FFCP PHASE1:Hg19::chr1:179112189..179112219,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:179112189..179112219,- to FFCP PHASE1:Hg19::chr1:179112189..179112219,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27 | |EntrezGene=27 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=77 | |HGNC=77 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000504324,ENST00000508127,ENST00000509520,ENST00000512653,uc001gmg.3,uc001gmh.3,uc001gmi.3,uc001gmk.2,uc009wxf.1,uc010pne.1_5end | |||
|cluster_id=chr1:179112189..179112219,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_ABL2_5end | |||
|id=chr1:179112189..179112219,- | |||
|ontology_enrichment_celltype=CL:0000548!3.96e-27!679;CL:0000004!3.96e-27!679;CL:0000255!3.96e-27!679;CL:0000012!2.05e-26!682;CL:0000144!8.55e-23!625;CL:0002371!2.11e-22!591;CL:0000222!4.06e-19!119;CL:0000055!5.45e-17!180;CL:0000063!1.80e-16!578;CL:0000220!1.53e-15!246;CL:0002321!9.14e-15!248;CL:0000003!1.97e-14!722;CL:0000213!3.71e-13!57;CL:0000215!3.71e-13!57;CL:0002139!1.86e-10!24;CL:0002009!1.88e-10!65;CL:0000557!3.98e-10!71;CL:0000076!8.81e-10!62;CL:0002194!1.51e-09!63;CL:0000576!1.51e-09!63;CL:0000040!1.51e-09!63;CL:0000559!1.51e-09!63;CL:0000115!2.24e-09!35;CL:0002057!2.38e-09!42;CL:0000057!3.41e-09!75;CL:0002078!6.56e-09!44;CL:0000839!1.00e-08!70;CL:0000860!1.18e-08!45;CL:0000066!2.08e-08!254;CL:0000071!4.78e-08!18;CL:0002546!4.78e-08!18;CL:0002620!1.63e-07!23;CL:0000680!2.24e-07!57;CL:0000056!2.24e-07!57;CL:0000355!2.24e-07!57;CL:0000048!2.94e-07!430;CL:0000723!4.06e-07!436;CL:0000766!5.25e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-13;33!CL:0002057;1.08e-13;33!CL:0000473;2.00e-12;39!CL:0000234;2.00e-12;39!CL:0002139;9.62e-11;24!CL:0000115;9.53e-09;36!CL:0000071;2.86e-08;18!CL:0000213;3.72e-08;58!CL:0000215;3.72e-08;58!CL:0002620;1.08e-07;23!CL:0002078;9.95e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.76e-20,121;CL:0002321,8.41e-16,250;CL:0000213,7.37e-14,58;CL:0000215,7.37e-14,58;CL:0002009,9.85e-11,61;CL:0002139,9.85e-11,24;CL:0000473,1.57e-10,48;CL:0000234,1.57e-10,48;CL:0000557,1.91e-10,67;CL:0000076,2.86e-10,63;CL:0000115,7.55e-10,36;CL:0002194,8.76e-10,59;CL:0000576,8.76e-10,59;CL:0000040,8.76e-10,59;CL:0000559,8.76e-10,59;CL:0002078,1.84e-09,45;CL:0000057,2.17e-09,76;CL:0000860,3.28e-09,42;CL:0002057,3.28e-09,42;CL:0000839,4.86e-09,66;CL:0000066,5.93e-09,253;CL:0000071,3.00e-08,18;CL:0002546,3.00e-08,18;CL:0000048,7.97e-08,427;CL:0000723,9.47e-08,433;CL:0002620,1.06e-07,23;CL:0000680,1.35e-07,58;CL:0000056,1.35e-07,58;CL:0000355,1.35e-07,58;CL:0000766,2.15e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002546;2.86e-08;18!CL:0002057;1.61e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.04e-15!167;UBERON:0000926!3.76e-15!448;UBERON:0004120!3.76e-15!448;UBERON:0006603!3.76e-15!448;UBERON:0000467!9.66e-15!625;UBERON:0000480!1.99e-14!626;UBERON:0002049!1.86e-13!79;UBERON:0007798!1.86e-13!79;UBERON:0000468!1.70e-12!659;UBERON:0000055!9.92e-12!69;UBERON:0003081!1.41e-11!216;UBERON:0001981!9.28e-11!60;UBERON:0007500!9.28e-11!60;UBERON:0004537!9.28e-11!60;UBERON:0006965!9.28e-11!60;UBERON:0004765!2.98e-10!101;UBERON:0001434!2.98e-10!101;UBERON:0002371!7.72e-10!80;UBERON:0001474!2.68e-09!86;UBERON:0004872!2.97e-09!84;UBERON:0001637!3.12e-09!42;UBERON:0003509!3.12e-09!42;UBERON:0004572!3.12e-09!42;UBERON:0000914!5.03e-09!83;UBERON:0002329!5.03e-09!83;UBERON:0003077!5.03e-09!83;UBERON:0003059!5.03e-09!83;UBERON:0007282!5.03e-09!83;UBERON:0009618!5.03e-09!83;UBERON:0007285!5.03e-09!83;UBERON:0000486!1.18e-08!82;UBERON:0000923!1.54e-08!604;UBERON:0005291!1.54e-08!604;UBERON:0006598!1.54e-08!604;UBERON:0002532!1.54e-08!604;UBERON:0002050!1.84e-08!605;UBERON:0005423!1.84e-08!605;UBERON:0001986!4.78e-08!18;UBERON:0004638!4.78e-08!18;UBERON:0004852!4.78e-08!18;UBERON:0000487!5.10e-08!22;UBERON:0004290!5.16e-08!70;UBERON:0000062!8.89e-08!511;UBERON:0006914!1.81e-07!25;UBERON:0004573!2.00e-07!33;UBERON:0004571!2.00e-07!33;UBERON:0000490!2.37e-07!138;UBERON:0000922!3.62e-07!612;UBERON:0002097!3.77e-07!40;UBERON:0004535!4.60e-07!110;UBERON:0003914!6.63e-07!118;UBERON:0003102!7.28e-07!95;UBERON:0002199!8.26e-07!45;UBERON:0002416!8.26e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.86e-08;18!UBERON:0001986;2.86e-08;18!UBERON:0004852;2.86e-08;18!UBERON:0000487;3.11e-08;22!UBERON:0006914;8.92e-08;25!UBERON:0001637;1.27e-07;42!UBERON:0003509;1.27e-07;42!UBERON:0004572;1.27e-07;42!UBERON:0007500;1.82e-07;56!UBERON:0001981;1.82e-07;56!UBERON:0004537;1.82e-07;56!UBERON:0000055;2.29e-07;65!UBERON:0004573;3.27e-07;33!UBERON:0004571;3.27e-07;33!UBERON:0002049;7.84e-07;75!UBERON:0007798;7.84e-07;75 | |||
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| ||
|short_description=p1@ABL2 | |||
}} | }} |
Latest revision as of 22:12, 18 September 2015
Short description: | p1@ABL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABL2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000504324, ENST00000508127, ENST00000509520, ENST00000512653, uc001gmg.3, uc001gmh.3, uc001gmi.3, uc001gmk.2, uc009wxf.1, uc010pne.1_5end |
EntrezGene: | ABL2 |
HGNC: | 77 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.76e-20 | 121 |
embryonic cell | 8.41e-16 | 250 |
lining cell | 7.37e-14 | 58 |
barrier cell | 7.37e-14 | 58 |
macrophage dendritic cell progenitor | 9.85e-11 | 61 |
endothelial cell of vascular tree | 9.85e-11 | 24 |
defensive cell | 1.57e-10 | 48 |
phagocyte | 1.57e-10 | 48 |
granulocyte monocyte progenitor cell | 1.91e-10 | 67 |
squamous epithelial cell | 2.86e-10 | 63 |
endothelial cell | 7.55e-10 | 36 |
monopoietic cell | 8.76e-10 | 59 |
monocyte | 8.76e-10 | 59 |
monoblast | 8.76e-10 | 59 |
promonocyte | 8.76e-10 | 59 |
meso-epithelial cell | 1.84e-09 | 45 |
fibroblast | 2.17e-09 | 76 |
classical monocyte | 3.28e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.28e-09 | 42 |
myeloid lineage restricted progenitor cell | 4.86e-09 | 66 |
epithelial cell | 5.93e-09 | 253 |
blood vessel endothelial cell | 3.00e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.00e-08 | 18 |
multi fate stem cell | 7.97e-08 | 427 |
somatic stem cell | 9.47e-08 | 433 |
skin fibroblast | 1.06e-07 | 23 |
muscle precursor cell | 1.35e-07 | 58 |
myoblast | 1.35e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.35e-07 | 58 |
myeloid leukocyte | 2.15e-07 | 72 |