FFCP PHASE1:Hg19::chr18:34408902..34409022,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:34408902..34409022,-
|short_description=p2@TPGS2
|description=CAGE_peak_2_at_TPGS2_5end
|association_with_transcript=0bp_to_ENST00000383056_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25941 | |EntrezGene=25941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24561 | |HGNC=24561 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000383056_5end | |||
|cluster_id=chr18:34408902..34409022,- | |||
|description=CAGE_peak_2_at_TPGS2_5end | |||
|id=chr18:34408902..34409022,- | |||
|ontology_enrichment_celltype=CL:0000055!5.80e-25!180;CL:0000222!1.56e-22!119;CL:0000220!1.09e-20!246;CL:0002321!2.88e-20!248;CL:0002078!2.35e-14!44;CL:0000183!3.03e-14!59;CL:0000680!7.02e-14!57;CL:0000056!7.02e-14!57;CL:0000355!7.02e-14!57;CL:0000393!2.53e-13!60;CL:0000211!2.53e-13!60;CL:0000187!3.48e-13!54;CL:0002371!3.01e-12!591;CL:0000115!5.80e-12!35;CL:0000192!6.64e-12!42;CL:0000514!6.64e-12!42;CL:0002139!4.82e-11!24;CL:0000144!1.32e-10!625;CL:0000071!2.17e-10!18;CL:0002546!2.17e-10!18;CL:0000359!1.11e-09!32;CL:0000057!8.13e-09!75;CL:0000213!1.28e-08!57;CL:0000215!1.28e-08!57;CL:0000548!1.04e-07!679;CL:0000004!1.04e-07!679;CL:0000255!1.04e-07!679;CL:1000449!1.90e-07!16;CL:0000012!4.28e-07!682;CL:1000497!6.27e-07!18;CL:0002518!6.27e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.24e-11;24!CL:0000115;1.96e-10;36!CL:0000071;2.31e-10;18!CL:0002078;8.07e-10;45!CL:0000359;4.14e-09;32!CL:1000449;2.09e-08;15!CL:0000192;3.89e-08;43!CL:0000187;6.39e-08;55!CL:1000497;9.57e-08;17!CL:0002518;9.57e-08;17!CL:0002681;5.23e-07;12!CL:0002584;5.23e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.96e-22,121;CL:0002321,2.58e-20,250;CL:0002078,9.15e-15,45;CL:0000680,2.62e-13,58;CL:0000056,2.62e-13,58;CL:0000355,2.62e-13,58;CL:0000393,8.70e-13,61;CL:0000211,8.70e-13,61;CL:0000187,1.29e-12,55;CL:0000115,2.28e-12,36;CL:0000192,2.78e-11,43;CL:0000514,2.78e-11,43;CL:0002139,4.82e-11,24;CL:0000071,2.17e-10,18;CL:0002546,2.17e-10,18;CL:0000359,1.11e-09,32;CL:0000057,4.23e-09,76;CL:0000213,5.89e-09,58;CL:0000215,5.89e-09,58;CL:1000449,2.28e-08,15;CL:1000497,1.02e-07,17;CL:0002518,1.02e-07,17;CL:0002681,5.74e-07,12;CL:0002584,5.74e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;2.31e-10;18!CL:0000514;3.89e-08;43!CL:0000355;1.48e-07;58!CL:0000222;5.85e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!7.64e-21!312;UBERON:0000483!1.59e-20!309;UBERON:0002049!1.86e-17!79;UBERON:0007798!1.86e-17!79;UBERON:0005256!6.65e-17!143;UBERON:0000914!6.95e-17!83;UBERON:0002329!6.95e-17!83;UBERON:0003077!6.95e-17!83;UBERON:0003059!6.95e-17!83;UBERON:0007282!6.95e-17!83;UBERON:0009618!6.95e-17!83;UBERON:0007285!6.95e-17!83;UBERON:0000486!1.57e-16!82;UBERON:0000055!1.80e-16!69;UBERON:0004535!2.90e-16!110;UBERON:0001009!2.27e-15!113;UBERON:0001981!4.98e-15!60;UBERON:0007500!4.98e-15!60;UBERON:0004537!4.98e-15!60;UBERON:0006965!4.98e-15!60;UBERON:0000475!2.56e-14!365;UBERON:0004290!2.88e-14!70;UBERON:0004872!3.69e-14!84;UBERON:0003914!1.01e-13!118;UBERON:0002100!1.53e-12!216;UBERON:0000490!3.34e-12!138;UBERON:0001637!9.80e-12!42;UBERON:0003509!9.80e-12!42;UBERON:0004572!9.80e-12!42;UBERON:0001134!2.56e-11!61;UBERON:0002036!2.56e-11!61;UBERON:0003082!2.56e-11!61;UBERON:0002385!1.77e-10!63;UBERON:0001015!1.77e-10!63;UBERON:0000383!1.77e-10!63;UBERON:0001986!2.17e-10!18;UBERON:0004638!2.17e-10!18;UBERON:0004852!2.17e-10!18;UBERON:0000477!3.72e-10!286;UBERON:0000025!2.21e-09!194;UBERON:0004111!4.71e-09!241;UBERON:0006914!6.02e-09!25;UBERON:0000487!8.53e-09!22;UBERON:0000481!1.49e-08!347;UBERON:0004573!4.34e-08!33;UBERON:0004571!4.34e-08!33;UBERON:0000468!7.27e-08!659;UBERON:0000467!8.40e-08!625;UBERON:0000480!1.05e-07!626;UBERON:0000353!1.45e-07!17;UBERON:0004211!1.90e-07!16;UBERON:0001285!1.90e-07!16;UBERON:0007684!1.90e-07!16;UBERON:0003220!1.90e-07!16;UBERON:0004208!1.90e-07!16;UBERON:0001851!4.14e-07!16;UBERON:0003104!7.17e-07!238;UBERON:0009142!7.17e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.31e-10;18!UBERON:0001986;2.31e-10;18!UBERON:0004852;2.31e-10;18!UBERON:0003914;3.96e-10;74!UBERON:0007500;1.11e-09;56!UBERON:0001981;1.11e-09;56!UBERON:0004537;1.11e-09;56!UBERON:0006914;6.74e-09;25!UBERON:0000055;9.72e-09;65!UBERON:0000487;9.96e-09;22!UBERON:0006555;2.09e-08;15!UBERON:0004819;2.09e-08;15!UBERON:0001285;2.09e-08;15!UBERON:0007684;2.09e-08;15!UBERON:0001637;2.96e-08;42!UBERON:0003509;2.96e-08;42!UBERON:0004572;2.96e-08;42!UBERON:0000353;3.84e-08;15!UBERON:0001851;4.79e-08;15!UBERON:0002049;1.50e-07;75!UBERON:0007798;1.50e-07;75!UBERON:0004573;2.25e-07;33!UBERON:0004571;2.25e-07;33!UBERON:0001225;5.23e-07;12!UBERON:0008987;5.23e-07;12!UBERON:0006554;9.25e-07;30!UBERON:0001008;9.25e-07;30 | |||
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| ||
|short_description=p2@TPGS2 | |||
}} | }} |
Latest revision as of 09:50, 19 September 2015
Short description: | p2@TPGS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TPGS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000383056_5end |
EntrezGene: | TPGS2 |
HGNC: | 24561 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.96e-22 | 121 |
embryonic cell | 2.58e-20 | 250 |
meso-epithelial cell | 9.15e-15 | 45 |
muscle precursor cell | 2.62e-13 | 58 |
myoblast | 2.62e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.62e-13 | 58 |
electrically responsive cell | 8.70e-13 | 61 |
electrically active cell | 8.70e-13 | 61 |
muscle cell | 1.29e-12 | 55 |
endothelial cell | 2.28e-12 | 36 |
smooth muscle cell | 2.78e-11 | 43 |
smooth muscle myoblast | 2.78e-11 | 43 |
endothelial cell of vascular tree | 4.82e-11 | 24 |
blood vessel endothelial cell | 2.17e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.17e-10 | 18 |
vascular associated smooth muscle cell | 1.11e-09 | 32 |
fibroblast | 4.23e-09 | 76 |
lining cell | 5.89e-09 | 58 |
barrier cell | 5.89e-09 | 58 |
epithelial cell of nephron | 2.28e-08 | 15 |
kidney cell | 1.02e-07 | 17 |
kidney epithelial cell | 1.02e-07 | 17 |
kidney cortical cell | 5.74e-07 | 12 |
renal cortical epithelial cell | 5.74e-07 | 12 |