FFCP PHASE1:Hg19::chr1:70033122..70033131,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57554 | |EntrezGene=57554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=18531 | |HGNC=18531 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NW7 | |UniProt=Q96NW7 | ||
|association_with_transcript=254bp_to_uc001deo.1_5end | |||
|cluster_id=chr1:70033122..70033131,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_20_at_LRRC7_5end | |||
|id=chr1:70033122..70033131,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001875;4.66e-21;2!UBERON:0006514;4.66e-21;2!UBERON:0002114;1.60e-14;2!UBERON:0000922;6.13e-12;49!UBERON:0003528;8.99e-11;34!UBERON:0002020;8.99e-11;34!UBERON:0002791;2.18e-10;32!UBERON:0001869;2.18e-10;32!UBERON:0002108;2.97e-09;4!UBERON:0001872;2.97e-09;5!UBERON:0002021;2.97e-09;5!UBERON:0001950;1.42e-08;20!UBERON:0001016;2.43e-08;83!UBERON:0000955;2.60e-08;68!UBERON:0002780;4.44e-08;41!UBERON:0001890;4.44e-08;41!UBERON:0002619;6.52e-08;22!UBERON:0001893;3.51e-07;34!UBERON:0000956;4.15e-07;25!UBERON:0000203;4.15e-07;25!UBERON:0009663;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,4.66e-21,2;UBERON:0006514,4.66e-21,2;UBERON:0002114,1.40e-14,2;UBERON:0002791,1.43e-11,32;UBERON:0001869,1.43e-11,32;UBERON:0003528,5.87e-11,34;UBERON:0002020,5.87e-11,34;UBERON:0001893,5.87e-11,34;UBERON:0000955,1.01e-09,68;UBERON:0006238,1.01e-09,68;UBERON:0002108,2.74e-09,4;UBERON:0002780,2.90e-09,41;UBERON:0001890,2.90e-09,41;UBERON:0003080,2.90e-09,41;UBERON:0006240,2.90e-09,41;UBERON:0001872,3.22e-09,5;UBERON:0002021,3.49e-09,5;UBERON:0001950,1.59e-08,20;UBERON:0001017,2.69e-08,81;UBERON:0002619,7.23e-08,22;UBERON:0001016,1.53e-07,89;UBERON:0000073,2.27e-07,53;UBERON:0002616,2.27e-07,53;UBERON:0000956,4.55e-07,25;UBERON:0000203,4.55e-07,25;UBERON:0001049,5.09e-07,56;UBERON:0005068,5.09e-07,56;UBERON:0006241,5.09e-07,56;UBERON:0007135,5.09e-07,56;UBERON:0009663,5.70e-07,7 | |||
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|short_description=p20@LRRC7 | |||
}} | }} |
Latest revision as of 03:30, 19 September 2015
Short description: | p20@LRRC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 254bp_to_uc001deo.1_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | Q96NW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
globus pallidus | 4.66e-21 | 2 |
pallidum | 4.66e-21 | 2 |
duodenum | 1.40e-14 | 2 |
regional part of telencephalon | 1.43e-11 | 32 |
cerebral hemisphere | 1.43e-11 | 32 |
brain grey matter | 5.87e-11 | 34 |
gray matter | 5.87e-11 | 34 |
telencephalon | 5.87e-11 | 34 |
brain | 1.01e-09 | 68 |
future brain | 1.01e-09 | 68 |
small intestine | 2.74e-09 | 4 |
regional part of forebrain | 2.90e-09 | 41 |
forebrain | 2.90e-09 | 41 |
anterior neural tube | 2.90e-09 | 41 |
future forebrain | 2.90e-09 | 41 |
parietal lobe | 3.22e-09 | 5 |
occipital lobe | 3.49e-09 | 5 |
neocortex | 1.59e-08 | 20 |
central nervous system | 2.69e-08 | 81 |
regional part of cerebral cortex | 7.23e-08 | 22 |
nervous system | 1.53e-07 | 89 |
regional part of nervous system | 2.27e-07 | 53 |
regional part of brain | 2.27e-07 | 53 |
cerebral cortex | 4.55e-07 | 25 |
pallium | 4.55e-07 | 25 |
neural tube | 5.09e-07 | 56 |
neural rod | 5.09e-07 | 56 |
future spinal cord | 5.09e-07 | 56 |
neural keel | 5.09e-07 | 56 |
telencephalic nucleus | 5.70e-07 | 7 |