FFCP PHASE1:Hg19::chr19:4910177..4910205,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29128 | |EntrezGene=29128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=12556 | |HGNC=12556 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T88 | |UniProt=Q96T88 | ||
|association_with_transcript=0bp_to_ENST00000455180,uc010duf.2_5end | |association_with_transcript=0bp_to_ENST00000455180,uc010duf.2_5end | ||
|cluster_id=chr19:4910177..4910205,+ | |||
|coexpression_cluster_id=C3809 | |||
|description=CAGE_peak_4_at_UHRF1_5end | |description=CAGE_peak_4_at_UHRF1_5end | ||
|id=chr19:4910177..4910205,+ | |id=chr19:4910177..4910205,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.33e-16!180;CL:0000012!1.73e-13!682;CL:0000548!1.86e-13!679;CL:0000004!1.86e-13!679;CL:0000255!1.86e-13!679;CL:0000144!2.92e-11!625;CL:0002371!3.85e-10!591;CL:0000003!1.94e-09!722;CL:0000057!3.73e-09!75;CL:0000333!2.82e-08!41;CL:0002321!3.85e-08!248;CL:0000220!4.11e-08!246;CL:0000133!2.70e-07!59;CL:0002620!4.35e-07!23 | |ontology_enrichment_celltype=CL:0000055!2.33e-16!180;CL:0000012!1.73e-13!682;CL:0000548!1.86e-13!679;CL:0000004!1.86e-13!679;CL:0000255!1.86e-13!679;CL:0000144!2.92e-11!625;CL:0002371!3.85e-10!591;CL:0000003!1.94e-09!722;CL:0000057!3.73e-09!75;CL:0000333!2.82e-08!41;CL:0002321!3.85e-08!248;CL:0000220!4.11e-08!246;CL:0000133!2.70e-07!59;CL:0002620!4.35e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-07;23!CL:0000128;2.29e-07;7!CL:0000126;2.29e-07;7!CL:0000127;2.29e-07;7!CL:0002681;2.99e-07;12!CL:0002584;2.99e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.93e-08,23;CL:0000219,1.56e-07,386;CL:0000128,2.05e-07,7;CL:0000126,2.05e-07,7;CL:0000127,2.05e-07,7;CL:0002453,2.05e-07,7;CL:0002681,4.62e-07,12;CL:0002584,4.62e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.29e-12!51;DOID:0060083!1.29e-12!51;DOID:1240!8.77e-12!39;DOID:162!1.82e-10!235;DOID:8692!3.55e-10!31;DOID:14566!5.07e-10!239 | |ontology_enrichment_disease=DOID:2531!1.29e-12!51;DOID:0060083!1.29e-12!51;DOID:1240!8.77e-12!39;DOID:162!1.82e-10!235;DOID:8692!3.55e-10!31;DOID:14566!5.07e-10!239 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.05e-11;39!DOID:8692;1.39e-11;31!DOID:2531;6.70e-10;51!DOID:0060083;6.70e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.48e-15,51;DOID:0060083,5.48e-15,51;DOID:1240,1.36e-14,39;DOID:8692,6.19e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0001801!2.17e-07!14;UBERON:0000019!3.57e-07!19;UBERON:0000047!3.57e-07!19;UBERON:0004088!3.57e-07!19;UBERON:0003072!3.57e-07!19;UBERON:0003071!3.57e-07!19;UBERON:0004128!3.57e-07!19;UBERON:0000970!6.31e-07!20;UBERON:0002200!7.00e-07!11;UBERON:0006876!7.00e-07!11 | |ontology_enrichment_uberon=UBERON:0001801!2.17e-07!14;UBERON:0000019!3.57e-07!19;UBERON:0000047!3.57e-07!19;UBERON:0004088!3.57e-07!19;UBERON:0003072!3.57e-07!19;UBERON:0003071!3.57e-07!19;UBERON:0004128!3.57e-07!19;UBERON:0000970!6.31e-07!20;UBERON:0002200!7.00e-07!11;UBERON:0006876!7.00e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;9.19e-09;11!UBERON:0002203;2.57e-08;6!UBERON:0001768;2.57e-08;6!UBERON:0002200;2.57e-08;6!UBERON:0001851;6.31e-08;15!UBERON:0001801;7.25e-08;14!UBERON:0000019;2.57e-07;19!UBERON:0000047;2.57e-07;19!UBERON:0004088;2.57e-07;19!UBERON:0010230;2.57e-07;19!UBERON:0001225;2.99e-07;12!UBERON:0008987;2.99e-07;12!UBERON:0000353;8.25e-07;15!UBERON:0000970;8.53e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,8.15e-09,11;UBERON:0002203,3.03e-08,6;UBERON:0001768,3.03e-08,6;UBERON:0002200,3.03e-08,6;UBERON:0001801,6.01e-08,14;UBERON:0001851,1.28e-07,15;UBERON:0001225,4.62e-07,12;UBERON:0008987,4.62e-07,12;UBERON:0000019,7.36e-07,20;UBERON:0000047,7.36e-07,20;UBERON:0010312,7.36e-07,20;UBERON:0004088,7.36e-07,20;UBERON:0010230,7.36e-07,20;UBERON:0003072,7.36e-07,20;UBERON:0004128,7.36e-07,20;UBERON:0003071,7.36e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.96587149201207,0.697801167972428,1.09220686065086,0.527533956456907,0.123766352960047,0.662794751455832,0.672325146451775,0,0,0,5.66356867153224,5.71201935483908,1.56727360739044,2.0036519099174,4.65373045247806,3.76627918784408,1.29902789771517,1.14940825229924,1.96776953284198,0,0,0,0.919421224478927,1.50602959389125,0,0.542270404062111,0.426507697462265,2.93600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16060901730092,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.255725123687061,1.44575660953827,0,0.434539556882471,0,0,2.83604451492204,2.66075276955077,3.33772185633879,0.0654895377488563,0.728590576585084,0.370784442784429,0,0,0,0.715471872916026,0,0.371457501329565,0.596287222100115,0.860234595106124,1.04142150482278,0,0,0,0.835979866147242,0.775250277507987,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0.732806975721629,0,0,0.872188104285069,0,1.01304409331664,0,0.860509862246441,1.06400514659507,0.560677600142307,0,0.49333509683432,0.311211035399766,0.808264032418128,1.79808093424805,0.908144565869588,2.30470369792,1.40592859100278,0.936480230490962,1.1409436430889,0.597794722207204,2.46612447151906,1.94247533241758,2.66856532734272,0.408308342509787,1.71968044236475,0.103325781175765,1.18800285728205,0.247266929278557,0.910161361938026,0,3.19838616512726,2.75260743718321,0.554128230968366,2.19488810440419,0,0,1.02088964844019,1.97328599257748,0,0.847727604638247,1.80054657650641,1.03052529238439,0.515281080091258,0.18611685633159,1.5189869901714,1.55899208257918,1.51460264546469,0,1.13152239773168,0.710019185033229,1.20902517873168,1.69560592310488,0.773043412653187,0.818238361772504,0.573609190778008,0.487894824518382,0.132529768321485,0.69716365721711,1.24393266018445,1.26160425437814,0.36497735907583,0,0.643240938192885,2.76269842704961,0,0.721879481669586,0.709840800239063,0.337169380156203,0.482022059766964,0.441175890929576,0.435758888184812,0.474541238222193,0.404493924480493,0.196221465125346,0,0.738155454624648,2.80483547606892,0.4115740113314,4.41026134156626,0,0,0,5.29755719297581,0.122988438543114,1.20097467208968,0.219500570817251,0,0.603173834469785,0.277765335475589,0.977424915930974,3.11980435583874,2.88662684050547,1.85488647960123,0.70445216541493,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0.246217006087397,0,0,0,0.503946384596579,0,0.0895585227028483,0.290633938513962,1.15014803749563,0,0.176096868026452,0,0,0,0.698476837213859,0,1.17217447210047,0,0.616964956219941,0.300343057843917,0,4.59737445815979,3.05172048183296,1.6134422880609,0.129271715757778,0,0,0,0,3.08648849114571,2.83698264046557,2.93064396917709,0.285955987316295,0,3.29296134712308,0.977208552881205,0,1.58390374586686,0,0,0.199945982364114,0,0,0,0.239624855491583,0,2.85273810081437,0.289562613335158,0.821905290201534,1.43248770591916,0.224170287987055,0,0,0.128343036279748,0.254094624222463,0,2.31986643833309,1.00509759200609,0.637938751653163,0,0,0,0,0,0.542530047399471,0.207970861530807,0.535286966391485,0.157702415033935,0,0,0,0,1.32845119707087,1.47495334833363,1.04260337361699,0.783204629850962,2.40200396667599,0,0,0,0.303127571446259,0,2.11673205330776,0,0,0,0,0.511707249066704,0,0,0.771048469013278,0.532685175939381,0.9033987161519,0.519254429183621,2.5566283261191,0.241718899183244,0,0,1.37777337797528,0.546273504020151,0.262248829918848,3.15839729035188,0.308061348417659,0.784349769176855,1.46139224653261,0.316654886678627,4.54933536283586,1.02056223165909,1.72732732881711,0,3.25135725052623,1.00337954770971,1.27438136522519,1.66215201785745,4.02974558499921,0.877039506583738,0.261435451024901,1.02580050046556,0.656029291399411,0.325378394664303,0,0.824125183365091,0.907604499126468,0,0.650060246036521,0,0.580024309752732,1.84858340537573,1.68854042198743,2.48105830472155,0.537101224341368,0.435050081742686,3.06815858697963,1.51354460599453,0,0,0.255225424989168,0,0,0.62962469366128,0.6970372701606,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,0.286249773483982,1.86079184679834,2.21465597303108,0.571890581771475,1.79128453917934,0,0.318203247925937,0,0.179872457583315,1.09814811894422,1.29593642580255,0.404364963146632,0,0.421258456238981,0.975267478179181,0,0,0.818999468447914,0.848432591722276,1.13008116620243,0.551365343546124,0,0.876901770507525,0.578775534266688,0,0.202910376962704,0,1.12678241012897,2.43799298746888,1.08073945114433,0,0.354761064070598,0.211107635297664,0,5.69209760648573,2.0996083214699,0.0962221127255121,1.34060455107157,0,0,0.43050537267123,0,0,0.689170200620878,0.507447609232169,0,0,0,0,0,0,0,1.1750647824022,0,0.735120647943095,1.85803175125719,4.76088402822268,3.05909926398181,1.59426272728822,0.997896857164083,1.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| ||
|short_description=p4@UHRF1 | |short_description=p4@UHRF1 | ||
}} | }} |
Latest revision as of 03:08, 19 September 2015
Short description: | p4@UHRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UHRF1_5end |
Coexpression cluster: | C3809_granulocyte_Astrocyte_Trabecular_acute_Meningeal_Renal_Myoblast |
Association with transcript: | 0bp_to_ENST00000455180, uc010duf.2_5end |
EntrezGene: | UHRF1 |
HGNC: | 12556 |
UniProt: | Q96T88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.93e-08 | 23 |
motile cell | 1.56e-07 | 386 |
oligodendrocyte | 2.05e-07 | 7 |
macroglial cell | 2.05e-07 | 7 |
astrocyte | 2.05e-07 | 7 |
oligodendrocyte precursor cell | 2.05e-07 | 7 |
kidney cortical cell | 4.62e-07 | 12 |
renal cortical epithelial cell | 4.62e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 8.15e-09 | 11 |
vasculature of eye | 3.03e-08 | 6 |
uvea | 3.03e-08 | 6 |
vasculature of head | 3.03e-08 | 6 |
anterior segment of eyeball | 6.01e-08 | 14 |
cortex | 1.28e-07 | 15 |
cortex of kidney | 4.62e-07 | 12 |
renal parenchyma | 4.62e-07 | 12 |
camera-type eye | 7.36e-07 | 20 |
simple eye | 7.36e-07 | 20 |
immature eye | 7.36e-07 | 20 |
ocular region | 7.36e-07 | 20 |
eyeball of camera-type eye | 7.36e-07 | 20 |
optic cup | 7.36e-07 | 20 |
optic vesicle | 7.36e-07 | 20 |
eye primordium | 7.36e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.48e-15 | 51 |
immune system cancer | 5.48e-15 | 51 |
leukemia | 1.36e-14 | 39 |
myeloid leukemia | 6.19e-12 | 31 |