FFCP PHASE1:Hg19::chr4:88450428..88450439,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:88450428..88450439,- to FFCP PHASE1:Hg19::chr4:88450428..88450439,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8404 | |EntrezGene=8404 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11220 | |HGNC=11220 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4Y3 | |UniProt=F5H4Y3 | ||
|association_with_transcript=-35bp_to_ENST00000543631_5end | |||
|cluster_id=chr4:88450428..88450439,- | |||
|coexpression_cluster_id=C371 | |||
|description=CAGE_peak_9_at_SPARCL1_5end | |||
|id=chr4:88450428..88450439,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.04e-17;82!UBERON:0002532;4.12e-08;206!UBERON:0010316;4.12e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.14e-109!115;UBERON:0001049!1.78e-52!57;UBERON:0005068!1.78e-52!57;UBERON:0006241!1.78e-52!57;UBERON:0007135!1.78e-52!57;UBERON:0002616!4.04e-43!59;UBERON:0003080!4.25e-42!42;UBERON:0002780!9.17e-41!41;UBERON:0001890!9.17e-41!41;UBERON:0006240!9.17e-41!41;UBERON:0003075!2.59e-40!86;UBERON:0007284!2.59e-40!86;UBERON:0000955!1.13e-37!69;UBERON:0006238!1.13e-37!69;UBERON:0002346!1.15e-37!90;UBERON:0001017!1.29e-37!82;UBERON:0005743!1.89e-36!86;UBERON:0002020!7.63e-33!34;UBERON:0003528!7.63e-33!34;UBERON:0000073!1.25e-32!94;UBERON:0001016!1.25e-32!94;UBERON:0001893!1.51e-32!34;UBERON:0002791!2.76e-31!33;UBERON:0001869!1.81e-30!32;UBERON:0003056!2.34e-26!61;UBERON:0000153!2.07e-25!129;UBERON:0007811!2.07e-25!129;UBERON:0000033!2.57e-23!123;UBERON:0002619!4.08e-23!22;UBERON:0000956!2.28e-21!25;UBERON:0000203!2.28e-21!25;UBERON:0001950!1.70e-20!20;UBERON:0004121!1.86e-19!169;UBERON:0000924!1.49e-18!173;UBERON:0006601!1.49e-18!173;UBERON:0004111!6.63e-18!241;UBERON:0000477!3.57e-16!286;UBERON:0000025!1.11e-15!194;UBERON:0002420!9.52e-14!9;UBERON:0007245!9.52e-14!9;UBERON:0010009!9.52e-14!9;UBERON:0010011!9.52e-14!9;UBERON:0000454!9.52e-14!9;UBERON:0002308!2.56e-13!9;UBERON:0000125!2.56e-13!9;UBERON:0000062!3.11e-13!511;UBERON:0003076!2.35e-11!15;UBERON:0003057!2.35e-11!15;UBERON:0000064!2.36e-11!219;UBERON:0002298!3.75e-11!8;UBERON:0009663!7.05e-11!7;UBERON:0000481!1.01e-10!347;UBERON:0000200!1.06e-09!6;UBERON:0001894!1.30e-09!7;UBERON:0006222!1.30e-09!7;UBERON:0001871!4.13e-09!7;UBERON:0000119!5.63e-09!312;UBERON:0000483!7.28e-09!309;UBERON:0004732!8.22e-09!13;UBERON:0000468!1.15e-08!659;UBERON:0000467!1.51e-08!625;UBERON:0000349!1.59e-08!5;UBERON:0000480!1.77e-08!626;UBERON:0004733!5.56e-08!12;UBERON:0002028!5.56e-08!12;UBERON:0007277!5.56e-08!12;UBERON:0000475!5.93e-08!365;UBERON:0000369!2.07e-07!4;UBERON:0002435!2.07e-07!4;UBERON:0000204!2.07e-07!4;UBERON:0010082!2.07e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.21e-32;41!UBERON:0001890;2.21e-32;41!UBERON:0001893;7.42e-31;34!UBERON:0003528;1.35e-30;34!UBERON:0002020;1.35e-30;34!UBERON:0001869;3.28e-30;32!UBERON:0002791;3.49e-30;32!UBERON:0000073;1.84e-29;53!UBERON:0002616;1.84e-29;53!UBERON:0007023;2.81e-28;114!UBERON:0002619;6.37e-27;22!UBERON:0001950;7.06e-24;20!UBERON:0000956;4.87e-23;25!UBERON:0000203;4.87e-23;25!UBERON:0001017;7.91e-19;75!UBERON:0000955;1.17e-18;68!UBERON:0002420;8.65e-16;9!UBERON:0007245;8.65e-16;9!UBERON:0010009;8.65e-16;9!UBERON:0010011;8.65e-16;9!UBERON:0000454;8.65e-16;9!UBERON:0000125;2.86e-15;9!UBERON:0002308;2.86e-15;9!UBERON:0001016;4.16e-15;83!UBERON:0009663;1.91e-12;7!UBERON:0000200;4.98e-11;6!UBERON:0001894;6.19e-11;7!UBERON:0004732;3.34e-10;13!UBERON:0002298;6.81e-10;6!UBERON:0000349;1.16e-09;5!UBERON:0004733;2.96e-09;12!UBERON:0002028;2.96e-09;12!UBERON:0001871;7.77e-09;6!UBERON:0000369;2.21e-08;4!UBERON:0002435;2.21e-08;4!UBERON:0000204;2.21e-08;4!UBERON:0011216;2.97e-08;132!UBERON:0003296;3.82e-07;4!UBERON:0010133;3.82e-07;4!UBERON:0002784;4.60e-07;4!UBERON:0005383;8.15e-07;3!UBERON:0005382;8.15e-07;3!UBERON:0001870;9.95e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.37e-114,114;UBERON:0001049,7.41e-58,56;UBERON:0005068,7.41e-58,56;UBERON:0006241,7.41e-58,56;UBERON:0007135,7.41e-58,56;UBERON:0000073,2.20e-53,53;UBERON:0002616,2.20e-53,53;UBERON:0002780,1.77e-45,41;UBERON:0001890,1.77e-45,41;UBERON:0003080,1.77e-45,41;UBERON:0006240,1.77e-45,41;UBERON:0003075,7.65e-44,82;UBERON:0007284,7.65e-44,82;UBERON:0001017,1.84e-42,81;UBERON:0000955,5.44e-42,68;UBERON:0006238,5.44e-42,68;UBERON:0002346,5.05e-41,86;UBERON:0001016,3.61e-38,89;UBERON:0003528,2.77e-36,34;UBERON:0002020,2.77e-36,34;UBERON:0001893,6.04e-36,34;UBERON:0001869,1.56e-33,32;UBERON:0010314,1.67e-33,132;UBERON:0002791,1.99e-33,32;UBERON:0010371,1.99e-32,104;UBERON:0003056,6.00e-30,61;UBERON:0002619,6.24e-27,22;UBERON:0001950,7.17e-24,20;UBERON:0000956,4.79e-23,25;UBERON:0000203,4.79e-23,25;UBERON:0011216,7.25e-22,223;UBERON:0004121,5.84e-20,171;UBERON:0000924,5.84e-20,171;UBERON:0006601,5.84e-20,171;UBERON:0004111,2.08e-18,240;UBERON:0000025,2.74e-17,192;UBERON:0002420,9.35e-16,9;UBERON:0007245,9.35e-16,9;UBERON:0010009,9.35e-16,9;UBERON:0010011,9.35e-16,9;UBERON:0000454,9.35e-16,9;UBERON:0000125,2.96e-15,9;UBERON:0002308,2.96e-15,9;UBERON:0003076,3.53e-13,15;UBERON:0003057,3.53e-13,15;UBERON:0009663,2.06e-12,7;UBERON:0000200,4.82e-11,6;UBERON:0001894,6.10e-11,7;UBERON:0006222,6.10e-11,7;UBERON:0004732,3.34e-10,13;UBERON:0002298,6.98e-10,6;UBERON:0000349,1.12e-09,5;UBERON:0000483,2.59e-09,306;UBERON:0004733,3.11e-09,12;UBERON:0002028,3.11e-09,12;UBERON:0007277,3.11e-09,12;UBERON:0000119,4.72e-09,309;UBERON:0001871,8.16e-09,6;UBERON:0000369,2.23e-08,4;UBERON:0002435,2.23e-08,4;UBERON:0000204,2.23e-08,4;UBERON:0010082,2.23e-08,4;UBERON:0003296,3.85e-07,4;UBERON:0010133,3.85e-07,4;UBERON:0002784,4.24e-07,4;UBERON:0005383,8.15e-07,3;UBERON:0005382,8.15e-07,3;UBERON:0001870,9.95e-07,3 | |||
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| ||
|short_description=p9@SPARCL1 | |||
}} | }} |
Latest revision as of 06:01, 19 September 2015
Short description: | p9@SPARCL1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SPARCL1_5end |
Coexpression cluster: | C371_occipital_medial_brain_parietal_amygdala_frontal_olfactory |
Association with transcript: | -35bp_to_ENST00000543631_5end |
EntrezGene: | SPARCL1 |
HGNC: | 11220 |
UniProt: | F5H4Y3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data