FFCP PHASE1:Hg19::chr12:52779433..52779437,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3890 | |EntrezGene=3890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6461 | |HGNC=6461 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NSB2 | |UniProt=Q9NSB2 | ||
|association_with_transcript=0bp_to_ENST00000257951_5end | |association_with_transcript=0bp_to_ENST00000257951_5end | ||
|cluster_id=chr12:52779433..52779437,- | |||
|coexpression_cluster_id=C263 | |coexpression_cluster_id=C263 | ||
|description=CAGE_peak_1_at_KRT84_5end | |description=CAGE_peak_1_at_KRT84_5end | ||
|id=chr12:52779433..52779437,- | |id=chr12:52779433..52779437,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;8.28e-14;2!UBERON:0010056;8.28e-14;2 | |||
|ontology_enrichment_disease=DOID:3151!5.53e-17!1;DOID:3149!5.53e-17!1;DOID:3451!3.71e-09!2;DOID:4159!3.71e-09!2;DOID:0060122!3.71e-09!2 | |ontology_enrichment_disease=DOID:3151!5.53e-17!1;DOID:3149!5.53e-17!1;DOID:3451!3.71e-09!2;DOID:4159!3.71e-09!2;DOID:0060122!3.71e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3151;2.78e-26;1!DOID:3149;2.78e-26;1!DOID:3451;7.30e-14;2!DOID:4159;7.30e-14;2!DOID:0060122;7.30e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.78e-26,1;DOID:3149,2.78e-26,1;DOID:3451,7.30e-14,2;DOID:4159,7.30e-14,2;DOID:0060122,7.30e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0001042!6.40e-25!10;UBERON:0009145!6.40e-25!10;UBERON:0006562!1.08e-22!11;UBERON:0001723!1.17e-21!3;UBERON:0001033!1.17e-21!3;UBERON:0010056!1.17e-21!3;UBERON:0007029!8.86e-17!1;UBERON:0008814!9.49e-17!15;UBERON:0002426!1.65e-16!1;UBERON:0003831!1.65e-16!1;UBERON:0003898!1.65e-16!1;UBERON:0004830!1.65e-16!1;UBERON:0001774!1.65e-16!1;UBERON:0003830!1.65e-16!1;UBERON:0005175!1.65e-16!1;UBERON:0003897!1.65e-16!1;UBERON:0001103!1.65e-16!1;UBERON:0010084!1.65e-16!1;UBERON:0000014!1.66e-16!4;UBERON:0002370!2.85e-16!4;UBERON:0005058!2.85e-16!4;UBERON:0009113!2.85e-16!4;UBERON:0003295!2.85e-16!4;UBERON:0005562!2.85e-16!4;UBERON:0001557!2.70e-13!19;UBERON:0000002!3.57e-11!6;UBERON:0001560!3.57e-11!6;UBERON:0003351!3.57e-11!6;UBERON:0004177!1.04e-09!7;UBERON:0001630!6.42e-09!2;UBERON:0005090!6.42e-09!2;UBERON:0000974!4.66e-07!10;UBERON:0003408!4.66e-07!10;UBERON:0005795!7.47e-07!22 | |ontology_enrichment_uberon=UBERON:0001042!6.40e-25!10;UBERON:0009145!6.40e-25!10;UBERON:0006562!1.08e-22!11;UBERON:0001723!1.17e-21!3;UBERON:0001033!1.17e-21!3;UBERON:0010056!1.17e-21!3;UBERON:0007029!8.86e-17!1;UBERON:0008814!9.49e-17!15;UBERON:0002426!1.65e-16!1;UBERON:0003831!1.65e-16!1;UBERON:0003898!1.65e-16!1;UBERON:0004830!1.65e-16!1;UBERON:0001774!1.65e-16!1;UBERON:0003830!1.65e-16!1;UBERON:0005175!1.65e-16!1;UBERON:0003897!1.65e-16!1;UBERON:0001103!1.65e-16!1;UBERON:0010084!1.65e-16!1;UBERON:0000014!1.66e-16!4;UBERON:0002370!2.85e-16!4;UBERON:0005058!2.85e-16!4;UBERON:0009113!2.85e-16!4;UBERON:0003295!2.85e-16!4;UBERON:0005562!2.85e-16!4;UBERON:0001557!2.70e-13!19;UBERON:0000002!3.57e-11!6;UBERON:0001560!3.57e-11!6;UBERON:0003351!3.57e-11!6;UBERON:0004177!1.04e-09!7;UBERON:0001630!6.42e-09!2;UBERON:0005090!6.42e-09!2;UBERON:0000974!4.66e-07!10;UBERON:0003408!4.66e-07!10;UBERON:0005795!7.47e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.24e-49;2!UBERON:0005058;1.24e-49;2!UBERON:0009113;1.24e-49;2!UBERON:0001723;5.51e-34;3!UBERON:0001033;5.51e-34;3!UBERON:0007029;5.93e-26;1!UBERON:0000014;8.66e-26;4!UBERON:0005795;1.11e-25;1!UBERON:0004177;1.41e-20;5!UBERON:0005057;1.41e-20;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001042,1.06e-39,10;UBERON:0009145,1.06e-39,10;UBERON:0006562,3.71e-36,11;UBERON:0001723,5.51e-34,3;UBERON:0001033,5.51e-34,3;UBERON:0010056,5.51e-34,3;UBERON:0007029,5.93e-26,1;UBERON:0000014,8.66e-26,4;UBERON:0002370,2.08e-25,4;UBERON:0005058,2.08e-25,4;UBERON:0009113,2.08e-25,4;UBERON:0003295,2.08e-25,4;UBERON:0005562,2.08e-25,4;UBERON:0008814,2.40e-22,18;UBERON:0001557,3.35e-21,19;UBERON:0003351,2.58e-17,6;UBERON:0004177,5.41e-15,7;UBERON:0005057,5.41e-15,7;UBERON:0000974,8.47e-11,10;UBERON:0003408,8.47e-11,10;UBERON:0009722,6.63e-10,11;UBERON:0007690,6.63e-10,11;UBERON:0000072,7.50e-09,47;UBERON:0000065,9.43e-08,54;UBERON:0000153,8.52e-07,62;UBERON:0007811,8.52e-07,62 | |||
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|short_description=p1@KRT84 | |short_description=p1@KRT84 | ||
}} | }} |
Latest revision as of 22:31, 18 September 2015
Short description: | p1@KRT84 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT84_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | 0bp_to_ENST00000257951_5end |
EntrezGene: | KRT84 |
HGNC: | 6461 |
UniProt: | Q9NSB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chordate pharynx | 1.06e-39 | 10 |
pharyngeal region of foregut | 1.06e-39 | 10 |
pharynx | 3.71e-36 | 11 |
tongue | 5.51e-34 | 3 |
gustatory system | 5.51e-34 | 3 |
future tongue | 5.51e-34 | 3 |
surface | 5.93e-26 | 1 |
zone of skin | 8.66e-26 | 4 |
thymus | 2.08e-25 | 4 |
hemolymphoid system gland | 2.08e-25 | 4 |
thymic region | 2.08e-25 | 4 |
pharyngeal gland | 2.08e-25 | 4 |
thymus primordium | 2.08e-25 | 4 |
pharyngeal arch system | 2.40e-22 | 18 |
upper respiratory tract | 3.35e-21 | 19 |
pharyngeal epithelium | 2.58e-17 | 6 |
hemopoietic organ | 5.41e-15 | 7 |
immune organ | 5.41e-15 | 7 |
neck | 8.47e-11 | 10 |
gland of gut | 8.47e-11 | 10 |
entire pharyngeal arch endoderm | 6.63e-10 | 11 |
early pharyngeal endoderm | 6.63e-10 | 11 |
segment of respiratory tract | 7.50e-09 | 47 |
respiratory tract | 9.43e-08 | 54 |
anterior region of body | 8.52e-07 | 62 |
craniocervical region | 8.52e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.78e-26 | 1 |
keratoacanthoma | 2.78e-26 | 1 |
skin carcinoma | 7.30e-14 | 2 |
skin cancer | 7.30e-14 | 2 |
integumentary system cancer | 7.30e-14 | 2 |