FFCP PHASE1:Hg19::chr6:56112289..56112311,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr6:56112289..56112311,- to FFCP PHASE1:Hg19::chr6:56112289..56112311,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81578 | |EntrezGene=81578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17025 | |HGNC=17025 | ||
|TSSclassifier=strong | |||
|UniProt=A6PVD9 | |UniProt=A6PVD9 | ||
|association_with_transcript=-54bp_to_ENST00000370817_5end | |||
|cluster_id=chr6:56112289..56112311,- | |||
|coexpression_cluster_id=C4618 | |||
|description=CAGE_peak_4_at_COL21A1_5end | |||
|id=chr6:56112289..56112311,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002564;5.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,8.30e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.18e-07;3!UBERON:0003057;1.18e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.10e-35!115;UBERON:0002616!6.20e-27!59;UBERON:0001017!1.35e-25!82;UBERON:0001049!1.98e-25!57;UBERON:0005068!1.98e-25!57;UBERON:0006241!1.98e-25!57;UBERON:0007135!1.98e-25!57;UBERON:0005743!1.04e-24!86;UBERON:0000955!2.97e-23!69;UBERON:0006238!2.97e-23!69;UBERON:0000073!6.41e-22!94;UBERON:0001016!6.41e-22!94;UBERON:0002346!1.59e-19!90;UBERON:0003075!1.67e-19!86;UBERON:0007284!1.67e-19!86;UBERON:0003080!9.51e-19!42;UBERON:0000153!1.18e-18!129;UBERON:0007811!1.18e-18!129;UBERON:0000033!3.78e-18!123;UBERON:0002780!4.26e-18!41;UBERON:0001890!4.26e-18!41;UBERON:0006240!4.26e-18!41;UBERON:0000924!4.27e-15!173;UBERON:0006601!4.27e-15!173;UBERON:0004121!7.54e-15!169;UBERON:0002020!1.52e-13!34;UBERON:0003528!1.52e-13!34;UBERON:0001893!2.20e-13!34;UBERON:0003056!2.37e-13!61;UBERON:0002791!5.11e-13!33;UBERON:0001869!6.54e-12!32;UBERON:0000475!2.80e-10!365;UBERON:0000481!5.95e-10!347;UBERON:0000477!9.85e-10!286;UBERON:0000468!3.21e-09!659;UBERON:0000922!1.91e-08!612;UBERON:0000956!3.06e-08!25;UBERON:0000203!3.06e-08!25;UBERON:0002619!4.23e-08!22;UBERON:0002298!4.50e-08!8;UBERON:0001950!6.68e-08!20;UBERON:0003076!7.30e-08!15;UBERON:0003057!7.30e-08!15;UBERON:0002308!2.19e-07!9;UBERON:0000125!2.19e-07!9;UBERON:0000483!4.34e-07!309;UBERON:0000119!4.70e-07!312;UBERON:0002050!5.72e-07!605;UBERON:0005423!5.72e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.39e-12;5!UBERON:0002216;1.39e-12;5!UBERON:0011134;1.39e-12;5!UBERON:0002209;1.39e-12;5!UBERON:0002213;1.39e-12;5!UBERON:0007844;1.39e-12;5!UBERON:0011138;1.39e-12;5!UBERON:0001130;1.39e-12;5!UBERON:0001066;1.39e-12;5!UBERON:0001468;1.39e-12;5!UBERON:0005284;1.03e-08;5!UBERON:0001896;1.61e-08;3!UBERON:0005290;1.61e-08;3!UBERON:0000073;3.91e-08;53!UBERON:0002616;3.91e-08;53!UBERON:0001017;4.50e-08;75!UBERON:0002242;5.78e-08;3!UBERON:0004905;1.02e-07;8!UBERON:0000982;1.02e-07;8!UBERON:0004770;1.02e-07;8!UBERON:0002240;1.18e-07;3!UBERON:0005174;1.18e-07;3!UBERON:0001137;1.18e-07;3!UBERON:0002780;4.05e-07;41!UBERON:0001890;4.05e-07;41!UBERON:0002298;5.41e-07;6!UBERON:0000922;7.32e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.16e-19,114;UBERON:0001049,2.80e-16,56;UBERON:0005068,2.80e-16,56;UBERON:0006241,2.80e-16,56;UBERON:0007135,2.80e-16,56;UBERON:0001017,1.42e-15,81;UBERON:0003075,4.75e-14,82;UBERON:0007284,4.75e-14,82;UBERON:0000955,9.11e-14,68;UBERON:0006238,9.11e-14,68;UBERON:0001016,2.44e-13,89;UBERON:0002346,4.37e-13,86;UBERON:0011216,9.54e-13,223;UBERON:0000073,1.17e-12,53;UBERON:0002616,1.17e-12,53;UBERON:0011135,2.33e-12,5;UBERON:0002216,2.33e-12,5;UBERON:0011134,2.33e-12,5;UBERON:0002209,2.33e-12,5;UBERON:0002213,2.33e-12,5;UBERON:0005856,2.33e-12,5;UBERON:0005866,2.33e-12,5;UBERON:0005863,2.33e-12,5;UBERON:0007844,2.33e-12,5;UBERON:0011138,2.33e-12,5;UBERON:0001130,2.33e-12,5;UBERON:0001066,2.33e-12,5;UBERON:0001468,2.33e-12,5;UBERON:0010314,2.61e-12,132;UBERON:0010371,9.62e-11,104;UBERON:0003076,2.92e-09,15;UBERON:0003057,2.92e-09,15;UBERON:0002780,3.03e-09,41;UBERON:0001890,3.03e-09,41;UBERON:0003080,3.03e-09,41;UBERON:0006240,3.03e-09,41;UBERON:0004121,6.64e-09,171;UBERON:0000924,6.64e-09,171;UBERON:0006601,6.64e-09,171;UBERON:0005284,6.73e-09,5;UBERON:0001896,2.34e-08,3;UBERON:0005290,2.34e-08,3;UBERON:0010096,2.34e-08,3;UBERON:0002050,2.46e-08,564;UBERON:0000922,2.64e-08,592;UBERON:0005423,3.79e-08,581;UBERON:0002240,5.21e-08,3;UBERON:0005174,5.21e-08,3;UBERON:0001137,5.21e-08,3;UBERON:0000923,6.22e-08,560;UBERON:0010316,6.22e-08,560;UBERON:0005291,6.22e-08,560;UBERON:0006598,6.22e-08,560;UBERON:0010317,6.22e-08,560;UBERON:0002532,6.22e-08,560;UBERON:0002242,8.30e-08,3;UBERON:0003068,8.30e-08,3;UBERON:0002328,8.30e-08,3;UBERON:0004880,8.30e-08,3;UBERON:0004905,1.39e-07,8;UBERON:0000982,1.39e-07,8;UBERON:0004770,1.39e-07,8;UBERON:0000483,2.72e-07,306;UBERON:0000119,4.07e-07,309;UBERON:0002298,6.64e-07,6;UBERON:0004111,7.17e-07,240 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,1.26343974685366,0.261185628199839,0,0,0,0.263766978228454,2.59909341216098,2.31978163009541,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0.383587685530591,0,0,0.434539556882471,0.795285947051099,0,0.378139268656271,0,0.175669571386252,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,6.02356903572509,0.354668382198357,0,0,0,3.7345324247972,0.269421344139376,0.163461903113459,2.8757911252537,12.09969441408,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0,0.204154171254893,0,1.96318984233954,0,0,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,1.13152239773168,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,1.02738161275192,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,2.94459580125936,1.00034104211935,1.35632511849868,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0.664225598535437,0.737476674166813,0.434418072340414,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.676695028044854,0.154048617114644,0.307007349452259,0,3.33002759091648,1.45016693914229,0.170453254832202,3.38321735457602,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,2.97726695487734,1.58189712359363,0.190630193923825,0,1.71175595213568,0,0,1.07923474549989,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.984685914873589,0.111308705022906,0,0.211125408127993,12.9511192363195,0.276283915531148,0,0,0,0,0,0,0,1.57829449019094,0,0,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0,0.254253650292766,0,0.344743373241465,0,0.173624994933292,2.65722415744152,0.120596438625408,0,1.21637185924347,0.591095237907095,0.658156191461918,0,0,4.07836370070124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,1.68502832451693,4.01288823649394,0.702793337176017,0,0,0,1.57833761139756,3.62972148145992,0.30607276163049,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.581934098930517,0,0.677942222341597,0,0,0.949661939338181,0,0,0.640358984218058,0,0,0,0.514784993585894,0,0,0,0,0,0,0.577901179803038,1.20084057741958,0.684526894459965,0,0,0,2.79282401272254,4.58320848023367,0,0.399358000997982,0,0,4.63565960158411,0,0,0,0,0,0,0,0,2.86027152834309,0.160753148465019,0.412618309791701,0.83088067605837,0,0.77380195455795,0.546746009922222,0,0.315222829196793,1.52118305591495,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.775697738169303,0.92562821219883,0,0,0.747511887973863,3.14408610199332,2.07119527673598,0.496166021811951,0,0,1.27668251554036,0,0,0,0,0,0.886068179966986,1.09823638411767,0.876336514945499,5.16068276121064,2.44043913381075,1.1177352529449,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,0,0.568209015825267,0.754703705257725,2.66943366478961,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0.848662649770126,0,0.123935764259002,0,0,0,0,1.05802783107205,0.3062454773532,0.385375350578757,0,1.11743701340006,1.02558182120378,0,0.276629009856872,1.93770774758221,0,0,0,0.183428598521679,0,0,0,0,0.376051641746286,0,0,0,0,0,0.202612753855184,0,1.65349437200947,0.380494861163441,0,0,2.97726707033577,0,0,1.07140367175657,0.336283722218824,1.21393120847326,0.455324382702595,0.620916591138472,0,8.91737649074576,1.42736439251347,0.394636641377094,0,0.444925607568277,1.56986185701028,0.471346769748006,0,22.8289680127374,0,0,1.57248397188644,0,0,0.869291361512897,0,0.414432328326074,0.17071847709395,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0,15.0775876073966,4.37139893753226,0,0,0.237840181555137,0,0,0,0.463044948647668,1.74847648403166,0,7.10930133086326,0,1.76677620403451,1.78227840196252,1.2679671827502,0,0.09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| ||
|short_description=p4@COL21A1 | |||
}} | }} |
Latest revision as of 08:42, 19 September 2015
Short description: | p4@COL21A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL21A1_5end |
Coexpression cluster: | C4618_rectum_skeletal_Fibroblast_aorta_skin_throat_pleomorphic |
Association with transcript: | -54bp_to_ENST00000370817_5end |
EntrezGene: | COL21A1 |
HGNC: | 17025 |
UniProt: | A6PVD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 8.30e-08 | 3 |