FFCP PHASE1:Hg19::chr18:3219935..3219940,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8736 | |EntrezGene=8736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7613 | |HGNC=7613 | ||
|TSSclassifier=strong | |||
|UniProt=P52179,A8MX12 | |UniProt=P52179,A8MX12 | ||
|association_with_transcript=165bp_to_ENST00000261606,ENST00000356443,ENST00000400569,NM_003803,NM_019856,uc002klp.2,uc002klq.2_5end | |association_with_transcript=165bp_to_ENST00000261606,ENST00000356443,ENST00000400569,NM_003803,NM_019856,uc002klp.2,uc002klq.2_5end | ||
|cluster_id=chr18:3219935..3219940,- | |||
|coexpression_cluster_id=C618 | |||
|description=CAGE_peak_5_at_MYOM1_5end | |description=CAGE_peak_5_at_MYOM1_5end | ||
|id=chr18:3219935..3219940,- | |id=chr18:3219935..3219940,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.53e-18;4!UBERON:0007284;1.53e-18;4!UBERON:0010226;9.05e-10;1!UBERON:0010227;1.07e-09;1!UBERON:0004140;1.07e-09;1!UBERON:0004874;3.12e-09;1!UBERON:0001045;4.68e-09;1!UBERON:0006603;1.02e-08;65!UBERON:0003104;1.12e-08;31 | |||
|ontology_enrichment_disease=DOID:114!4.53e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.87e-17;2!DOID:178;3.12e-09;1!DOID:326;3.12e-09;1!DOID:3978;3.12e-09;1!DOID:3394;3.12e-09;1!DOID:5844;3.12e-09;1!DOID:1287;4.33e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.65e-17,2;DOID:178,2.77e-09,1;DOID:326,2.77e-09,1;DOID:3978,2.77e-09,1;DOID:3394,2.77e-09,1;DOID:5844,2.77e-09,1;DOID:1287,4.16e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.62e-33!115;UBERON:0004151!9.14e-13!3;UBERON:0003978!1.69e-12!3;UBERON:0009751!1.69e-12!3;UBERON:0000946!1.69e-12!3;UBERON:0002523!1.69e-12!3;UBERON:0005983!1.69e-12!3;UBERON:0002165!1.69e-12!3;UBERON:0002062!1.69e-12!3;UBERON:0007280!1.69e-12!3;UBERON:0007100!2.06e-10!27;UBERON:0003103!3.60e-09!69;UBERON:0000341!5.30e-09!2;UBERON:0001630!5.51e-09!2;UBERON:0005090!5.51e-09!2;UBERON:0002081!5.95e-09!2;UBERON:0002133!8.42e-09!2;UBERON:0003127!2.92e-08!2;UBERON:0001155!7.95e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.89e-25;25!UBERON:0004151;5.16e-25;3!UBERON:0003978;1.67e-24;3!UBERON:0000946;1.67e-24;3!UBERON:0000341;3.25e-17;2!UBERON:0005090;3.82e-17;2!UBERON:0001630;3.82e-17;2!UBERON:0002081;5.08e-17;2!UBERON:0002133;1.01e-16;2!UBERON:0000948;6.85e-13;22!UBERON:0001723;1.10e-11;3!UBERON:0001033;1.10e-11;3!UBERON:0002084;9.05e-10;1!UBERON:0002082;9.05e-10;1!UBERON:0002079;1.07e-09;1!UBERON:0002426;1.21e-09;1!UBERON:0003831;1.21e-09;1!UBERON:0003898;1.21e-09;1!UBERON:0004830;1.21e-09;1!UBERON:0003830;1.21e-09;1!UBERON:0005175;1.21e-09;1!UBERON:0001774;1.21e-09;1!UBERON:0001103;1.21e-09;1!UBERON:0002146;1.49e-09;1!UBERON:0005623;1.49e-09;1!UBERON:0007029;2.16e-09;1!UBERON:0002135;2.16e-09;1!UBERON:0000989;3.12e-09;1!UBERON:0001389;3.12e-09;1!UBERON:0000026;3.12e-09;1!UBERON:0008784;3.12e-09;1!UBERON:0006058;3.12e-09;1!UBERON:0008811;3.12e-09;1!UBERON:0003663;3.12e-09;1!UBERON:0004256;3.12e-09;1!UBERON:0004708;3.12e-09;1!UBERON:0002101;3.12e-09;1!UBERON:0004709;3.12e-09;1!UBERON:0002529;3.12e-09;1!UBERON:0010538;3.12e-09;1!UBERON:0003661;3.12e-09;1!UBERON:0010890;3.12e-09;1!UBERON:0002471;3.12e-09;1!UBERON:0001383;3.12e-09;1!UBERON:0010758;3.12e-09;1!UBERON:0010707;3.12e-09;1!UBERON:0000978;3.12e-09;1!UBERON:0002103;3.12e-09;1!UBERON:0001665;3.12e-09;1!UBERON:0003823;3.12e-09;1!UBERON:0000154;3.12e-09;1!UBERON:0010709;3.12e-09;1!UBERON:0001154;4.68e-09;1!UBERON:0002134;4.68e-09;1!UBERON:0001153;4.68e-09;1!UBERON:0009854;4.68e-09;1!UBERON:0005208;4.68e-09;1!UBERON:0004145;4.68e-09;1!UBERON:0005946;4.68e-09;1!UBERON:0005965;4.68e-09;1!UBERON:0002078;4.68e-09;1!UBERON:0001134;2.22e-08;16!UBERON:0002036;2.22e-08;16!UBERON:0001155;2.80e-08;9!UBERON:0010313;9.82e-08;10!UBERON:0000059;7.37e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,4.57e-25,3;UBERON:0003978,1.67e-24,3;UBERON:0009751,1.67e-24,3;UBERON:0000946,1.67e-24,3;UBERON:0002523,1.67e-24,3;UBERON:0005983,1.67e-24,3;UBERON:0002165,1.67e-24,3;UBERON:0002062,1.67e-24,3;UBERON:0007280,1.67e-24,3;UBERON:0007100,4.19e-23,27;UBERON:0000341,3.67e-17,2;UBERON:0005090,3.98e-17,2;UBERON:0001630,3.98e-17,2;UBERON:0002081,4.68e-17,2;UBERON:0010227,4.68e-17,2;UBERON:0002133,9.68e-17,2;UBERON:0007023,4.21e-15,114;UBERON:0003103,4.77e-15,68;UBERON:0000948,8.82e-12,24;UBERON:0005498,8.82e-12,24;UBERON:0004140,8.82e-12,24;UBERON:0009881,8.82e-12,24;UBERON:0004141,8.82e-12,24;UBERON:0003084,8.82e-12,24;UBERON:0007005,8.82e-12,24;UBERON:0004139,8.82e-12,24;UBERON:0004291,8.82e-12,24;UBERON:0001723,9.32e-12,3;UBERON:0001033,9.32e-12,3;UBERON:0010056,9.32e-12,3;UBERON:0004797,7.71e-11,7;UBERON:0002084,8.68e-10,1;UBERON:0002082,8.68e-10,1;UBERON:0010226,8.68e-10,1;UBERON:0002079,1.12e-09,1;UBERON:0002426,1.21e-09,1;UBERON:0003831,1.21e-09,1;UBERON:0003898,1.21e-09,1;UBERON:0004830,1.21e-09,1;UBERON:0003830,1.21e-09,1;UBERON:0005175,1.21e-09,1;UBERON:0001774,1.21e-09,1;UBERON:0001103,1.21e-09,1;UBERON:0010084,1.21e-09,1;UBERON:0002146,1.56e-09,1;UBERON:0005623,1.56e-09,1;UBERON:0007029,2.16e-09,1;UBERON:0002135,2.35e-09,1;UBERON:0005418,3.25e-09,1;UBERON:0001389,3.25e-09,1;UBERON:0000026,3.25e-09,1;UBERON:0008784,3.25e-09,1;UBERON:0006058,3.25e-09,1;UBERON:0003663,3.25e-09,1;UBERON:0004256,3.25e-09,1;UBERON:0004708,3.25e-09,1;UBERON:0002101,3.25e-09,1;UBERON:0004709,3.25e-09,1;UBERON:0002529,3.25e-09,1;UBERON:0010538,3.25e-09,1;UBERON:0003661,3.25e-09,1;UBERON:0010890,3.25e-09,1;UBERON:0002471,3.25e-09,1;UBERON:0001383,3.25e-09,1;UBERON:0004357,3.25e-09,1;UBERON:0004347,3.25e-09,1;UBERON:0005420,3.25e-09,1;UBERON:0005732,3.25e-09,1;UBERON:0010758,3.25e-09,1;UBERON:0010707,3.25e-09,1;UBERON:0000978,3.25e-09,1;UBERON:0002103,3.25e-09,1;UBERON:0001665,3.25e-09,1;UBERON:0003823,3.25e-09,1;UBERON:0000154,3.25e-09,1;UBERON:0010709,3.25e-09,1;UBERON:0005733,3.25e-09,1;UBERON:0005730,3.25e-09,1;UBERON:0000989,3.53e-09,1;UBERON:0008811,3.53e-09,1;UBERON:0006258,3.53e-09,1;UBERON:0005876,3.53e-09,1;UBERON:0004874,3.53e-09,1;UBERON:0002134,4.15e-09,1;UBERON:0005208,4.15e-09,1;UBERON:0005946,4.15e-09,1;UBERON:0005965,4.15e-09,1;UBERON:0002078,4.15e-09,1;UBERON:0001154,5.72e-09,1;UBERON:0001153,5.72e-09,1;UBERON:0001045,5.72e-09,1;UBERON:0001155,2.84e-08,9;UBERON:0010313,9.82e-08,10;UBERON:0002342,9.82e-08,10;UBERON:0005062,9.82e-08,10;UBERON:0000059,7.44e-07,11 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.10513566212459,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,1.22206028986725,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0.90392296312213,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,3.35138881526705,5.27068975226872,1.43574604915363,2.99518500748487,11.5891032996874,6.69514372325618,9.80878698306203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,9.29103924285377,11.9176554665778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,4.92781472909986,24.3561030581022,3.39997695141398,0,0,0,0,0,0,0.154348316215889,0,0,2.69663153929296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75731751132648,3.09483760902862,0,0,0,0.0636471582781649,0,3.9189014621453,3.76456631193809,0.336760265072938,0.143444410785353,1.33064142618405,0,0,0,0,0,0.488965776731466,0,0,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.10513566212459,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,1.22206028986725,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0.90392296312213,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,3.35138881526705,5.27068975226872,1.43574604915363,2.99518500748487,11.5891032996874,6.69514372325618,9.80878698306203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,9.29103924285377,11.9176554665778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,4.92781472909986,24.3561030581022,3.39997695141398,0,0,0,0,0,0,0.154348316215889,0,0,2.69663153929296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75731751132648,3.09483760902862,0,0,0,0.0636471582781649,0,3.9189014621453,3.76456631193809,0.336760265072938,0.143444410785353,1.33064142618405,0,0,0,0,0,0.488965776731466,0,0,0.201273793591026,0 | ||
|short_description=p5@MYOM1 | |short_description=p5@MYOM1 | ||
}} | }} |
Latest revision as of 07:26, 19 September 2015
Short description: | p5@MYOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MYOM1_5end |
Coexpression cluster: | C618_skeletal_heart_left_diaphragm_throat_skin_maxillary |
Association with transcript: | 165bp_to_ENST00000261606, ENST00000356443, ENST00000400569, NM_003803, NM_019856, uc002klp.2, uc002klq.2_5end |
EntrezGene: | MYOM1 |
HGNC: | 7613 |
UniProt: | P52179A8MX12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.65e-17 | 2 |
vascular disease | 2.77e-09 | 1 |
ischemia | 2.77e-09 | 1 |