FFCP PHASE1:Hg19::chrX:105066499..105066514,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203447 | |EntrezGene=203447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25391 | |HGNC=25391 | ||
|TSSclassifier=strong | |||
|UniProt=F5H049,Q7Z2Y5 | |UniProt=F5H049,Q7Z2Y5 | ||
|association_with_transcript=-21bp_to_ENST00000243300,ENST00000428173,NM_198465,uc004emd.2,uc010npc.1_5end | |association_with_transcript=-21bp_to_ENST00000243300,ENST00000428173,NM_198465,uc004emd.2,uc010npc.1_5end | ||
|cluster_id=chrX:105066499..105066514,+ | |||
|coexpression_cluster_id=C1194 | |coexpression_cluster_id=C1194 | ||
|description=CAGE_peak_2_at_NRK_5end | |description=CAGE_peak_2_at_NRK_5end | ||
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|ontology_enrichment_celltype=CL:1000449!2.54e-10!16;CL:1000507!3.98e-09!12;CL:1000494!3.98e-09!12;CL:1000497!1.47e-08!18;CL:0002518!1.47e-08!18;CL:0002681!6.11e-08!13;CL:0002584!6.11e-08!13;CL:0000188!9.67e-07!9 | |ontology_enrichment_celltype=CL:1000449!2.54e-10!16;CL:1000507!3.98e-09!12;CL:1000494!3.98e-09!12;CL:1000497!1.47e-08!18;CL:0002518!1.47e-08!18;CL:0002681!6.11e-08!13;CL:0002584!6.11e-08!13;CL:0000188!9.67e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.02e-14;15!CL:1000507;5.48e-14;10!CL:1000494;5.48e-14;10!CL:1000497;1.60e-12;17!CL:0002518;1.60e-12;17!CL:0002681;4.91e-11;12!CL:0002584;4.91e-11;12!CL:0000188;4.63e-10;9 | |ontology_enrichment_celltype_v019=CL:1000449;1.02e-14;15!CL:1000507;5.48e-14;10!CL:1000494;5.48e-14;10!CL:1000497;1.60e-12;17!CL:0002518;1.60e-12;17!CL:0002681;4.91e-11;12!CL:0002584;4.91e-11;12!CL:0000188;4.63e-10;9 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,8.82e-15,15;CL:1000507,4.27e-14,10;CL:1000494,4.27e-14,10;CL:1000497,1.41e-12,17;CL:0002518,1.41e-12,17;CL:0002681,5.01e-11,12;CL:0002584,5.01e-11,12;CL:0000188,4.36e-10,9;CL:0000393,1.71e-09,61;CL:0000211,1.71e-09,61;CL:0000187,1.41e-08,55;CL:0000680,8.46e-08,58;CL:0000056,8.46e-08,58;CL:0000355,8.46e-08,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@NRK | |short_description=p2@NRK | ||
}} | }} |
Latest revision as of 21:40, 18 September 2015
Short description: | p2@NRK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NRK_5end |
Coexpression cluster: | C1194_skeletal_large_diaphragm_throat_trachea_testicular_tongue |
Association with transcript: | -21bp_to_ENST00000243300, ENST00000428173, NM_198465, uc004emd.2, uc010npc.1_5end |
EntrezGene: | NRK |
HGNC: | 25391 |
UniProt: | F5H049Q7Z2Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 8.82e-15 | 15 |
kidney tubule cell | 4.27e-14 | 10 |
nephron tubule epithelial cell | 4.27e-14 | 10 |
kidney cell | 1.41e-12 | 17 |
kidney epithelial cell | 1.41e-12 | 17 |
kidney cortical cell | 5.01e-11 | 12 |
renal cortical epithelial cell | 5.01e-11 | 12 |
cell of skeletal muscle | 4.36e-10 | 9 |
electrically responsive cell | 1.71e-09 | 61 |
electrically active cell | 1.71e-09 | 61 |
muscle cell | 1.41e-08 | 55 |
muscle precursor cell | 8.46e-08 | 58 |
myoblast | 8.46e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.46e-08 | 58 |