FFCP PHASE1:Hg19::chr17:2207136..2207150,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:2207136..2207150,- to FFCP PHASE1:Hg19::chr17:2207136..2207150,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23293 | |EntrezGene=23293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17809 | |HGNC=17809 | ||
|TSSclassifier=strong | |||
|UniProt=Q86US8 | |UniProt=Q86US8 | ||
|association_with_transcript=-67bp_to_ENST00000263073,NM_017575,uc002fub.1_5end | |||
|cluster_id=chr17:2207136..2207150,- | |||
|description=CAGE_peak_6_at_SMG6_5end | |||
|id=chr17:2207136..2207150,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.77e-22!115;UBERON:0001049!1.20e-17!57;UBERON:0005068!1.20e-17!57;UBERON:0006241!1.20e-17!57;UBERON:0007135!1.20e-17!57;UBERON:0003075!9.22e-17!86;UBERON:0007284!9.22e-17!86;UBERON:0002346!1.90e-16!90;UBERON:0002616!6.00e-16!59;UBERON:0000955!1.51e-15!69;UBERON:0006238!1.51e-15!69;UBERON:0000073!3.77e-15!94;UBERON:0001016!3.77e-15!94;UBERON:0001017!3.41e-14!82;UBERON:0005743!3.98e-14!86;UBERON:0000153!7.32e-12!129;UBERON:0007811!7.32e-12!129;UBERON:0003080!1.14e-11!42;UBERON:0002780!4.41e-11!41;UBERON:0001890!4.41e-11!41;UBERON:0006240!4.41e-11!41;UBERON:0003056!5.82e-11!61;UBERON:0000033!1.28e-10!123;UBERON:0002020!9.22e-09!34;UBERON:0003528!9.22e-09!34;UBERON:0001893!2.08e-08!34;UBERON:0000924!2.16e-08!173;UBERON:0006601!2.16e-08!173;UBERON:0004121!2.30e-08!169;UBERON:0002791!3.85e-08!33;UBERON:0003076!1.64e-07!15;UBERON:0003057!1.64e-07!15;UBERON:0001869!1.99e-07!32;UBERON:0004732!2.86e-07!13;UBERON:0002308!7.48e-07!9;UBERON:0000125!7.48e-07!9;UBERON:0002298!9.04e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.88e-23;53!UBERON:0002616;7.88e-23;53!UBERON:0004732;1.13e-17;13!UBERON:0002780;1.62e-17;41!UBERON:0001890;1.62e-17;41!UBERON:0002298;8.98e-16;6!UBERON:0004733;7.28e-15;12!UBERON:0002028;7.28e-15;12!UBERON:0001894;1.77e-13;7!UBERON:0000988;2.95e-12;3!UBERON:0000955;7.52e-12;68!UBERON:0003528;1.95e-11;34!UBERON:0002020;1.95e-11;34!UBERON:0001893;1.02e-10;34!UBERON:0002680;1.10e-10;9!UBERON:0001895;1.10e-10;9!UBERON:0000125;2.04e-10;9!UBERON:0002308;2.04e-10;9!UBERON:0002791;8.63e-10;32!UBERON:0001869;8.66e-10;32!UBERON:0001017;1.38e-09;75!UBERON:0002619;1.63e-09;22!UBERON:0003296;2.67e-09;4!UBERON:0010133;2.67e-09;4!UBERON:0002784;5.54e-09;4!UBERON:0000007;7.03e-09;2!UBERON:0002148;7.03e-09;2!UBERON:0006331;7.03e-09;2!UBERON:0009662;7.03e-09;2!UBERON:0001016;7.20e-09;83!UBERON:0007023;1.88e-08;114!UBERON:0001897;1.91e-08;2!UBERON:0001875;1.91e-08;2!UBERON:0005162;1.91e-08;2!UBERON:0000122;1.91e-08;2!UBERON:0006514;1.91e-08;2!UBERON:0010225;1.91e-08;2!UBERON:0000956;2.92e-08;25!UBERON:0000203;2.92e-08;25!UBERON:0001950;3.65e-08;20!UBERON:0002021;1.62e-07;5!UBERON:0002420;8.70e-07;9!UBERON:0007245;8.70e-07;9!UBERON:0010009;8.70e-07;9!UBERON:0010011;8.70e-07;9!UBERON:0000454;8.70e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.03e-35,53;UBERON:0002616,9.03e-35,53;UBERON:0001049,1.29e-32,56;UBERON:0005068,1.29e-32,56;UBERON:0006241,1.29e-32,56;UBERON:0007135,1.29e-32,56;UBERON:0003075,1.08e-26,82;UBERON:0007284,1.08e-26,82;UBERON:0000955,2.04e-25,68;UBERON:0006238,2.04e-25,68;UBERON:0002346,3.74e-25,86;UBERON:0007023,8.88e-25,114;UBERON:0001017,1.87e-22,81;UBERON:0002780,3.56e-22,41;UBERON:0001890,3.56e-22,41;UBERON:0003080,3.56e-22,41;UBERON:0006240,3.56e-22,41;UBERON:0001016,1.62e-21,89;UBERON:0010371,1.11e-19,104;UBERON:0003056,1.52e-19,61;UBERON:0004732,1.17e-17,13;UBERON:0010314,7.99e-17,132;UBERON:0003528,1.27e-15,34;UBERON:0002020,1.27e-15,34;UBERON:0002298,1.71e-15,6;UBERON:0004733,8.56e-15,12;UBERON:0002028,8.56e-15,12;UBERON:0007277,8.56e-15,12;UBERON:0001894,7.48e-14,7;UBERON:0006222,7.48e-14,7;UBERON:0004121,2.32e-13,171;UBERON:0000924,2.32e-13,171;UBERON:0006601,2.32e-13,171;UBERON:0001893,5.10e-13,34;UBERON:0000988,3.12e-12,3;UBERON:0002791,1.01e-11,32;UBERON:0001869,1.01e-11,32;UBERON:0003076,1.24e-11,15;UBERON:0003057,1.24e-11,15;UBERON:0011216,2.21e-11,223;UBERON:0002680,8.64e-11,9;UBERON:0001895,8.64e-11,9;UBERON:0010092,8.64e-11,9;UBERON:0000125,1.44e-10,9;UBERON:0002308,1.44e-10,9;UBERON:0002784,1.87e-09,4;UBERON:0002619,2.10e-09,22;UBERON:0003296,2.42e-09,4;UBERON:0010133,2.42e-09,4;UBERON:0002148,5.42e-09,2;UBERON:0006331,5.42e-09,2;UBERON:0009662,5.42e-09,2;UBERON:0001897,6.33e-09,2;UBERON:0010225,6.33e-09,2;UBERON:0000007,8.98e-09,2;UBERON:0001875,1.66e-08,2;UBERON:0006514,1.66e-08,2;UBERON:0005162,2.24e-08,2;UBERON:0000122,2.24e-08,2;UBERON:0000956,3.64e-08,25;UBERON:0000203,3.64e-08,25;UBERON:0001950,3.82e-08,20;UBERON:0002021,1.83e-07,5;UBERON:0000025,4.49e-07,192;UBERON:0002420,7.87e-07,9;UBERON:0007245,7.87e-07,9;UBERON:0010009,7.87e-07,9;UBERON:0010011,7.87e-07,9;UBERON:0000454,7.87e-07,9 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0.662794751455832,0,0,0,0,0.492484232307152,0.816002764977012,0.313454721478088,0,0.273748850145768,0.251085279189606,0.61130724598361,0.410502947249729,0.393553906568396,0,0.383829398097213,0.154816123316076,0,0.6024118375565,0,0.154934401160603,0,0,0,0.401088894940283,1.08505435357926,0.223915474239924,0.647787332037959,0,0,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0.285012743741249,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0.560508562981536,0,0.786839080455332,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0.651083453856419,0,0.150575119077773,0.639933055772092,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.982343066232845,0.364295288292542,0.741568885568859,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0.39752481473341,0,0,0,0,0.275118041940067,0,0.516833518338658,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0.673588117878509,0.225222960966644,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,0,0.67355336034844,0,0.302714855289863,0,0.468642863667593,0,0.570471821544449,0,0,0.161872944368132,0.561803226808994,0,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.538168907066586,0,0,0,0.206105058476878,0.772921620136887,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0.484938170456436,1.42003837006646,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0.609868530647977,0.265059536642971,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0.4115740113314,0,0,1.96565443335525,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0.927443239800615,0.234817388471643,0.433099343283221,0,0,0.790204397959275,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0,0,0.088048434013226,0,0.288239906833923,0.37872730027914,0.253991577168676,0.381988425558278,0,0,0.308482478109971,0,0,0.224262168690721,1.30788020649984,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.410952645100767,0.179060963239896,0.560425719967636,0,0.431255149719035,0.77005821767849,0,1.30139853857622,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0.686286847621712,0,0.431428401637234,0.106727557803444,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0.164254312027618,0,0.232420756919918,0.241718899183244,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0.902399225814824,0.15403067420883,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0.501689773854853,0,0,0.895499018888713,0.219259876645935,0.522870902049801,0,0.656029291399411,0,0.721287081534056,0.366277859273374,0.082509499920588,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0.290033387828457,0.170453254832202,0.267096106940212,0,0.576570202095319,0.638063562472921,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0,0.255897791311334,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0.421258456238981,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0.211107635297664,0.329294892959902,0,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0,0,0.822724546172388,0,0,0,0.320472213382419,0,0.490080431962063,0,0.577076851905779,0.0711418433484141,0.318852545457645,0,0.5745161103971,0,0,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0.37428108081644,0.293016358543788,0.970884173996107,0,0,0.47748896947538,0,1.22864280839693,0,1.26602474769461,0.222617410045812,0.494411622680279,0.63337622438398,1.39473591775749,0,0,0.102268682502155,0.246169610922139,0,0.0898683511473268,0,0.511572370226872,0.197286811273867,0,1.11136990144637,0.969332746095218,0.834912883456661,0,1.04171104434093,0,1.44999915086959,0.227586896570999,0.254253650292766,0.236387681767936,0.344743373241465,0.583209226766509,0.347249989866585,0.885741385813839,1.4471572635049,0,3.53853631779919,1.77328571372128,0,0,0.278847488557207,0.384751292518985,0.227884111694002,0.46112780877612,0.269272933229316,0.217294743844016,0.638002319463839,0.549585560411174,0,0,0,0.498635045700469,0.225595660617181,0,0,0,0,0.632994193584081,0,0,0,1.99052386215701,0.884575645033392,0,0,0,0.104421949505455,1.21322039365219,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.31593289814244,0.150323419414493,0,0,0,0.627865836814451,0,0,0.277349346026277,0,0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| ||
|short_description=p6@SMG6 | |||
}} | }} |
Latest revision as of 02:55, 19 September 2015
Short description: | p6@SMG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SMG6_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_ENST00000263073, NM_017575, uc002fub.1_5end |
EntrezGene: | SMG6 |
HGNC: | 17809 |
UniProt: | Q86US8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data