FFCP PHASE1:Hg19::chr18:29077990..29078034,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:29077990..29078034,+ to FFCP PHASE1:Hg19::chr18:29077990..29078034,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1829 | |EntrezGene=1829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3049 | |HGNC=3049 | ||
|TSSclassifier=strong | |||
|UniProt=Q14126 | |UniProt=Q14126 | ||
|association_with_transcript=0bp_to_ENST00000261590,NM_001943,uc002kwu.3_5end | |||
|cluster_id=chr18:29077990..29078034,+ | |||
|coexpression_cluster_id=C2456 | |||
|description=CAGE_peak_2_at_DSG2_5end | |||
|id=chr18:29077990..29078034,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.72e-28!254;CL:0000223!2.06e-15!59;CL:0002076!8.08e-13!43;CL:0002251!1.67e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.42e-11;42!CL:0002251;1.39e-08;20!CL:0000039;1.65e-08;7!CL:0000586;1.65e-08;7!CL:0002322;7.93e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.46e-27,253;CL:0000223,2.61e-17,58;CL:0002076,2.72e-14,42;CL:0002251,1.56e-08,20;CL:0000039,1.67e-08,7;CL:0000586,1.67e-08,7;CL:0002322,8.14e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;2.20e-09;58!UBERON:0001041;1.74e-07;30 | |||
|ontology_enrichment_disease=DOID:305!3.35e-24!106;DOID:0050687!1.62e-18!143;DOID:14566!7.00e-12!239;DOID:162!1.11e-11!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.98e-18,106;DOID:0050687,1.46e-12,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.17e-20!169;UBERON:0000925!1.17e-20!169;UBERON:0006595!1.17e-20!169;UBERON:0004921!4.13e-17!129;UBERON:0004185!4.13e-17!129;UBERON:0001007!1.39e-16!155;UBERON:0001555!1.39e-16!155;UBERON:0007026!1.39e-16!155;UBERON:0001048!9.56e-14!168;UBERON:0000077!2.59e-13!130;UBERON:0001041!1.10e-12!98;UBERON:0000466!5.21e-12!126;UBERON:0005911!2.77e-11!82;UBERON:0000481!1.61e-09!347;UBERON:0001004!2.19e-09!72;UBERON:0000464!2.30e-09!104;UBERON:0005177!4.48e-08!107;UBERON:0000065!2.08e-07!53;UBERON:0003104!2.19e-07!238;UBERON:0009142!2.19e-07!238;UBERON:0005409!3.72e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.90e-07;33!UBERON:0005911;9.40e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.38e-20,160;UBERON:0000925,3.38e-20,160;UBERON:0006595,3.38e-20,160;UBERON:0001007,3.31e-15,145;UBERON:0001555,3.31e-15,145;UBERON:0007026,3.31e-15,145;UBERON:0005911,4.81e-15,82;UBERON:0004921,1.16e-14,118;UBERON:0001048,2.07e-10,160;UBERON:0001041,5.02e-10,87;UBERON:0001004,1.35e-08,74;UBERON:0003929,2.72e-08,54;UBERON:0005177,5.59e-08,101;UBERON:0002530,4.03e-07,59;UBERON:0005153,5.55e-07,37;UBERON:0001008,8.37e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.7030733015166,0.697801167972428,4.36882744260345,2.11013582582763,1.11389717664042,0.331397375727916,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0.408001382488506,0,1.14494394852423,1.09499540058307,0.627713197974014,1.83392173795083,2.29881650459848,2.51874500203774,0,0,0,0,1.50602959389125,1.47901604066715,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0.144824403882799,0,1.34140171940727,0.639312809217652,0,0.50133791063589,0,0,0.486634870302636,2.6469748805939,1.77383517970051,1.66886092816939,0.72038491523742,0.728590576585084,1.11235332835329,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.264818361626438,0,0,1.12135520028461,1.06748995729705,1.48000529050296,0.311211035399766,0.134710672069688,0.326923806226917,0,1.72852777344,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67195621010264,2.72746120590835,3.72845974005705,17.3202662704025,18.5541675650079,17.5452853732973,17.4150572425822,16.9054970086671,20.8037094673223,0,0,0,0,0,0.591534000199219,1.01150814046861,0.723033089650446,1.21323370005633,0.653638332277218,1.18635309555548,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0.4115740113314,0,5.07020139287323,1.96565443335525,1.77236972004421,0,3.81264159483652,3.77449182656756,2.74375713521564,0,2.41269533787914,5.09236448371913,0,0,5.77325368101093,1.27523445472584,3.63966952131047,0.144366447761074,0,0,0,0,0,0,0,2.81201501960331,7.39121364074982,6.66342957039216,2.23896306757121,3.48760726216754,1.53353071666084,0,0,0,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0.571652865261156,0.112131084345361,0.43596006883328,0.22001485746285,0.646358578788889,0,0,0,0,0,0,0.266422179016099,0.857867961948885,0,1.64648067356154,0.325736184293735,0.710783897485092,0.791951872933429,1.20575750823834,0.871533458600294,2.29937879718731,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0.508189248444927,1.30139853857622,0,0.335032530668698,0,0,0,0,1.47229790062968,0.500170521059677,0.813795071099207,0.415941723061614,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.5156378572313,0,3.62868351995616,0,0.153461973288062,0.561320188866147,0,0,0,0,0,0.177561725313127,0,0,0,3.2632051389738,9.62431057455767,1.38121483403844,0,0,0,2.70719767744447,9.70393247515626,0,0,7.91637216696568,0,0,3.23873874153209,0,0.812839312631559,1.50506932156456,3.05851527654046,3.3243040357149,2.0148727924996,0,0,1.28225062558195,0.328014645699706,3.90454073597164,3.29731237272711,0.54941678891006,0,2.29706215198469,0,0,0.386682873168488,0,0,0.275673144969061,0.644521469209642,0.870100163485371,0.511359764496605,0,15.20621221321,14.9908252544783,7.52915003718046,18.8153472391323,0,0,0,0,0,0,0,0,0,0.316379424718726,1.33441135746677,0,0,0,0,0,0.823611089208164,0.471249609382746,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0.405820753925408,0.92947049429925,0,2.00775893085672,0.982490410131212,0.35667105148125,0.354761064070598,0,0,0.379473173765715,0,2.21310859268678,0.670302275535787,1.08890984861323,3.01260162485693,1.29151611801369,3.36942951335251,1.33029046061003,7.12142540641574,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.995985806877798,0.318852545457645,0,1.1490322207942,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,0.671028323677248,0,0,0,0,0,0,0,1.49712432326576,1.31857361344705,0,0,0,7.40107902686839,2.37571744666111,4.60741053148848,0,0,0,0,1.05562704063997,0.398495976502139,0,15.8717631148194,0.20453736500431,1.6001024709939,0.622079175323615,7.63880984752278,1.25314822272926,0,0.690503839458535,0,0,0,0.185536196323703,0,0.7812832832557,0.174919999992391,2.89999830173917,1.93448862085349,1.77977555204936,6.85524277127015,1.37897349296586,0,0.520874984799877,0,0,0,0,0.295547618953547,0.87754158861589,0.871507708151921,1.11538995422883,0.461701551022782,0,26.975976813403,21.6315923027551,10.3215003325908,3.82801391678303,1.64875668123352,5.33034776018635,0,0,0,2.03036094555463,2.94093801476609,2.68514539161348,0.37950746544837,0,9.91690903281727,1.30586246527318,2.40300221437699,23.5863617318879,0.995261931078505,7.87272324079719,2.4441205797345,0,0.123563938946503,0.104421949505455,0.337005664903385,0,0,0,1.17398771359254,0.242780379534093,1.57833761139756,2.41981432097328,0.30607276163049,0.189559738885464,3.00646838828985,2.28114021073944,0.664653872707185,0.330991955875499,0,1.19472429772959,6.54601955868523,0,2.60339607502696,2.44980993535944,2.52471699083167,1.7472666824203,0.343972064943233,0.483781656445426,0.950161122120412,0.410577285266046,0.969890164884194,0,0.677942222341597,0.959293472527256,0.19871461170299,0.0633107959558787,0,6.4127056201227,1.70762395791482,0.799238438328521,2.73771792592801,6.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| 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| ||
|short_description=p2@DSG2 | |||
}} | }} |
Latest revision as of 05:08, 19 September 2015
Short description: | p2@DSG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DSG2_5end |
Coexpression cluster: | C2456_hepatoblastoma_iPS_choriocarcinoma_colon_HES3GFP_argyrophil_H9 |
Association with transcript: | 0bp_to_ENST00000261590, NM_001943, uc002kwu.3_5end |
EntrezGene: | DSG2 |
HGNC: | 3049 |
UniProt: | Q14126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.46e-27 | 253 |
endodermal cell | 2.61e-17 | 58 |
endo-epithelial cell | 2.72e-14 | 42 |
epithelial cell of alimentary canal | 1.56e-08 | 20 |
germ line cell | 1.67e-08 | 7 |
germ cell | 1.67e-08 | 7 |
embryonic stem cell | 8.14e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.38e-20 | 160 |
endoderm | 3.38e-20 | 160 |
presumptive endoderm | 3.38e-20 | 160 |
digestive system | 3.31e-15 | 145 |
digestive tract | 3.31e-15 | 145 |
primitive gut | 3.31e-15 | 145 |
endo-epithelium | 4.81e-15 | 82 |
subdivision of digestive tract | 1.16e-14 | 118 |
primordium | 2.07e-10 | 160 |
foregut | 5.02e-10 | 87 |
respiratory system | 1.35e-08 | 74 |
gut epithelium | 2.72e-08 | 54 |
trunk region element | 5.59e-08 | 101 |
gland | 4.03e-07 | 59 |
epithelial bud | 5.55e-07 | 37 |
renal system | 8.37e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.98e-18 | 106 |
cell type cancer | 1.46e-12 | 143 |