FFCP PHASE1:Hg19::chr4:89618924..89618942,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:89618924..89618942,- to FFCP PHASE1:Hg19::chr4:89618924..89618942,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=266812 | |EntrezGene=266812 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19968 | |HGNC=19968 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3H0 | |UniProt=F5H3H0 | ||
|association_with_transcript=21bp_to_ENST00000539293_5end | |||
|cluster_id=chr4:89618924..89618942,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_NAP1L5_5end | |||
|id=chr4:89618924..89618942,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.80e-11;6!CL:0000791;8.11e-07;18!CL:0000789;8.11e-07;18!CL:0002419;8.11e-07;18!CL:0000623;9.60e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.17e-11,6;CL:0000791,7.10e-07,18;CL:0000789,7.10e-07,18;CL:0002420,7.10e-07,18;CL:0002419,7.10e-07,18;CL:0000790,7.10e-07,18;CL:0000623,9.59e-07,3;CL:0000825,9.59e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.80e-10;82!CL:0000790;8.11e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.87e-26!57;UBERON:0005068!4.87e-26!57;UBERON:0006241!4.87e-26!57;UBERON:0007135!4.87e-26!57;UBERON:0002616!2.63e-25!59;UBERON:0007023!2.81e-22!115;UBERON:0001017!4.24e-22!82;UBERON:0000073!1.77e-21!94;UBERON:0001016!1.77e-21!94;UBERON:0005743!3.03e-21!86;UBERON:0000955!3.08e-21!69;UBERON:0006238!3.08e-21!69;UBERON:0002780!3.63e-21!41;UBERON:0001890!3.63e-21!41;UBERON:0006240!3.63e-21!41;UBERON:0003080!4.13e-20!42;UBERON:0003075!2.66e-18!86;UBERON:0007284!2.66e-18!86;UBERON:0002346!2.52e-17!90;UBERON:0002020!2.93e-17!34;UBERON:0003528!2.93e-17!34;UBERON:0001893!6.47e-17!34;UBERON:0001869!2.20e-16!32;UBERON:0002791!3.16e-16!33;UBERON:0002619!2.04e-13!22;UBERON:0003056!2.35e-13!61;UBERON:0000956!1.23e-12!25;UBERON:0000203!1.23e-12!25;UBERON:0001950!2.42e-12!20;UBERON:0000153!4.23e-09!129;UBERON:0007811!4.23e-09!129;UBERON:0000033!1.36e-08!123;UBERON:0004121!1.08e-07!169;UBERON:0000025!1.12e-07!194;UBERON:0000924!1.97e-07!173;UBERON:0006601!1.97e-07!173;UBERON:0003076!3.99e-07!15;UBERON:0003057!3.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.34e-26;22!UBERON:0003528;5.11e-26;34!UBERON:0002020;5.11e-26;34!UBERON:0001869;5.84e-26;32!UBERON:0000073;7.29e-26;53!UBERON:0002616;7.29e-26;53!UBERON:0002780;1.90e-25;41!UBERON:0001890;1.90e-25;41!UBERON:0001893;5.16e-24;34!UBERON:0002791;7.79e-24;32!UBERON:0001950;9.23e-24;20!UBERON:0000956;1.44e-22;25!UBERON:0000203;1.44e-22;25!UBERON:0000955;1.15e-17;68!UBERON:0001017;2.72e-16;75!UBERON:0001016;6.09e-14;83!UBERON:0004732;2.98e-12;13!UBERON:0000200;9.47e-12;6!UBERON:0001894;1.32e-11;7!UBERON:0002298;3.00e-11;6!UBERON:0004733;3.64e-11;12!UBERON:0002028;3.64e-11;12!UBERON:0001872;9.12e-09;5!UBERON:0000125;1.05e-08;9!UBERON:0002308;1.05e-08;9!UBERON:0007023;4.78e-08;114!UBERON:0002420;8.30e-08;9!UBERON:0007245;8.30e-08;9!UBERON:0010009;8.30e-08;9!UBERON:0010011;8.30e-08;9!UBERON:0000454;8.30e-08;9!UBERON:0003296;8.34e-08;4!UBERON:0010133;8.34e-08;4!UBERON:0000349;8.60e-08;5!UBERON:0002784;3.03e-07;4!UBERON:0002680;3.52e-07;9!UBERON:0001895;3.52e-07;9!UBERON:0000988;6.57e-07;3!UBERON:0001870;8.52e-07;3 | |||
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| ||
|short_description=p3@NAP1L5 | |||
}} | }} |
Latest revision as of 08:01, 19 September 2015
Short description: | p3@NAP1L5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NAP1L5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 21bp_to_ENST00000539293_5end |
EntrezGene: | NAP1L5 |
HGNC: | 19968 |
UniProt: | F5H3H0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 6.17e-11 | 6 |
mature alpha-beta T cell | 7.10e-07 | 18 |
alpha-beta T cell | 7.10e-07 | 18 |
immature T cell | 7.10e-07 | 18 |
mature T cell | 7.10e-07 | 18 |
immature alpha-beta T cell | 7.10e-07 | 18 |
natural killer cell | 9.59e-07 | 3 |
pro-NK cell | 9.59e-07 | 3 |