FFCP PHASE1:Hg19::chr3:63263953..63264016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=132204 | |EntrezGene=132204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16507 | |HGNC=16507 | ||
|TSSclassifier=strong | |||
|UniProt=F8WE43,F8WF23 | |UniProt=F8WE43,F8WF23 | ||
|association_with_transcript=0bp_to_ENST00000450542,ENST00000468110_5end | |association_with_transcript=0bp_to_ENST00000450542,ENST00000468110_5end | ||
|cluster_id=chr3:63263953..63264016,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_SYNPR_5end | |description=CAGE_peak_1_at_SYNPR_5end | ||
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|ontology_enrichment_celltype=CL:0000047!2.50e-12!8;CL:0000540!2.34e-09!6;CL:0000031!2.34e-09!6;CL:0000404!2.34e-09!6;CL:0000133!1.09e-08!59;CL:0002322!2.52e-08!5 | |ontology_enrichment_celltype=CL:0000047!2.50e-12!8;CL:0000540!2.34e-09!6;CL:0000031!2.34e-09!6;CL:0000404!2.34e-09!6;CL:0000133!1.09e-08!59;CL:0002322!2.52e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.12e-07;5 | |ontology_enrichment_celltype_v019=CL:0002322;3.12e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.78e-09,8;CL:0002322,3.35e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.26e-18;82!UBERON:0006215;3.50e-09;3!UBERON:0006241;1.67e-07;3!UBERON:0003057;1.67e-07;3 | |ontology_enrichment_development_v019=UBERON:0006601;2.26e-18;82!UBERON:0006215;3.50e-09;3!UBERON:0006241;1.67e-07;3!UBERON:0003057;1.67e-07;3 | ||
|ontology_enrichment_disease=DOID:3095!1.16e-12!22;DOID:2994!1.16e-12!22;DOID:171!9.05e-10!10 | |ontology_enrichment_disease=DOID:3095!1.16e-12!22;DOID:2994!1.16e-12!22;DOID:171!9.05e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:171;1.04e-07;10 | |ontology_enrichment_disease_v019=DOID:171;1.04e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,9.23e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.07e-76!94;UBERON:0001016!2.07e-76!94;UBERON:0001017!5.59e-75!82;UBERON:0005743!1.72e-73!86;UBERON:0001049!4.75e-69!57;UBERON:0005068!4.75e-69!57;UBERON:0006241!4.75e-69!57;UBERON:0007135!4.75e-69!57;UBERON:0002346!9.82e-61!90;UBERON:0002616!1.08e-57!59;UBERON:0002780!3.85e-56!41;UBERON:0001890!3.85e-56!41;UBERON:0006240!3.85e-56!41;UBERON:0000955!3.95e-56!69;UBERON:0006238!3.95e-56!69;UBERON:0003075!5.16e-55!86;UBERON:0007284!5.16e-55!86;UBERON:0003080!1.59e-54!42;UBERON:0001869!1.59e-49!32;UBERON:0001893!3.40e-49!34;UBERON:0002020!9.02e-49!34;UBERON:0003528!9.02e-49!34;UBERON:0000924!1.67e-47!173;UBERON:0006601!1.67e-47!173;UBERON:0002791!2.15e-47!33;UBERON:0003056!1.04e-44!61;UBERON:0004121!5.81e-43!169;UBERON:0007023!7.56e-43!115;UBERON:0002619!1.24e-40!22;UBERON:0000956!7.46e-38!25;UBERON:0000203!7.46e-38!25;UBERON:0001950!4.95e-37!20;UBERON:0000033!7.31e-36!123;UBERON:0000153!2.25e-33!129;UBERON:0007811!2.25e-33!129;UBERON:0003076!3.94e-15!15;UBERON:0003057!3.94e-15!15;UBERON:0001871!1.10e-14!7;UBERON:0000025!5.13e-13!194;UBERON:0002420!7.70e-13!9;UBERON:0007245!7.70e-13!9;UBERON:0010009!7.70e-13!9;UBERON:0010011!7.70e-13!9;UBERON:0000454!7.70e-13!9;UBERON:0004732!2.08e-12!13;UBERON:0002308!3.36e-12!9;UBERON:0000125!3.36e-12!9;UBERON:0000200!5.54e-12!6;UBERON:0000922!1.28e-11!612;UBERON:0004733!5.19e-11!12;UBERON:0002028!5.19e-11!12;UBERON:0007277!5.19e-11!12;UBERON:0000349!2.43e-10!5;UBERON:0002021!4.63e-10!5;UBERON:0001872!4.72e-10!5;UBERON:0009663!1.65e-09!7;UBERON:0002680!2.53e-09!9;UBERON:0001895!2.53e-09!9;UBERON:0010092!2.53e-09!9;UBERON:0004111!2.87e-09!241;UBERON:0000468!9.07e-09!659;UBERON:0000064!1.04e-08!219;UBERON:0002050!1.23e-08!605;UBERON:0005423!1.23e-08!605;UBERON:0000477!2.48e-08!286;UBERON:0001894!2.50e-08!7;UBERON:0006222!2.50e-08!7;UBERON:0000369!3.30e-08!4;UBERON:0002435!3.30e-08!4;UBERON:0000204!3.30e-08!4;UBERON:0010082!3.30e-08!4;UBERON:0000923!3.33e-08!604;UBERON:0005291!3.33e-08!604;UBERON:0006598!3.33e-08!604;UBERON:0002532!3.33e-08!604;UBERON:0000483!3.36e-07!309;UBERON:0000119!5.44e-07!312 | |ontology_enrichment_uberon=UBERON:0000073!2.07e-76!94;UBERON:0001016!2.07e-76!94;UBERON:0001017!5.59e-75!82;UBERON:0005743!1.72e-73!86;UBERON:0001049!4.75e-69!57;UBERON:0005068!4.75e-69!57;UBERON:0006241!4.75e-69!57;UBERON:0007135!4.75e-69!57;UBERON:0002346!9.82e-61!90;UBERON:0002616!1.08e-57!59;UBERON:0002780!3.85e-56!41;UBERON:0001890!3.85e-56!41;UBERON:0006240!3.85e-56!41;UBERON:0000955!3.95e-56!69;UBERON:0006238!3.95e-56!69;UBERON:0003075!5.16e-55!86;UBERON:0007284!5.16e-55!86;UBERON:0003080!1.59e-54!42;UBERON:0001869!1.59e-49!32;UBERON:0001893!3.40e-49!34;UBERON:0002020!9.02e-49!34;UBERON:0003528!9.02e-49!34;UBERON:0000924!1.67e-47!173;UBERON:0006601!1.67e-47!173;UBERON:0002791!2.15e-47!33;UBERON:0003056!1.04e-44!61;UBERON:0004121!5.81e-43!169;UBERON:0007023!7.56e-43!115;UBERON:0002619!1.24e-40!22;UBERON:0000956!7.46e-38!25;UBERON:0000203!7.46e-38!25;UBERON:0001950!4.95e-37!20;UBERON:0000033!7.31e-36!123;UBERON:0000153!2.25e-33!129;UBERON:0007811!2.25e-33!129;UBERON:0003076!3.94e-15!15;UBERON:0003057!3.94e-15!15;UBERON:0001871!1.10e-14!7;UBERON:0000025!5.13e-13!194;UBERON:0002420!7.70e-13!9;UBERON:0007245!7.70e-13!9;UBERON:0010009!7.70e-13!9;UBERON:0010011!7.70e-13!9;UBERON:0000454!7.70e-13!9;UBERON:0004732!2.08e-12!13;UBERON:0002308!3.36e-12!9;UBERON:0000125!3.36e-12!9;UBERON:0000200!5.54e-12!6;UBERON:0000922!1.28e-11!612;UBERON:0004733!5.19e-11!12;UBERON:0002028!5.19e-11!12;UBERON:0007277!5.19e-11!12;UBERON:0000349!2.43e-10!5;UBERON:0002021!4.63e-10!5;UBERON:0001872!4.72e-10!5;UBERON:0009663!1.65e-09!7;UBERON:0002680!2.53e-09!9;UBERON:0001895!2.53e-09!9;UBERON:0010092!2.53e-09!9;UBERON:0004111!2.87e-09!241;UBERON:0000468!9.07e-09!659;UBERON:0000064!1.04e-08!219;UBERON:0002050!1.23e-08!605;UBERON:0005423!1.23e-08!605;UBERON:0000477!2.48e-08!286;UBERON:0001894!2.50e-08!7;UBERON:0006222!2.50e-08!7;UBERON:0000369!3.30e-08!4;UBERON:0002435!3.30e-08!4;UBERON:0000204!3.30e-08!4;UBERON:0010082!3.30e-08!4;UBERON:0000923!3.33e-08!604;UBERON:0005291!3.33e-08!604;UBERON:0006598!3.33e-08!604;UBERON:0002532!3.33e-08!604;UBERON:0000483!3.36e-07!309;UBERON:0000119!5.44e-07!312 | ||
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|short_description=p1@SYNPR | |short_description=p1@SYNPR | ||
}} | }} |
Latest revision as of 08:30, 19 September 2015
Short description: | p1@SYNPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYNPR_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000450542, ENST00000468110_5end |
EntrezGene: | SYNPR |
HGNC: | 16507 |
UniProt: | F8WE43F8WF23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.78e-09 | 8 |
embryonic stem cell | 3.35e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.23e-08 | 10 |