 | |coexpression_cluster_id=C555 | ||
|description=CAGE_peak_3_at_SGSM1_5end | |description=CAGE_peak_3_at_SGSM1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.32e-19;82!UBERON:0006215;2.75e-10;3!UBERON:0010122;3.16e-07;2!UBERON:0005062;7.79e-07;4!UBERON:0007284;7.79e-07;4 | |ontology_enrichment_development_v019=UBERON:0006601;6.32e-19;82!UBERON:0006215;2.75e-10;3!UBERON:0010122;3.16e-07;2!UBERON:0005062;7.79e-07;4!UBERON:0007284;7.79e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-49!115;UBERON:0001049!3.96e-35!57;UBERON:0005068!3.96e-35!57;UBERON:0006241!3.96e-35!57;UBERON:0007135!3.96e-35!57;UBERON:0003075!2.22e-28!86;UBERON:0007284!2.22e-28!86;UBERON:0001017!2.26e-28!82;UBERON:0002346!4.14e-28!90;UBERON:0002616!4.29e-28!59;UBERON:0005743!2.81e-27!86;UBERON:0000073!3.80e-27!94;UBERON:0001016!3.80e-27!94;UBERON:0002780!5.99e-26!41;UBERON:0001890!5.99e-26!41;UBERON:0006240!5.99e-26!41;UBERON:0000955!6.01e-26!69;UBERON:0006238!6.01e-26!69;UBERON:0003080!5.39e-25!42;UBERON:0002020!8.22e-22!34;UBERON:0003528!8.22e-22!34;UBERON:0001893!1.33e-21!34;UBERON:0002791!1.20e-20!33;UBERON:0001869!3.03e-20!32;UBERON:0002619!1.28e-18!22;UBERON:0001950!6.30e-17!20;UBERON:0003056!1.04e-15!61;UBERON:0000956!1.82e-15!25;UBERON:0000203!1.82e-15!25;UBERON:0000153!1.56e-13!129;UBERON:0007811!1.56e-13!129;UBERON:0000924!2.53e-13!173;UBERON:0006601!2.53e-13!173;UBERON:0004121!3.93e-13!169;UBERON:0000033!5.37e-12!123;UBERON:0000025!1.48e-11!194;UBERON:0003076!3.64e-11!15;UBERON:0003057!3.64e-11!15;UBERON:0004732!2.13e-09!13;UBERON:0000064!2.37e-09!219;UBERON:0004111!4.41e-09!241;UBERON:0004733!1.41e-08!12;UBERON:0002028!1.41e-08!12;UBERON:0007277!1.41e-08!12;UBERON:0002308!7.11e-08!9;UBERON:0000125!7.11e-08!9;UBERON:0002420!9.16e-08!9;UBERON:0007245!9.16e-08!9;UBERON:0010009!9.16e-08!9;UBERON:0010011!9.16e-08!9;UBERON:0000454!9.16e-08!9;UBERON:0000477!1.41e-07!286;UBERON:0000481!2.90e-07!347;UBERON:0001871!5.06e-07!7;UBERON:0002298!6.27e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!1.23e-49!115;UBERON:0001049!3.96e-35!57;UBERON:0005068!3.96e-35!57;UBERON:0006241!3.96e-35!57;UBERON:0007135!3.96e-35!57;UBERON:0003075!2.22e-28!86;UBERON:0007284!2.22e-28!86;UBERON:0001017!2.26e-28!82;UBERON:0002346!4.14e-28!90;UBERON:0002616!4.29e-28!59;UBERON:0005743!2.81e-27!86;UBERON:0000073!3.80e-27!94;UBERON:0001016!3.80e-27!94;UBERON:0002780!5.99e-26!41;UBERON:0001890!5.99e-26!41;UBERON:0006240!5.99e-26!41;UBERON:0000955!6.01e-26!69;UBERON:0006238!6.01e-26!69;UBERON:0003080!5.39e-25!42;UBERON:0002020!8.22e-22!34;UBERON:0003528!8.22e-22!34;UBERON:0001893!1.33e-21!34;UBERON:0002791!1.20e-20!33;UBERON:0001869!3.03e-20!32;UBERON:0002619!1.28e-18!22;UBERON:0001950!6.30e-17!20;UBERON:0003056!1.04e-15!61;UBERON:0000956!1.82e-15!25;UBERON:0000203!1.82e-15!25;UBERON:0000153!1.56e-13!129;UBERON:0007811!1.56e-13!129;UBERON:0000924!2.53e-13!173;UBERON:0006601!2.53e-13!173;UBERON:0004121!3.93e-13!169;UBERON:0000033!5.37e-12!123;UBERON:0000025!1.48e-11!194;UBERON:0003076!3.64e-11!15;UBERON:0003057!3.64e-11!15;UBERON:0004732!2.13e-09!13;UBERON:0000064!2.37e-09!219;UBERON:0004111!4.41e-09!241;UBERON:0004733!1.41e-08!12;UBERON:0002028!1.41e-08!12;UBERON:0007277!1.41e-08!12;UBERON:0002308!7.11e-08!9;UBERON:0000125!7.11e-08!9;UBERON:0002420!9.16e-08!9;UBERON:0007245!9.16e-08!9;UBERON:0010009!9.16e-08!9;UBERON:0010011!9.16e-08!9;UBERON:0000454!9.16e-08!9;UBERON:0000477!1.41e-07!286;UBERON:0000481!2.90e-07!347;UBERON:0001871!5.06e-07!7;UBERON:0002298!6.27e-07!8 | ||
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| ||
|short_description=p3@SGSM1 | |short_description=p3@SGSM1 | ||
}} | }} |
Latest revision as of 11:32, 19 September 2015
Short description: | p3@SGSM1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SGSM1_5end |
Coexpression cluster: | C555_cerebellum_pineal_occipital_middle_parietal_medial_locus |
Association with transcript: | 0bp_to_ENST00000403206_5end |
EntrezGene: | SGSM1 |
HGNC: | 29410 |
UniProt: | C9J7S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data