FFCP PHASE1:Hg19::chr4:96012601..96012612,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=658 | |EntrezGene=658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1077 | |HGNC=1077 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAW8 | |UniProt=D6RAW8 | ||
|association_with_transcript=16bp_to_ENST00000502683_5end | |association_with_transcript=16bp_to_ENST00000502683_5end | ||
|cluster_id=chr4:96012601..96012612,+ | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_17_at_BMPR1B_5end | |description=CAGE_peak_17_at_BMPR1B_5end | ||
|id=chr4:96012601..96012612,+ | |id=chr4:96012601..96012612,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;6.62e-41;1!UBERON:0007297;3.11e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.84e-60!57;UBERON:0005068!1.84e-60!57;UBERON:0006241!1.84e-60!57;UBERON:0007135!1.84e-60!57;UBERON:0007023!1.83e-56!115;UBERON:0002616!7.08e-54!59;UBERON:0000955!4.08e-48!69;UBERON:0006238!4.08e-48!69;UBERON:0005743!1.38e-46!86;UBERON:0001017!6.56e-46!82;UBERON:0003075!5.85e-44!86;UBERON:0007284!5.85e-44!86;UBERON:0002346!1.01e-41!90;UBERON:0000073!1.32e-41!94;UBERON:0001016!1.32e-41!94;UBERON:0002780!1.73e-38!41;UBERON:0001890!1.73e-38!41;UBERON:0006240!1.73e-38!41;UBERON:0003080!1.75e-37!42;UBERON:0002020!1.07e-33!34;UBERON:0003528!1.07e-33!34;UBERON:0001893!3.29e-33!34;UBERON:0002791!2.78e-30!33;UBERON:0000153!3.95e-29!129;UBERON:0007811!3.95e-29!129;UBERON:0002298!1.73e-28!8;UBERON:0001869!2.01e-27!32;UBERON:0003056!2.93e-27!61;UBERON:0000033!1.99e-26!123;UBERON:0002308!1.21e-24!9;UBERON:0000125!1.21e-24!9;UBERON:0003076!1.76e-24!15;UBERON:0003057!1.76e-24!15;UBERON:0004733!1.80e-24!12;UBERON:0002028!1.80e-24!12;UBERON:0007277!1.80e-24!12;UBERON:0004732!1.73e-22!13;UBERON:0004121!2.30e-20!169;UBERON:0000924!9.68e-20!173;UBERON:0006601!9.68e-20!173;UBERON:0000369!6.29e-19!4;UBERON:0002435!6.29e-19!4;UBERON:0000204!6.29e-19!4;UBERON:0010082!6.29e-19!4;UBERON:0002420!6.80e-18!9;UBERON:0007245!6.80e-18!9;UBERON:0010009!6.80e-18!9;UBERON:0010011!6.80e-18!9;UBERON:0000454!6.80e-18!9;UBERON:0002619!1.17e-17!22;UBERON:0000025!3.79e-17!194;UBERON:0009663!2.46e-16!7;UBERON:0004111!5.75e-16!241;UBERON:0001950!1.20e-15!20;UBERON:0001896!1.84e-15!3;UBERON:0005290!1.84e-15!3;UBERON:0010096!1.84e-15!3;UBERON:0000956!2.10e-15!25;UBERON:0000203!2.10e-15!25;UBERON:0000988!5.48e-15!3;UBERON:0005383!5.48e-15!3;UBERON:0005382!5.48e-15!3;UBERON:0006331!8.76e-15!3;UBERON:0000477!1.82e-14!286;UBERON:0002680!4.93e-13!9;UBERON:0001895!4.93e-13!9;UBERON:0010092!4.93e-13!9;UBERON:0000483!1.20e-12!309;UBERON:0000119!1.89e-12!312;UBERON:0000064!4.66e-11!219;UBERON:0001897!9.41e-11!2;UBERON:0002148!9.41e-11!2;UBERON:0009662!9.41e-11!2;UBERON:0001873!1.38e-10!2;UBERON:0010122!1.38e-10!2;UBERON:0000475!2.01e-10!365;UBERON:0001871!3.74e-09!7;UBERON:0000349!8.54e-09!5;UBERON:0006947!1.11e-07!3;UBERON:0004054!1.11e-07!3;UBERON:0000200!2.59e-07!6;UBERON:0000481!2.60e-07!347;UBERON:0002771!4.82e-07!3;UBERON:0000062!5.55e-07!511 | |ontology_enrichment_uberon=UBERON:0001049!1.84e-60!57;UBERON:0005068!1.84e-60!57;UBERON:0006241!1.84e-60!57;UBERON:0007135!1.84e-60!57;UBERON:0007023!1.83e-56!115;UBERON:0002616!7.08e-54!59;UBERON:0000955!4.08e-48!69;UBERON:0006238!4.08e-48!69;UBERON:0005743!1.38e-46!86;UBERON:0001017!6.56e-46!82;UBERON:0003075!5.85e-44!86;UBERON:0007284!5.85e-44!86;UBERON:0002346!1.01e-41!90;UBERON:0000073!1.32e-41!94;UBERON:0001016!1.32e-41!94;UBERON:0002780!1.73e-38!41;UBERON:0001890!1.73e-38!41;UBERON:0006240!1.73e-38!41;UBERON:0003080!1.75e-37!42;UBERON:0002020!1.07e-33!34;UBERON:0003528!1.07e-33!34;UBERON:0001893!3.29e-33!34;UBERON:0002791!2.78e-30!33;UBERON:0000153!3.95e-29!129;UBERON:0007811!3.95e-29!129;UBERON:0002298!1.73e-28!8;UBERON:0001869!2.01e-27!32;UBERON:0003056!2.93e-27!61;UBERON:0000033!1.99e-26!123;UBERON:0002308!1.21e-24!9;UBERON:0000125!1.21e-24!9;UBERON:0003076!1.76e-24!15;UBERON:0003057!1.76e-24!15;UBERON:0004733!1.80e-24!12;UBERON:0002028!1.80e-24!12;UBERON:0007277!1.80e-24!12;UBERON:0004732!1.73e-22!13;UBERON:0004121!2.30e-20!169;UBERON:0000924!9.68e-20!173;UBERON:0006601!9.68e-20!173;UBERON:0000369!6.29e-19!4;UBERON:0002435!6.29e-19!4;UBERON:0000204!6.29e-19!4;UBERON:0010082!6.29e-19!4;UBERON:0002420!6.80e-18!9;UBERON:0007245!6.80e-18!9;UBERON:0010009!6.80e-18!9;UBERON:0010011!6.80e-18!9;UBERON:0000454!6.80e-18!9;UBERON:0002619!1.17e-17!22;UBERON:0000025!3.79e-17!194;UBERON:0009663!2.46e-16!7;UBERON:0004111!5.75e-16!241;UBERON:0001950!1.20e-15!20;UBERON:0001896!1.84e-15!3;UBERON:0005290!1.84e-15!3;UBERON:0010096!1.84e-15!3;UBERON:0000956!2.10e-15!25;UBERON:0000203!2.10e-15!25;UBERON:0000988!5.48e-15!3;UBERON:0005383!5.48e-15!3;UBERON:0005382!5.48e-15!3;UBERON:0006331!8.76e-15!3;UBERON:0000477!1.82e-14!286;UBERON:0002680!4.93e-13!9;UBERON:0001895!4.93e-13!9;UBERON:0010092!4.93e-13!9;UBERON:0000483!1.20e-12!309;UBERON:0000119!1.89e-12!312;UBERON:0000064!4.66e-11!219;UBERON:0001897!9.41e-11!2;UBERON:0002148!9.41e-11!2;UBERON:0009662!9.41e-11!2;UBERON:0001873!1.38e-10!2;UBERON:0010122!1.38e-10!2;UBERON:0000475!2.01e-10!365;UBERON:0001871!3.74e-09!7;UBERON:0000349!8.54e-09!5;UBERON:0006947!1.11e-07!3;UBERON:0004054!1.11e-07!3;UBERON:0000200!2.59e-07!6;UBERON:0000481!2.60e-07!347;UBERON:0002771!4.82e-07!3;UBERON:0000062!5.55e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.28e-53;3!UBERON:0004054;1.28e-53;3!UBERON:0001896;4.89e-53;3!UBERON:0005290;4.89e-53;3!UBERON:0000998;6.62e-41;1!UBERON:0006868;6.62e-41;1!UBERON:0001000;9.91e-41;1!UBERON:0005352;9.91e-41;1!UBERON:0005904;1.48e-40;4!UBERON:0002298;3.55e-27;6!UBERON:0002370;5.69e-21;2!UBERON:0005058;5.69e-21;2!UBERON:0009113;5.69e-21;2!UBERON:0000058;5.90e-17;10!UBERON:0003135;1.62e-15;11!UBERON:0004733;3.59e-14;12!UBERON:0002028;3.59e-14;12!UBERON:0004732;3.64e-13;13!UBERON:0004177;3.22e-09;5!UBERON:0005057;3.22e-09;5!UBERON:0004175;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.28e-53,3;UBERON:0004054,1.28e-53,3;UBERON:0001896,4.89e-53,3;UBERON:0005290,4.89e-53,3;UBERON:0010096,4.89e-53,3;UBERON:0000998,6.62e-41,1;UBERON:0006868,6.62e-41,1;UBERON:0001000,9.91e-41,1;UBERON:0005352,9.91e-41,1;UBERON:0005904,1.48e-40,4;UBERON:0002298,3.55e-27,6;UBERON:0003135,1.62e-15,11;UBERON:0004733,3.59e-14,12;UBERON:0002028,3.59e-14,12;UBERON:0007277,3.59e-14,12;UBERON:0004732,3.64e-13,13;UBERON:0003076,1.50e-11,15;UBERON:0003057,1.50e-11,15;UBERON:0002370,3.42e-11,4;UBERON:0005058,3.42e-11,4;UBERON:0009113,3.42e-11,4;UBERON:0003295,3.42e-11,4;UBERON:0005562,3.42e-11,4;UBERON:0000058,1.99e-09,19;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003351,6.78e-08,6;UBERON:0004175,2.14e-07,25;UBERON:0004177,6.04e-07,7;UBERON:0005057,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.774054819518572,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,4.3404284313433,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.52893040697076,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,1.14681839138014,1.55300672151593,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.339848664884159,0,0,0,0.156986185701028,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,6.35080575286394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.620597975171371,0,0,0.775066918032073,1.42771842880473,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.774054819518572,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,4.3404284313433,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.52893040697076,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,1.14681839138014,1.55300672151593,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.339848664884159,0,0,0,0.156986185701028,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,6.35080575286394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.620597975171371,0,0,0.775066918032073,1.42771842880473,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@BMPR1B | |short_description=p17@BMPR1B | ||
}} | }} |
Latest revision as of 10:48, 19 September 2015
Short description: | p17@BMPR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_BMPR1B_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 16bp_to_ENST00000502683_5end |
EntrezGene: | BMPR1B |
HGNC: | 1077 |
UniProt: | D6RAW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.28e-53 | 3 |
internal male genitalia | 1.28e-53 | 3 |
medulla oblongata | 4.89e-53 | 3 |
myelencephalon | 4.89e-53 | 3 |
future myelencephalon | 4.89e-53 | 3 |
seminal vesicle | 6.62e-41 | 1 |
seminal fluid secreting gland | 6.62e-41 | 1 |
vas deferens | 9.91e-41 | 1 |
spermatic cord | 9.91e-41 | 1 |
duct of male reproductive system | 1.48e-40 | 4 |
brainstem | 3.55e-27 | 6 |
male reproductive organ | 1.62e-15 | 11 |
segmental subdivision of hindbrain | 3.59e-14 | 12 |
hindbrain | 3.59e-14 | 12 |
presumptive hindbrain | 3.59e-14 | 12 |
segmental subdivision of nervous system | 3.64e-13 | 13 |
posterior neural tube | 1.50e-11 | 15 |
chordal neural plate | 1.50e-11 | 15 |
thymus | 3.42e-11 | 4 |
hemolymphoid system gland | 3.42e-11 | 4 |
thymic region | 3.42e-11 | 4 |
pharyngeal gland | 3.42e-11 | 4 |
thymus primordium | 3.42e-11 | 4 |
duct | 1.99e-09 | 19 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
pharyngeal epithelium | 6.78e-08 | 6 |
internal genitalia | 2.14e-07 | 25 |
hemopoietic organ | 6.04e-07 | 7 |
immune organ | 6.04e-07 | 7 |