FFCP PHASE1:Hg19::chr6:50786547..50786564,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7021 | |EntrezGene=7021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11743 | |HGNC=11743 | ||
|TSSclassifier=strong | |||
|UniProt=Q92481 | |UniProt=Q92481 | ||
|association_with_transcript=108bp_to_ENST00000263046,NM_003221,uc003pag.2_5end | |association_with_transcript=108bp_to_ENST00000263046,NM_003221,uc003pag.2_5end | ||
|cluster_id=chr6:50786547..50786564,+ | |||
|coexpression_cluster_id=C2863 | |||
|description=CAGE_peak_3_at_TFAP2B_5end | |description=CAGE_peak_3_at_TFAP2B_5end | ||
|id=chr6:50786547..50786564,+ | |id=chr6:50786547..50786564,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.31e-14!5;CL:1000507!1.82e-13!12;CL:1000494!1.82e-13!12;CL:1000449!2.32e-12!16;CL:1000497!8.77e-11!18;CL:0002518!8.77e-11!18;CL:0000075!2.98e-10!27;CL:0000239!3.21e-09!3;CL:1000615!3.21e-09!3;CL:0002306!3.21e-09!3;CL:0000242!4.34e-07!2;CL:0002681!5.36e-07!13;CL:0002584!5.36e-07!13;CL:0002367!7.06e-07!2 | |ontology_enrichment_celltype=CL:0002322!3.31e-14!5;CL:1000507!1.82e-13!12;CL:1000494!1.82e-13!12;CL:1000449!2.32e-12!16;CL:1000497!8.77e-11!18;CL:0002518!8.77e-11!18;CL:0000075!2.98e-10!27;CL:0000239!3.21e-09!3;CL:1000615!3.21e-09!3;CL:0002306!3.21e-09!3;CL:0000242!4.34e-07!2;CL:0002681!5.36e-07!13;CL:0002584!5.36e-07!13;CL:0002367!7.06e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.46e-14;2!CL:0000242;2.46e-14;2!CL:0000075;2.97e-14;27!CL:0002367;6.41e-14;2!CL:0002322;2.81e-12;5!CL:0000710;3.01e-11;20!CL:0002321;6.32e-11;15!CL:1000449;1.86e-10;15!CL:1000507;1.94e-10;10!CL:1000494;1.94e-10;10!CL:0000197;1.96e-10;6!CL:0000098;1.96e-10;6!CL:0002167;1.96e-10;6!CL:0002077;4.86e-10;34!CL:0000239;1.57e-09;3!CL:1000615;1.57e-09;3!CL:0002306;1.57e-09;3!CL:1000497;3.33e-09;17!CL:0002518;3.33e-09;17!CL:0000342;1.39e-07;1!CL:0002550;1.39e-07;1!CL:0002565;1.39e-07;1!CL:0000147;1.58e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.16e-14,2;CL:0000075,3.06e-14,27;CL:0002367,6.62e-14,2;CL:0002322,2.41e-12,5;CL:0000710,2.87e-11,20;CL:0002077,3.23e-11,34;CL:1000449,2.06e-10,15;CL:0000197,2.06e-10,6;CL:0000098,2.06e-10,6;CL:0002167,2.06e-10,6;CL:1000507,2.07e-10,10;CL:1000494,2.07e-10,10;CL:0000239,1.86e-09,3;CL:1000615,1.86e-09,3;CL:0002306,1.86e-09,3;CL:1000497,3.65e-09,17;CL:0002518,3.65e-09,17;CL:0000133,4.05e-09,59;CL:0000342,9.72e-08,1;CL:0002565,9.72e-08,1;CL:0002550,1.11e-07,1;CL:0000147,1.34e-07,14;CL:0000221,3.23e-07,72;CL:0000333,9.44e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.89e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000080!2.66e-16!18;UBERON:0002120!2.66e-16!18;UBERON:0004875!2.66e-16!18;UBERON:0005721!2.66e-16!18;UBERON:0005754!2.66e-16!18;UBERON:0007297!2.66e-16!18;UBERON:0006555!1.96e-14!17;UBERON:0005103!1.96e-14!17;UBERON:0000083!1.96e-14!17;UBERON:0009201!1.96e-14!17;UBERON:0004819!1.96e-14!17;UBERON:0006553!1.96e-14!17;UBERON:0003074!1.96e-14!17;UBERON:0003060!1.96e-14!17;UBERON:0004876!2.05e-14!20;UBERON:0003887!1.32e-13!21;UBERON:0009773!1.82e-13!12;UBERON:0001231!1.82e-13!12;UBERON:0004810!1.82e-13!12;UBERON:0000058!1.34e-12!26;UBERON:0004211!2.32e-12!16;UBERON:0001285!2.32e-12!16;UBERON:0007684!2.32e-12!16;UBERON:0003220!2.32e-12!16;UBERON:0004208!2.32e-12!16;UBERON:0002113!7.11e-12!27;UBERON:0003918!7.11e-12!27;UBERON:0005095!7.11e-12!27;UBERON:0007687!7.11e-12!27;UBERON:0000489!2.61e-11!32;UBERON:0003076!6.82e-10!15;UBERON:0003057!6.82e-10!15;UBERON:0004733!7.95e-10!12;UBERON:0002028!7.95e-10!12;UBERON:0007277!7.95e-10!12;UBERON:0006853!3.21e-09!3;UBERON:0007685!3.21e-09!3;UBERON:0004134!3.21e-09!3;UBERON:0004732!5.47e-09!13;UBERON:0006947!5.69e-09!3;UBERON:0004054!5.69e-09!3;UBERON:0002298!2.96e-08!8;UBERON:0002680!3.62e-07!9;UBERON:0001895!3.62e-07!9;UBERON:0010092!3.62e-07!9;UBERON:0001225!5.36e-07!13;UBERON:0008987!5.36e-07!13;UBERON:0005969!7.06e-07!2;UBERON:0003956!7.06e-07!2;UBERON:0005904!8.23e-07!4 | |ontology_enrichment_uberon=UBERON:0000080!2.66e-16!18;UBERON:0002120!2.66e-16!18;UBERON:0004875!2.66e-16!18;UBERON:0005721!2.66e-16!18;UBERON:0005754!2.66e-16!18;UBERON:0007297!2.66e-16!18;UBERON:0006555!1.96e-14!17;UBERON:0005103!1.96e-14!17;UBERON:0000083!1.96e-14!17;UBERON:0009201!1.96e-14!17;UBERON:0004819!1.96e-14!17;UBERON:0006553!1.96e-14!17;UBERON:0003074!1.96e-14!17;UBERON:0003060!1.96e-14!17;UBERON:0004876!2.05e-14!20;UBERON:0003887!1.32e-13!21;UBERON:0009773!1.82e-13!12;UBERON:0001231!1.82e-13!12;UBERON:0004810!1.82e-13!12;UBERON:0000058!1.34e-12!26;UBERON:0004211!2.32e-12!16;UBERON:0001285!2.32e-12!16;UBERON:0007684!2.32e-12!16;UBERON:0003220!2.32e-12!16;UBERON:0004208!2.32e-12!16;UBERON:0002113!7.11e-12!27;UBERON:0003918!7.11e-12!27;UBERON:0005095!7.11e-12!27;UBERON:0007687!7.11e-12!27;UBERON:0000489!2.61e-11!32;UBERON:0003076!6.82e-10!15;UBERON:0003057!6.82e-10!15;UBERON:0004733!7.95e-10!12;UBERON:0002028!7.95e-10!12;UBERON:0007277!7.95e-10!12;UBERON:0006853!3.21e-09!3;UBERON:0007685!3.21e-09!3;UBERON:0004134!3.21e-09!3;UBERON:0004732!5.47e-09!13;UBERON:0006947!5.69e-09!3;UBERON:0004054!5.69e-09!3;UBERON:0002298!2.96e-08!8;UBERON:0002680!3.62e-07!9;UBERON:0001895!3.62e-07!9;UBERON:0010092!3.62e-07!9;UBERON:0001225!5.36e-07!13;UBERON:0008987!5.36e-07!13;UBERON:0005969!7.06e-07!2;UBERON:0003956!7.06e-07!2;UBERON:0005904!8.23e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005969;6.41e-14;2!UBERON:0003956;6.41e-14;2!UBERON:0006555;1.86e-10;15!UBERON:0004819;1.86e-10;15!UBERON:0001285;1.86e-10;15!UBERON:0007684;1.86e-10;15!UBERON:0004211;1.94e-10;10!UBERON:0009773;1.94e-10;10!UBERON:0001231;1.94e-10;10!UBERON:0004810;1.94e-10;10!UBERON:0002203;3.66e-10;6!UBERON:0001768;3.66e-10;6!UBERON:0002200;3.66e-10;6!UBERON:0006853;1.57e-09;3!UBERON:0007685;1.57e-09;3!UBERON:0004134;1.57e-09;3!UBERON:0001301;4.98e-08;1!UBERON:0000970;6.33e-08;20!UBERON:0007029;1.39e-07;1!UBERON:0002506;1.39e-07;1!UBERON:0001769;1.39e-07;1!UBERON:0002104;1.55e-07;21!UBERON:0000020;7.35e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,6.62e-14,2;UBERON:0003956,6.62e-14,2;UBERON:0006555,6.85e-14,16;UBERON:0004819,6.85e-14,16;UBERON:0004211,2.06e-10,15;UBERON:0009773,2.06e-10,15;UBERON:0001231,2.06e-10,15;UBERON:0001285,2.06e-10,15;UBERON:0007684,2.06e-10,15;UBERON:0004208,2.06e-10,15;UBERON:0004810,2.07e-10,10;UBERON:0002203,3.12e-10,6;UBERON:0001768,3.12e-10,6;UBERON:0002200,3.12e-10,6;UBERON:0006853,1.86e-09,3;UBERON:0007685,1.86e-09,3;UBERON:0004134,1.86e-09,3;UBERON:0002113,2.38e-08,26;UBERON:0003918,2.38e-08,26;UBERON:0011143,2.38e-08,26;UBERON:0005095,2.38e-08,26;UBERON:0007687,2.38e-08,26;UBERON:0001301,4.99e-08,1;UBERON:0002506,9.72e-08,1;UBERON:0001769,9.72e-08,1;UBERON:0007029,1.35e-07,1;UBERON:0000970,1.49e-07,21;UBERON:0002104,1.49e-07,21;UBERON:0000489,6.45e-07,31 | |||
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| ||
|short_description=p3@TFAP2B | |short_description=p3@TFAP2B | ||
}} | }} |
Latest revision as of 05:24, 19 September 2015
Short description: | p3@TFAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TFAP2B_5end |
Coexpression cluster: | C2863_neuroepithelioma_breast_neuroblastoma_merkel_epididymis_neuroectodermal_Trabecular |
Association with transcript: | 108bp_to_ENST00000263046, NM_003221, uc003pag.2_5end |
EntrezGene: | TFAP2B |
HGNC: | 11743 |
UniProt: | Q92481 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.16e-14 | 2 |
columnar/cuboidal epithelial cell | 3.06e-14 | 27 |
trabecular meshwork cell | 6.62e-14 | 2 |
embryonic stem cell | 2.41e-12 | 5 |
neurecto-epithelial cell | 2.87e-11 | 20 |
ecto-epithelial cell | 3.23e-11 | 34 |
epithelial cell of nephron | 2.06e-10 | 15 |
receptor cell | 2.06e-10 | 6 |
sensory epithelial cell | 2.06e-10 | 6 |
olfactory epithelial cell | 2.06e-10 | 6 |
kidney tubule cell | 2.07e-10 | 10 |
nephron tubule epithelial cell | 2.07e-10 | 10 |
brush border epithelial cell | 1.86e-09 | 3 |
kidney cortex tubule cell | 1.86e-09 | 3 |
epithelial cell of proximal tubule | 1.86e-09 | 3 |
kidney cell | 3.65e-09 | 17 |
kidney epithelial cell | 3.65e-09 | 17 |
neurectodermal cell | 4.05e-09 | 59 |
pigment cell (sensu Vertebrata) | 9.72e-08 | 1 |
iris pigment epithelial cell | 9.72e-08 | 1 |
fibroblast of the conjuctiva | 1.11e-07 | 1 |
pigment cell | 1.34e-07 | 14 |
ectodermal cell | 3.23e-07 | 72 |
migratory neural crest cell | 9.44e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 6.62e-14 | 2 |
aqueous drainage system | 6.62e-14 | 2 |
excretory tube | 6.85e-14 | 16 |
kidney epithelium | 6.85e-14 | 16 |
nephron epithelium | 2.06e-10 | 15 |
renal tubule | 2.06e-10 | 15 |
nephron tubule | 2.06e-10 | 15 |
nephron | 2.06e-10 | 15 |
uriniferous tubule | 2.06e-10 | 15 |
nephrogenic mesenchyme | 2.06e-10 | 15 |
nephron tubule epithelium | 2.07e-10 | 10 |
vasculature of eye | 3.12e-10 | 6 |
uvea | 3.12e-10 | 6 |
vasculature of head | 3.12e-10 | 6 |
renal cortex tubule | 1.86e-09 | 3 |
region of nephron tubule | 1.86e-09 | 3 |
proximal tubule | 1.86e-09 | 3 |
kidney | 2.38e-08 | 26 |
kidney mesenchyme | 2.38e-08 | 26 |
upper urinary tract | 2.38e-08 | 26 |
kidney rudiment | 2.38e-08 | 26 |
kidney field | 2.38e-08 | 26 |
epididymis | 4.99e-08 | 1 |
iris epithelium | 9.72e-08 | 1 |
iris | 9.72e-08 | 1 |
surface | 1.35e-07 | 1 |
eye | 1.49e-07 | 21 |
visual system | 1.49e-07 | 21 |
cavitated compound organ | 6.45e-07 | 31 |