FFCP PHASE1:Hg19::chr4:8560319..8560343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27201 | |EntrezGene=27201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4528 | |HGNC=4528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-108bp_to_ENST00000503981_5end | |association_with_transcript=-108bp_to_ENST00000503981_5end | ||
|cluster_id=chr4:8560319..8560343,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_2_at_GPR78_5end | |description=CAGE_peak_2_at_GPR78_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!4.19e-16!3;CL:0002536!9.67e-11!2;CL:0002537!1.78e-09!5 | |ontology_enrichment_celltype=CL:0002541!4.19e-16!3;CL:0002536!9.67e-11!2;CL:0002537!1.78e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.40e-55;3!CL:0000349;9.14e-16;19!CL:0000135;3.25e-07;3!CL:0000388;3.25e-07;3 | |ontology_enrichment_celltype_v019=CL:0002541;2.40e-55;3!CL:0000349;9.14e-16;19!CL:0000135;3.25e-07;3!CL:0000388;3.25e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.40e-55,3;CL:0000349,9.14e-16,19;CL:0000135,3.35e-07,3;CL:0000388,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.56e-19;1!UBERON:0009143;5.14e-19;1 | |ontology_enrichment_development_v019=UBERON:0003124;1.56e-19;1!UBERON:0009143;5.14e-19;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.38e-33!14;UBERON:0000158!1.38e-33!14;UBERON:0000478!1.40e-22!24;UBERON:0003124!7.92e-18!7;UBERON:0000305!2.06e-17!7;UBERON:0000476!4.19e-16!3;UBERON:0000920!4.19e-16!3;UBERON:0004871!3.33e-15!8;UBERON:0005795!2.69e-09!22;UBERON:0004923!2.92e-08!57;UBERON:0000995!2.91e-07!21;UBERON:0003975!6.61e-07!22 | |ontology_enrichment_uberon=UBERON:0005631!1.38e-33!14;UBERON:0000158!1.38e-33!14;UBERON:0000478!1.40e-22!24;UBERON:0003124!7.92e-18!7;UBERON:0000305!2.06e-17!7;UBERON:0000476!4.19e-16!3;UBERON:0000920!4.19e-16!3;UBERON:0004871!3.33e-15!8;UBERON:0005795!2.69e-09!22;UBERON:0004923!2.92e-08!57;UBERON:0000995!2.91e-07!21;UBERON:0003975!6.61e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.40e-55;3!UBERON:0000920;2.40e-55;3!UBERON:0005631;1.53e-29;10!UBERON:0000158;1.53e-29;10!UBERON:0000478;4.01e-19;24!UBERON:0001043;3.25e-07;3!UBERON:0007846;3.25e-07;3!UBERON:0000043;3.25e-07;3!UBERON:0007845;3.25e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003124;2.40e-55;3!UBERON:0000920;2.40e-55;3!UBERON:0005631;1.53e-29;10!UBERON:0000158;1.53e-29;10!UBERON:0000478;4.01e-19;24!UBERON:0001043;3.25e-07;3!UBERON:0007846;3.25e-07;3!UBERON:0000043;3.25e-07;3!UBERON:0007845;3.25e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.40e-55,3;UBERON:0003124,5.24e-42,7;UBERON:0005631,1.29e-32,14;UBERON:0000158,1.29e-32,14;UBERON:0000478,4.01e-19,24;UBERON:0001043,3.16e-07,3;UBERON:0009143,3.16e-07,3;UBERON:0007846,3.35e-07,3;UBERON:0000043,3.35e-07,3;UBERON:0007845,3.35e-07,3;UBERON:0004923,5.41e-07,66 | |||
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|short_description=p2@GPR78 | |short_description=p2@GPR78 | ||
}} | }} |
Latest revision as of 02:54, 19 September 2015
Short description: | p2@GPR78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPR78_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -108bp_to_ENST00000503981_5end |
EntrezGene: | GPR78 |
HGNC: | 4528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.40e-55 | 3 |
extraembryonic cell | 9.14e-16 | 19 |
fibrocyte | 3.35e-07 | 3 |
tendon cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.40e-55 | 3 |
chorion | 5.24e-42 | 7 |
extraembryonic membrane | 1.29e-32 | 14 |
membranous layer | 1.29e-32 | 14 |
extraembryonic structure | 4.01e-19 | 24 |
esophagus | 3.16e-07 | 3 |
esophageal region | 3.16e-07 | 3 |
dense regular connective tissue | 3.35e-07 | 3 |
tendon | 3.35e-07 | 3 |
regular connective tissue | 3.35e-07 | 3 |
organ component layer | 5.41e-07 | 66 |