FFCP PHASE1:Hg19::chr11:6341110..6341122,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112464 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9400 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=169bp_to_ENST00000532354_5end | |||
|cluster_id=chr11:6341110..6341122,- | |||
|description=CAGE_peak_6_at_PRKCDBP_5end | |||
|id=chr11:6341110..6341122,- | |||
|ontology_enrichment_celltype=CL:0000213!1.15e-09!57;CL:0000215!1.15e-09!57;CL:0000115!5.04e-09!35;CL:0000222!8.04e-09!119;CL:0002078!2.14e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:1000746;4.79e-09;7!CL:1000612;4.79e-09;7!CL:0002262;7.83e-09;2!CL:1000398;7.83e-09;2!CL:0002188;1.81e-07;5!CL:0000115;4.09e-07;36!CL:0002537;4.12e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,3.35e-09,7;CL:1000612,3.35e-09,7;CL:0002262,7.35e-09,2;CL:1000398,7.35e-09,2;CL:0000115,1.83e-08,36;CL:0002188,1.21e-07,5;CL:0002537,6.92e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!2.79e-07!113;UBERON:0000119!4.08e-07!312;UBERON:0002049!5.80e-07!79;UBERON:0007798!5.80e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;4.79e-09;7!UBERON:0001229;4.79e-09;7!UBERON:0001281;7.83e-09;2!UBERON:0003497;7.83e-09;2!UBERON:0003909;7.83e-09;2!UBERON:0003835;7.83e-09;2!UBERON:0000353;1.01e-08;15!UBERON:0000478;9.81e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,3.35e-09,7;UBERON:0000074,3.35e-09,7;UBERON:0001229,3.35e-09,7;UBERON:0001230,3.35e-09,7;UBERON:0003220,3.35e-09,7;UBERON:0005749,3.35e-09,7;UBERON:0004199,3.35e-09,7;UBERON:0004209,3.35e-09,7;UBERON:0004198,3.35e-09,7;UBERON:0001281,7.35e-09,2;UBERON:0003497,7.35e-09,2;UBERON:0003909,7.35e-09,2;UBERON:0003835,7.35e-09,2;UBERON:0000353,7.75e-09,15;UBERON:0005103,4.80e-08,8;UBERON:0000083,4.80e-08,8;UBERON:0009201,4.80e-08,8;UBERON:0006553,4.80e-08,8;UBERON:0003074,4.80e-08,8;UBERON:0003060,4.80e-08,8;UBERON:0001009,5.44e-08,112;UBERON:0004535,2.27e-07,109;UBERON:0000080,3.82e-07,9;UBERON:0002120,3.82e-07,9;UBERON:0004875,3.82e-07,9;UBERON:0005721,3.82e-07,9;UBERON:0005754,3.82e-07,9;UBERON:0007297,3.82e-07,9;UBERON:0000058,8.16e-07,19 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,0,0,0.872338524100369,2.53299878168311,0,0.261185628199839,0.491467873003018,0.697801167972428,0.655324116390517,0.791300934685361,0,0,0,1.20538905604795,1.46062018077475,0.975865597581014,0.738726348460727,0.816002764977012,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0.722878304769133,0,0.289693037921647,0,1.94653948121054,0.661743720148475,0.443458794925128,0.263504357079378,0.523916301990851,0.728590576585084,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.419499436209906,0.825354125820202,0.626984899610432,0,0.35576626268671,0.33472061276467,2.41697590265488,0,0.976248230192678,1.83831540172934,0,0.803697554556718,0.673588117878509,0.337834441449967,1.53316637465883,0.949265659568129,0.916008719652036,0,0,0,0,1.01304409331664,0.264818361626438,0.860509862246441,0,0,1.06748995729705,0.24666754841716,0,0.404132016209064,0,0.605429710579726,1.72852777344,0.234321431833797,0.624320153660641,0,0.149448680551801,0.469737994575059,0.647491777472526,0.702254033511242,0.204154171254893,0.368502951935304,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0.438977620880838,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,0,0.292311015483596,0.504867548488229,0.276149695926898,0.484938170456436,0,0.302256294682921,0,0,0.545492241181669,0.573609190778008,0.365921118388786,0,0.232387885739037,0.310983165046111,0.252320850875628,1.82488679537915,1.56449532329816,0,0,0,0.721879481669586,0,0.674338760312407,0,0.220587945464788,0,0.71181185733329,0.539325232640658,0.196221465125346,0,2.21446636387394,2.80483547606892,0,0,0,0,0,0,0,0.343135620597051,0.329250856225877,0,0.603173834469785,0.0925884451585296,1.62904152655162,0,0,0.34779121492523,0.117408694235822,1.15493158208859,0.462985512576611,0.761016608938393,0,0,0,0.702012795417713,0,0,0.335964256397719,0.141775097242386,0.447792613514241,0.581267877027924,0,0,0,0.207328115540772,0.288239906833923,0.37872730027914,0.444485260045183,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0,0.784917590417525,1.30788020649984,0.7333828582095,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0.823240336780769,1.30294473717494,0.355391948742546,0,0,0.871533458600294,0,0,0,0,0,0,0,0.868687840005475,0,0.537182889719687,0,0,0,0,0.254094624222463,0,0.773288812777695,0.670065061337395,0,0,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,0,0.473107245101804,0,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0.979005787313703,1.02943027143257,0,0,0,0.606255142892519,0,1.5119514666484,0.248107807818777,0,0.841980283299221,0.256278298511402,0.511707249066704,0,0,1.23367755042124,0.177561725313127,0.821271560138091,0,0.697262270759755,0,0.200506470303285,0,0.34444334449382,0.182091168006717,0.786746489756545,0.451199612907412,0.15403067420883,0,0,0,3.4120015221269,1.70093705276516,0.863663664408557,6.16909010761157,0.541892875087706,3.01013864312912,0.509752546090077,0,0.671624264166535,0,0,0.512900250232778,0,0,0.309123034943167,0,0.082509499920588,0,0.650060246036521,0,0.48335359146061,0.924291702687866,0.15350367472613,0,0.322260734604821,0.145016693914229,0.255679882248303,0.712256285173899,0.495854746082934,0,0,0.50578890427775,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0,0.572499546967965,0.744316738719335,0,0,1.02359116524534,0.42793898803392,0.636406495851874,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.409499734223957,0.565621727814851,0,1.10273068709225,0,0.876901770507525,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,1.04980416073495,0.384888450902048,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.586032717087576,0,0,0.568272293612826,1.19372242368845,0.890894042497916,2.15012491469462,0.994147647766298,0.844016498463076,0.111308705022906,0.494411622680279,0,0.19924798825107,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0.341380344856499,0,0,0,0,0,0,0.120596438625408,0,0.774054819518572,0,0.219385397153973,0,0,0.615602068030377,0.227884111694002,0,0.0897576444097721,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,5.33738031625119,4.4483018020741,3.23708043466912,0.06740113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| |||
|short_description=p6@PRKCDBP | |||
}} |
Latest revision as of 23:45, 18 September 2015
Short description: | p6@PRKCDBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRKCDBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 169bp_to_ENST00000532354_5end |
EntrezGene: | PRKCDBP |
HGNC: | 9400 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 3.35e-09 | 7 |
kidney corpuscule cell | 3.35e-09 | 7 |
endothelial cell of sinusoid | 7.35e-09 | 2 |
endothelial cell of hepatic sinusoid | 7.35e-09 | 2 |
endothelial cell | 1.83e-08 | 36 |
glomerular endothelial cell | 1.21e-07 | 5 |
amnion mesenchymal stem cell | 6.92e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 3.35e-09 | 7 |
renal glomerulus | 3.35e-09 | 7 |
renal corpuscle | 3.35e-09 | 7 |
glomerular capsule | 3.35e-09 | 7 |
metanephric mesenchyme | 3.35e-09 | 7 |
glomerular tuft | 3.35e-09 | 7 |
S-shaped body | 3.35e-09 | 7 |
renal vesicle | 3.35e-09 | 7 |
comma-shaped body | 3.35e-09 | 7 |
hepatic sinusoid | 7.35e-09 | 2 |
abdomen blood vessel | 7.35e-09 | 2 |
sinusoid | 7.35e-09 | 2 |
abdominal segment blood vessel | 7.35e-09 | 2 |
parenchyma | 7.75e-09 | 15 |
mesonephric epithelium | 4.80e-08 | 8 |
mesonephric tubule | 4.80e-08 | 8 |
nephric duct | 4.80e-08 | 8 |
renal duct | 4.80e-08 | 8 |
mesonephric duct | 4.80e-08 | 8 |
pronephric duct | 4.80e-08 | 8 |
circulatory system | 5.44e-08 | 112 |
cardiovascular system | 2.27e-07 | 109 |
mesonephros | 3.82e-07 | 9 |
pronephros | 3.82e-07 | 9 |
nephrogenic cord | 3.82e-07 | 9 |
pronephric mesoderm | 3.82e-07 | 9 |
rostral part of nephrogenic cord | 3.82e-07 | 9 |
presumptive pronephric mesoderm | 3.82e-07 | 9 |
duct | 8.16e-07 | 19 |